Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_H08
(395 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L15188-7|AAA27951.1| 161|Caenorhabditis elegans Ribosomal prote... 154 2e-38
Z83244-6|CAD18877.1| 502|Caenorhabditis elegans Hypothetical pr... 33 0.056
Z83244-5|CAB54315.1| 568|Caenorhabditis elegans Hypothetical pr... 33 0.056
Z83244-4|CAB54314.1| 562|Caenorhabditis elegans Hypothetical pr... 33 0.056
AC084197-45|AAK68589.4| 751|Caenorhabditis elegans Hypothetical... 30 0.52
Z81491-1|CAB04019.1| 181|Caenorhabditis elegans Hypothetical pr... 28 2.8
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 27 3.7
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 27 3.7
U61946-10|AAC24388.1| 1827|Caenorhabditis elegans Hypothetical p... 27 6.4
AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical ... 27 6.4
AL117193-4|CAB54984.1| 335|Caenorhabditis elegans Hypothetical ... 27 6.4
AL117193-3|CAB54983.1| 335|Caenorhabditis elegans Hypothetical ... 27 6.4
AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical ... 27 6.4
Z92775-2|CAB07162.2| 382|Caenorhabditis elegans Hypothetical pr... 26 8.5
Z92775-1|CAB07161.2| 379|Caenorhabditis elegans Hypothetical pr... 26 8.5
Z81526-4|CAB04267.2| 430|Caenorhabditis elegans Hypothetical pr... 26 8.5
X53244-1|CAA37334.1| 75|Caenorhabditis elegans metallothionein... 26 8.5
U64853-6|AAB04979.1| 75|Caenorhabditis elegans Metallothionein... 26 8.5
M92909-1|AAA28110.1| 75|Caenorhabditis elegans metallothionein... 26 8.5
D17364-1|BAA04180.1| 75|Caenorhabditis elegans metallothionein... 26 8.5
>L15188-7|AAA27951.1| 161|Caenorhabditis elegans Ribosomal protein,
large subunitprotein 21 protein.
Length = 161
Score = 154 bits (374), Expect = 2e-38
Identities = 69/101 (68%), Positives = 81/101 (80%)
Frame = +1
Query: 82 YLFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHAL 261
Y+FAR FR HG LSTY YK GD+VDI+ NGA QKGMP K YHG+TGR++NVT A+
Sbjct: 13 YMFARDFRKHGVEHLSTYYTQYKRGDLVDIKTNGAFQKGMPFKAYHGRTGRIFNVTRGAV 72
Query: 262 GVIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLXRVKENE 384
G+IVNKRVRG I+PKRINIR+EH+K SKCR DFL RVK N+
Sbjct: 73 GIIVNKRVRGNILPKRINIRIEHIKPSKCRTDFLNRVKSND 113
>Z83244-6|CAD18877.1| 502|Caenorhabditis elegans Hypothetical
protein W06F12.2c protein.
Length = 502
Score = 33.5 bits (73), Expect = 0.056
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = -1
Query: 230 PVFPWYTLCGIPF*TAPLPLMSTMSPTLYTFMYVESGIVPCVRNLR 93
PVFP Y+ G+P PLP +P M V+ + P V+NLR
Sbjct: 226 PVFPSYSRAGVPQTPIPLPPTQINTPYPIDPMEVQFTVQPKVKNLR 271
>Z83244-5|CAB54315.1| 568|Caenorhabditis elegans Hypothetical
protein W06F12.2b protein.
Length = 568
Score = 33.5 bits (73), Expect = 0.056
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = -1
Query: 230 PVFPWYTLCGIPF*TAPLPLMSTMSPTLYTFMYVESGIVPCVRNLR 93
PVFP Y+ G+P PLP +P M V+ + P V+NLR
Sbjct: 226 PVFPSYSRAGVPQTPIPLPPTQINTPYPIDPMEVQFTVQPKVKNLR 271
>Z83244-4|CAB54314.1| 562|Caenorhabditis elegans Hypothetical
protein W06F12.2a protein.
Length = 562
Score = 33.5 bits (73), Expect = 0.056
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = -1
Query: 230 PVFPWYTLCGIPF*TAPLPLMSTMSPTLYTFMYVESGIVPCVRNLR 93
PVFP Y+ G+P PLP +P M V+ + P V+NLR
Sbjct: 220 PVFPSYSRAGVPQTPIPLPPTQINTPYPIDPMEVQFTVQPKVKNLR 265
>AC084197-45|AAK68589.4| 751|Caenorhabditis elegans Hypothetical
protein Y73B6BL.1 protein.
Length = 751
Score = 30.3 bits (65), Expect = 0.52
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +3
Query: 147 QSWRHCRHQRQWCSSKGYATQSIPWKDRSRVQRDCSCSRCDCQQAC 284
Q RHC Q C S Y W+ RSRV +C+ + Q C
Sbjct: 366 QPVRHCSEQDATCDSPFYWCDMKLWRCRSRVVYGGNCTGYEGTQIC 411
>Z81491-1|CAB04019.1| 181|Caenorhabditis elegans Hypothetical
protein D1086.1 protein.
Length = 181
Score = 27.9 bits (59), Expect = 2.8
Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +3
Query: 204 TQSIPW--KDRSRVQRDCSCSRCDCQQACSRKDYTEA 308
T+ + W D+SR+ D C++ ++ C KD+ +A
Sbjct: 120 TECVQWYFSDKSRMSTDQKCAQFKAKKQCIEKDFGKA 156
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 27.5 bits (58), Expect = 3.7
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +3
Query: 240 QRDCSCS-RCDCQQACSRKDYTEAHQYPC*ACQ 335
++ C C+ R +C R YT+ QY C +CQ
Sbjct: 26 RQSCGCAPRVQPSCSCQRTTYTQPQQYSC-SCQ 57
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 27.5 bits (58), Expect = 3.7
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +3
Query: 240 QRDCSCS-RCDCQQACSRKDYTEAHQYPC*ACQ 335
++ C C+ R +C R YT+ QY C +CQ
Sbjct: 26 RQSCGCAPRVQPSCSCQRTTYTQPQQYSC-SCQ 57
>U61946-10|AAC24388.1| 1827|Caenorhabditis elegans Hypothetical
protein F47C12.1 protein.
