Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_H09
         (401 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical p...   155   8e-39
AC006644-2|AAF39837.1|  118|Caenorhabditis elegans Hypothetical ...    54   4e-08
AC025721-13|AAR85897.1|  139|Caenorhabditis elegans Hypothetical...    34   0.033
U29382-6|AAF99998.1|  379|Caenorhabditis elegans Hypothetical pr...    27   3.8  
L14710-6|AAA28079.1|  227|Caenorhabditis elegans Hypothetical pr...    27   3.8  
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr...    27   5.0  
AC006795-2|AAF59493.3|  421|Caenorhabditis elegans Hypothetical ...    26   8.8  

>Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical
           protein F25H2.5 protein.
          Length = 153

 Score =  155 bits (377), Expect = 8e-39
 Identities = 71/105 (67%), Positives = 83/105 (79%)
 Frame = +1

Query: 85  ERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPGL 264
           ERTFI +KPDGV RGLVG II RFE++G+KLV LK +  S+  L+ HY DL  +PFFP L
Sbjct: 5   ERTFIAIKPDGVHRGLVGKIIARFEERGYKLVALKQMTASKAHLEVHYQDLKDKPFFPSL 64

Query: 265 VKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPTDSQPGTIRGDLC 399
           ++YMSSGPVV MVW+GL+VVK GR MLGATNP  S PGTIRGD C
Sbjct: 65  IEYMSSGPVVAMVWQGLDVVKQGRSMLGATNPLASAPGTIRGDFC 109


>AC006644-2|AAF39837.1|  118|Caenorhabditis elegans Hypothetical
           protein F55A3.6 protein.
          Length = 118

 Score = 54.0 bits (124), Expect = 4e-08
 Identities = 23/35 (65%), Positives = 28/35 (80%)
 Frame = +1

Query: 244 RPFFPGLVKYMSSGPVVPMVWEGLNVVKTGRQMLG 348
           +PFFP L+ YMSSGPVV M+WEG +VVK  R +LG
Sbjct: 33  KPFFPLLIDYMSSGPVVAMLWEGCDVVKRARVILG 67


>AC025721-13|AAR85897.1|  139|Caenorhabditis elegans Hypothetical
           protein Y48G8AL.15 protein.
          Length = 139

 Score = 34.3 bits (75), Expect = 0.033
 Identities = 19/69 (27%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
 Frame = +1

Query: 97  IMVKPDGV-QRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPGLVKY 273
           +++KP+ V  R L    +      G ++  ++ +  S  L +Q Y+    + F+  LV++
Sbjct: 14  VVLKPEIVAHRVLAQVALSELRSNGIEIEEMRQMKISGSLAKQLYAQHQGKFFYDRLVRH 73

Query: 274 MSSGPVVPM 300
           +SSGPV+ M
Sbjct: 74  ISSGPVIAM 82


>U29382-6|AAF99998.1|  379|Caenorhabditis elegans Hypothetical
           protein R03H10.1 protein.
          Length = 379

 Score = 27.5 bits (58), Expect = 3.8
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = +1

Query: 211 LLQQHYSDLASRPFFPGLVKYMSSGPVVPMVW 306
           LL + + ++ S   +PG V+++   P++P  W
Sbjct: 144 LLDRCWKNVDSMELYPGTVQFLDKLPIIPSNW 175


>L14710-6|AAA28079.1|  227|Caenorhabditis elegans Hypothetical
           protein K02D10.4 protein.
          Length = 227

 Score = 27.5 bits (58), Expect = 3.8
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +3

Query: 132 CGHHY*TFRKERLQTSRFEIRMAIRRTSP 218
           CGH        R +T +FE R+ ++R+SP
Sbjct: 107 CGHPVEVDDHHRRETKKFENRLTLKRSSP 135


>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical protein
            F12F6.6 protein.
          Length = 1126

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
 Frame = +1

Query: 238  ASRPFFPGLVKYMSSGPVVPMVWEGLNVVKTGRQML---GATNPTDSQPGTI 384
            AS  F      Y+    V+  VW G    +T  Q +   GATN  D++ GTI
Sbjct: 1003 ASSEFLENSKAYIIDNGVILFVWVGSACPQTWVQDVFGVGATNQIDTESGTI 1054


>AC006795-2|AAF59493.3|  421|Caenorhabditis elegans Hypothetical
           protein Y50D4B.6 protein.
          Length = 421

 Score = 26.2 bits (55), Expect = 8.8
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = +1

Query: 226 YSDLASRP-FFPGLVKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPTDSQP 375
           Y  L  RP +F GL+KY+  G  +P    G + +    Q     NP D +P
Sbjct: 332 YEGLDFRPDYFQGLMKYVRDGNQLPSPEHGSDKIYEFMQSCWNLNP-DKRP 381


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,061,720
Number of Sequences: 27780
Number of extensions: 175083
Number of successful extensions: 398
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 398
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 630384202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)