Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_I06
         (473 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U51994-7|AAO21384.1|  429|Caenorhabditis elegans Elongation fact...    89   2e-18
U51994-6|AAA96068.1|  463|Caenorhabditis elegans Elongation fact...    89   2e-18
U40935-2|AAA81688.1|  463|Caenorhabditis elegans Elongation fact...    89   2e-18
Z92835-1|CAB07395.2|  532|Caenorhabditis elegans Hypothetical pr...    45   2e-05
Z81098-7|CAI79193.2|  592|Caenorhabditis elegans Hypothetical pr...    35   0.026
Z81098-6|CAB03180.3|  610|Caenorhabditis elegans Hypothetical pr...    35   0.026
Z78064-8|CAO82042.1|  357|Caenorhabditis elegans Hypothetical pr...    29   1.7  
Z19158-2|CAA79571.3|  262|Caenorhabditis elegans Hypothetical pr...    29   1.7  
AL033514-38|CAA22111.2|  341|Caenorhabditis elegans Hypothetical...    29   1.7  
AF036700-1|AAB88364.1|  258|Caenorhabditis elegans Hypothetical ...    27   6.9  
AC006708-23|AAF60414.1|  975|Caenorhabditis elegans Paz/piwi dom...    27   6.9  
AC024791-32|AAY55887.1|  212|Caenorhabditis elegans Hypothetical...    27   9.1  

>U51994-7|AAO21384.1|  429|Caenorhabditis elegans Elongation factor
           protein 4, isoformd protein.
          Length = 429

 Score = 88.6 bits (210), Expect = 2e-18
 Identities = 40/51 (78%), Positives = 46/51 (90%)
 Frame = +1

Query: 22  PKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 174
           PK +KSGDA IV L+P+KPLCVESF ++ PLGRFAVRDMRQTVAVGVIK+V
Sbjct: 357 PKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRFAVRDMRQTVAVGVIKSV 407


>U51994-6|AAA96068.1|  463|Caenorhabditis elegans Elongation factor
           protein 4, isoforma protein.
          Length = 463

 Score = 88.6 bits (210), Expect = 2e-18
 Identities = 40/51 (78%), Positives = 46/51 (90%)
 Frame = +1

Query: 22  PKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 174
           PK +KSGDA IV L+P+KPLCVESF ++ PLGRFAVRDMRQTVAVGVIK+V
Sbjct: 391 PKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRFAVRDMRQTVAVGVIKSV 441


>U40935-2|AAA81688.1|  463|Caenorhabditis elegans Elongation factor
           protein 3 protein.
          Length = 463

 Score = 88.6 bits (210), Expect = 2e-18
 Identities = 40/51 (78%), Positives = 46/51 (90%)
 Frame = +1

Query: 22  PKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 174
           PK +KSGDA IV L+P+KPLCVESF ++ PLGRFAVRDMRQTVAVGVIK+V
Sbjct: 391 PKFLKSGDAGIVELIPTKPLCVESFTDYAPLGRFAVRDMRQTVAVGVIKSV 441


>Z92835-1|CAB07395.2|  532|Caenorhabditis elegans Hypothetical
           protein H19N07.1 protein.
          Length = 532

 Score = 45.2 bits (102), Expect = 2e-05
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
 Frame = +1

Query: 25  KSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVG-VIKAV 174
           K +K  +  I+ L   +P  +E F+E+P LGRF +RD  +T+A+G V+K V
Sbjct: 481 KFVKQDEKCIMRLESPEPFVLEPFKEYPYLGRFTLRDEGKTIAIGKVLKVV 531


>Z81098-7|CAI79193.2|  592|Caenorhabditis elegans Hypothetical
           protein K07A12.4b protein.
          Length = 592

 Score = 35.1 bits (77), Expect = 0.026
 Identities = 16/56 (28%), Positives = 29/56 (51%)
 Frame = +1

