Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_H06
(652 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4, X... 288 1e-77
M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X iso... 288 1e-77
CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein. 288 1e-77
BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein. 288 1e-77
BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein. 288 1e-77
BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4, X... 288 1e-77
BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4, X... 288 1e-77
AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X ... 288 1e-77
M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar prot... 287 2e-77
BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein. 287 2e-77
M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y iso... 279 6e-75
BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein. 279 6e-75
BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4, Y... 279 6e-75
BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4, Y... 279 6e-75
AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y ... 279 6e-75
AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4, Y... 276 4e-74
AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4 pr... 262 6e-70
Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4 prot... 94 4e-19
AY358764-1|AAQ89124.1| 182|Homo sapiens EPQL1862 protein. 32 1.5
AK024165-1|BAB14843.1| 182|Homo sapiens protein ( Homo sapiens ... 31 3.6
AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens ... 30 8.2
AJ301497-1|CAC34202.1| 76|Homo sapiens T-cell receptor beta ch... 30 8.2
AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein. 30 8.2
>AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4,
X-linked X isoform variant protein.
Length = 263
Score = 288 bits (707), Expect = 1e-77
Identities = 132/198 (66%), Positives = 152/198 (76%)
Frame = +2
Query: 59 PKHGCWTNLAVCMHRDRQPVPTSCASACPWXIFLRNRLKYALTGNEVLKIVKQRLIKVDG 238
PKH L P P IFLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPHPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 239 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 418
KVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 75 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 134
Query: 419 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGT 598
+P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNLCM+TGG NLGR+G
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGV 194
Query: 599 IVSRERHPGSFDIVHIXD 652
I +RERHPGSFD+VH+ D
Sbjct: 195 ITNRERHPGSFDVVHVKD 212
Score = 89.0 bits (211), Expect = 1e-17
Identities = 39/47 (82%), Positives = 41/47 (87%)
Frame = +1
Query: 16 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLXDF 156
MARGPKKHLKR+ APK WMLDKL GV+AP PSTGPHKLRECLPL F
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPHPSTGPHKLRECLPLIIF 47
>M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X
isoform protein.
Length = 263
Score = 288 bits (706), Expect = 1e-77
Identities = 132/198 (66%), Positives = 152/198 (76%)
Frame = +2
Query: 59 PKHGCWTNLAVCMHRDRQPVPTSCASACPWXIFLRNRLKYALTGNEVLKIVKQRLIKVDG 238
PKH L P P IFLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 239 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 418
KVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 75 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 134
Query: 419 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGT 598
+P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNLCM+TGG NLGR+G
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGV 194
Query: 599 IVSRERHPGSFDIVHIXD 652
I +RERHPGSFD+VH+ D
Sbjct: 195 ITNRERHPGSFDVVHVKD 212
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +1
Query: 16 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLXDF 156
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL F
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIF 47
>CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein.
Length = 263
Score = 288 bits (706), Expect = 1e-77
Identities = 132/198 (66%), Positives = 152/198 (76%)
Frame = +2
Query: 59 PKHGCWTNLAVCMHRDRQPVPTSCASACPWXIFLRNRLKYALTGNEVLKIVKQRLIKVDG 238
PKH L P P IFLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 239 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 418
KVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 75 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 134
Query: 419 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGT 598
+P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNLCM+TGG NLGR+G
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGV 194
Query: 599 IVSRERHPGSFDIVHIXD 652
I +RERHPGSFD+VH+ D
Sbjct: 195 ITNRERHPGSFDVVHVKD 212
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +1
Query: 16 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLXDF 156
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL F
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIF 47
>BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 288 bits (706), Expect = 1e-77
Identities = 132/198 (66%), Positives = 152/198 (76%)
Frame = +2
Query: 59 PKHGCWTNLAVCMHRDRQPVPTSCASACPWXIFLRNRLKYALTGNEVLKIVKQRLIKVDG 238
PKH L P P IFLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 239 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 418
KVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 75 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 134
Query: 419 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGT 598
+P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNLCM+TGG NLGR+G
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGV 194
Query: 599 IVSRERHPGSFDIVHIXD 652
I +RERHPGSFD+VH+ D
Sbjct: 195 ITNRERHPGSFDVVHVKD 212
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +1
Query: 16 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLXDF 156
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL F
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIF 47
>BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 288 bits (706), Expect = 1e-77
Identities = 132/198 (66%), Positives = 152/198 (76%)
Frame = +2
Query: 59 PKHGCWTNLAVCMHRDRQPVPTSCASACPWXIFLRNRLKYALTGNEVLKIVKQRLIKVDG 238
PKH L P P IFLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 239 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 418
KVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 75 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 134
Query: 419 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGT 598
+P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNLCM+TGG NLGR+G
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGV 194
Query: 599 IVSRERHPGSFDIVHIXD 652
I +RERHPGSFD+VH+ D
Sbjct: 195 ITNRERHPGSFDVVHVKD 212
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +1
Query: 16 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLXDF 156
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL F
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIF 47
>BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 288 bits (706), Expect = 1e-77
Identities = 132/198 (66%), Positives = 152/198 (76%)
Frame = +2
Query: 59 PKHGCWTNLAVCMHRDRQPVPTSCASACPWXIFLRNRLKYALTGNEVLKIVKQRLIKVDG 238
PKH L P P IFLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 239 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 418
KVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 75 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 134
Query: 419 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGT 598
+P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNLCM+TGG NLGR+G
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGV 194
Query: 599 IVSRERHPGSFDIVHIXD 652
I +RERHPGSFD+VH+ D
Sbjct: 195 ITNRERHPGSFDVVHVKD 212
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +1
Query: 16 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLXDF 156
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL F
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIF 47
>BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 288 bits (706), Expect = 1e-77
Identities = 132/198 (66%), Positives = 152/198 (76%)
Frame = +2
Query: 59 PKHGCWTNLAVCMHRDRQPVPTSCASACPWXIFLRNRLKYALTGNEVLKIVKQRLIKVDG 238
PKH L P P IFLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 239 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 418
KVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 75 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 134
Query: 419 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGT 598
+P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNLCM+TGG NLGR+G
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGV 194
Query: 599 IVSRERHPGSFDIVHIXD 652
I +RERHPGSFD+VH+ D
Sbjct: 195 ITNRERHPGSFDVVHVKD 212
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +1
Query: 16 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLXDF 156
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL F
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIF 47
>AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X
isoform protein.