Length = 1827
Score = 26.6 bits (56), Expect = 6.4
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 258 SRCDCQQACSRKDYTEAHQYPC*AC 332
S +C+QAC Y+ + PC AC
Sbjct: 1610 SASECKQACKTGTYSNSGLEPCSAC 1634
>AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.6 protein.
Length = 335
Score = 26.6 bits (56), Expect = 6.4
Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = +3
Query: 240 QRDCSCS-RCDCQQACSRKDYTEAHQYPC*ACQALQVQT 353
++ C C+ + +C R YT+ QY C VQT
Sbjct: 26 RQSCGCAPKIQPSCSCQRTTYTQPQQYSCSCQNTAPVQT 64
>AL117193-4|CAB54984.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.5 protein.
Length = 335
Score = 26.6 bits (56), Expect = 6.4
Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = +3
Query: 240 QRDCSCS-RCDCQQACSRKDYTEAHQYPC*ACQALQVQT 353
++ C C+ + +C R YT+ QY C VQT
Sbjct: 26 RQSCGCAPKVQPSCSCQRTTYTQPQQYSCSCQNTAPVQT 64
>AL117193-3|CAB54983.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.4 protein.
Length = 335
Score = 26.6 bits (56), Expect = 6.4
Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = +3
Query: 240 QRDCSCS-RCDCQQACSRKDYTEAHQYPC*ACQALQVQT 353
++ C C+ + +C R YT+ QY C VQT
Sbjct: 26 RQSCGCAPKVQPSCSCQRTTYTQPQQYSCSCQNTAPVQT 64
>AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.3 protein.
Length = 335
Score = 26.6 bits (56), Expect = 6.4
Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = +3
Query: 240 QRDCSCS-RCDCQQACSRKDYTEAHQYPC*ACQALQVQT 353
++ C C+ + +C R YT+ QY C VQT
Sbjct: 26 RQSCGCAPKIQPSCSCQRTTYTQPQQYSCSCQNTAPVQT 64
>Z92775-2|CAB07162.2| 382|Caenorhabditis elegans Hypothetical
protein C06H5.2 protein.
Length = 382
Score = 26.2 bits (55), Expect = 8.5
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = -3
Query: 384 LILFDSXKEVLSALGVLDMLNTDIDALRYNPSANTLVDNHTESMSSHVVHAT 229
LILFD+ K VL ++GVL + I+ L A L +TE + + ++
Sbjct: 200 LILFDALKNVLQSVGVLTTKSVLINWLPSVQIAEILEHFNTEILEDLTIKSS 251
>Z92775-1|CAB07161.2| 379|Caenorhabditis elegans Hypothetical
protein C06H5.1 protein.
Length = 379
Score = 26.2 bits (55), Expect = 8.5
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = -3
Query: 384 LILFDSXKEVLSALGVLDMLNTDIDALRYNPSANTLVDNHTESMSSHVVHAT 229
LILFD+ K VL ++GVL + I+ L A L +TE + + ++
Sbjct: 200 LILFDALKNVLQSVGVLTTKSVLINWLPSVQIAEILEHFNTEILEDLTIKSS 251
>Z81526-4|CAB04267.2| 430|Caenorhabditis elegans Hypothetical
protein F33H2.7 protein.
Length = 430
Score = 26.2 bits (55), Expect = 8.5
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +3
Query: 270 CQQACSRKDYTEAHQYPC 323
C C RKD+ HQ+ C
Sbjct: 50 CTLKCQRKDWKSCHQFEC 67
>X53244-1|CAA37334.1| 75|Caenorhabditis elegans metallothionein-I
protein.
Length = 75
Score = 26.2 bits (55), Expect = 8.5
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +3
Query: 246 DCSCSRCDCQQACSRKDYTEAHQ 314
DC C+ C C + D T HQ
Sbjct: 47 DCKCANCHCAEQKQCGDKTHQHQ 69
>U64853-6|AAB04979.1| 75|Caenorhabditis elegans Metallothionein
protein 1 protein.
Length = 75
Score = 26.2 bits (55), Expect = 8.5
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +3
Query: 246 DCSCSRCDCQQACSRKDYTEAHQ 314
DC C+ C C + D T HQ
Sbjct: 47 DCKCANCHCAEQKQCGDKTHQHQ 69
>M92909-1|AAA28110.1| 75|Caenorhabditis elegans metallothionein I
protein.
Length = 75
Score = 26.2 bits (55), Expect = 8.5
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +3
Query: 246 DCSCSRCDCQQACSRKDYTEAHQ 314
DC C+ C C + D T HQ
Sbjct: 47 DCKCANCHCAEQKQCGDKTHQHQ 69
>D17364-1|BAA04180.1| 75|Caenorhabditis elegans metallothionein-I
protein.
Length = 75
Score = 26.2 bits (55), Expect = 8.5
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +3
Query: 246 DCSCSRCDCQQACSRKDYTEAHQ 314
DC C+ C C + D T HQ
Sbjct: 47 DCKCANCHCAEQKQCGDKTHQHQ 69
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,962,742
Number of Sequences: 27780
Number of extensions: 185065
Number of successful extensions: 644
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 644
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 609015246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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