Query: 7   LLEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 174
           +L+  P+ I  G +A+V +     + +E+F     LGR   R    T+A G+++ V
Sbjct: 533 ILKKGPRFIAKGASAVVEIETEYDIAIETFTSCRALGRVTFRAGGNTIAAGIVEKV 588


>Z81098-6|CAB03180.3|  610|Caenorhabditis elegans Hypothetical
           protein K07A12.4a protein.
          Length = 610

 Score = 35.1 bits (77), Expect = 0.026
 Identities = 16/56 (28%), Positives = 29/56 (51%)
 Frame = +1

Query: 7   LLEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 174
           +L+  P+ I  G +A+V +     + +E+F     LGR   R    T+A G+++ V
Sbjct: 551 ILKKGPRFIAKGASAVVEIETEYDIAIETFTSCRALGRVTFRAGGNTIAAGIVEKV 606


>Z78064-8|CAO82042.1|  357|Caenorhabditis elegans Hypothetical
           protein F57B1.9a protein.
          Length = 357

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 14/52 (26%), Positives = 27/52 (51%)
 Frame = -1

Query: 290 MKYRSCMKNCAVNSSSYFLPLVAFSAALVTLPPPASLKLTALMTPTATVCLM 135
           M Y +C    ++N   Y   L   ++A+V LPPP ++ +  ++   A  C++
Sbjct: 188 MMYNNCRYRYSLNVLHY--ELYCQTSAVVNLPPPKAISIMEIVIQFAIPCII 237


>Z19158-2|CAA79571.3|  262|Caenorhabditis elegans Hypothetical
           protein T23G5.3 protein.
          Length = 262

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 20/51 (39%), Positives = 25/51 (49%)
 Frame = -1

Query: 236 LPLVAFSAALVTLPPPASLKLTALMTPTATVCLMSRTAKRPRGGNSWKDST 84
           +P+V  +  L   PPP    L +LM P  TV +  R  K P G NS K  T
Sbjct: 129 VPIVPRNLLLSKPPPPPPPPLPSLMQPKDTVQIPMR--KPPTGRNSKKIKT 177


>AL033514-38|CAA22111.2|  341|Caenorhabditis elegans Hypothetical
           protein Y75B8A.33 protein.
          Length = 341

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +3

Query: 315 KRATNSFLFYIFYKACNVTLFYNLYKVIHNISETFC 422
           KR  NS++F I+   C +  F   Y++   +   +C
Sbjct: 262 KRDVNSYVFVIWGVVCQILFFLTTYRIAELVVRIYC 297


>AF036700-1|AAB88364.1|  258|Caenorhabditis elegans Hypothetical
           protein M04G7.1 protein.
          Length = 258

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = -1

Query: 176 LTALMTP-TATVCLMSRTAKRPRGGNSWKDSTHRG 75
           + AL  P T ++CL +   K P  GN+  D T RG
Sbjct: 174 MMALYCPRTCSLCLWAAATKIPNCGNTLPDCTTRG 208


>AC006708-23|AAF60414.1|  975|Caenorhabditis elegans Paz/piwi
           domain-containing protein2 protein.
          Length = 975

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +3

Query: 270 HTTAILHSPKGVSKEKRATNSFLFYIFYKACNVTLFYNL 386
           H TA L S K V+  K+    F+ +  ++ C+  LF+ L
Sbjct: 107 HITAELSSKKEVTFTKKGKEDFIVHDRHEKCSAILFHAL 145


>AC024791-32|AAY55887.1|  212|Caenorhabditis elegans Hypothetical
           protein Y47G6A.31 protein.
          Length = 212

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 375 FYNLYKVIHNISETFCYDC 431
           F +L K++ N   TFCY C
Sbjct: 44  FQHLPKLLENCGHTFCYSC 62


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,872,434
Number of Sequences: 27780
Number of extensions: 182104
Number of successful extensions: 520
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 520
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 860942358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)