Length = 263
Score = 288 bits (706), Expect = 1e-77
Identities = 132/198 (66%), Positives = 152/198 (76%)
Frame = +2
Query: 59 PKHGCWTNLAVCMHRDRQPVPTSCASACPWXIFLRNRLKYALTGNEVLKIVKQRLIKVDG 238
PKH L P P IFLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 239 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 418
KVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 75 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 134
Query: 419 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGT 598
+P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNLCM+TGG NLGR+G
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGV 194
Query: 599 IVSRERHPGSFDIVHIXD 652
I +RERHPGSFD+VH+ D
Sbjct: 195 ITNRERHPGSFDVVHVKD 212
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +1
Query: 16 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLXDF 156
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL F
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIF 47
>M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar protein
mRNA, complete cds. ).
Length = 244
Score = 287 bits (704), Expect = 2e-77
Identities = 128/178 (71%), Positives = 148/178 (83%)
Frame = +2
Query: 119 PTSCASACPWXIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEK 298
P P IFLRNRLKYALTG+EV KI QR IK+DGKVRTD TYPAGFMDV+SI+K
Sbjct: 16 PHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDK 75
Query: 299 TNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLI 478
T E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K +P+LVTHD RTIRYPDPLI
Sbjct: 76 TGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLI 135
Query: 479 KVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIXD 652
KVND+IQ+D+ T KI DFIKF++GNLCM+TGG NLGR+G I +RERHPGSFD+VH+ D
Sbjct: 136 KVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKD 193
Score = 51.2 bits (117), Expect = 3e-06
Identities = 24/29 (82%), Positives = 25/29 (86%)
Frame = +1
Query: 70 MLDKLGGVYAPRPSTGPHKLRECLPLXDF 156
MLDKL GV+APRPS GPHKLRECLPL F
Sbjct: 1 MLDKLTGVFAPRPS-GPHKLRECLPLIIF 28
>BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein.
Length = 243
Score = 287 bits (704), Expect = 2e-77
Identities = 128/178 (71%), Positives = 148/178 (83%)
Frame = +2
Query: 119 PTSCASACPWXIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEK 298
P P IFLRNRLKYALTG+EV KI QR IK+DGKVRTD TYPAGFMDV+SI+K
Sbjct: 15 PHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDK 74
Query: 299 TNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLI 478
T E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K +P+LVTHD RTIRYPDPLI
Sbjct: 75 TGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLI 134
Query: 479 KVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIXD 652
KVND+IQ+D+ T KI DFIKF++GNLCM+TGG NLGR+G I +RERHPGSFD+VH+ D
Sbjct: 135 KVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKD 192
Score = 54.0 bits (124), Expect = 4e-07
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = +1
Query: 76 DKLGGVYAPRPSTGPHKLRECLPLXDF 156
DKL GV+APRPSTGPHKLRECLPL F
Sbjct: 1 DKLTGVFAPRPSTGPHKLRECLPLIIF 27
>M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y
isoform protein.
Length = 263
Score = 279 bits (684), Expect = 6e-75
Identities = 126/198 (63%), Positives = 150/198 (75%)
Frame = +2
Query: 59 PKHGCWTNLAVCMHRDRQPVPTSCASACPWXIFLRNRLKYALTGNEVLKIVKQRLIKVDG 238
PKH L P P +FLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 239 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 418
KVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G K
Sbjct: 75 KVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVK 134
Query: 419 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGT 598
+P+LVTHD RTIRYPDP+IKVND++Q+D+ T KI++FIKF++GNLCM+ GG NLGRVG
Sbjct: 135 GIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGV 194
Query: 599 IVSRERHPGSFDIVHIXD 652
I +RERHPGSFD+VH+ D
Sbjct: 195 ITNRERHPGSFDVVHVKD 212
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +1
Query: 16 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLXDF 156
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL F
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVF 47
>BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein.
Length = 262
Score = 279 bits (684), Expect = 6e-75
Identities = 126/198 (63%), Positives = 150/198 (75%)
Frame = +2
Query: 59 PKHGCWTNLAVCMHRDRQPVPTSCASACPWXIFLRNRLKYALTGNEVLKIVKQRLIKVDG 238
PKH L P P +FLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 14 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDG 73
Query: 239 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 418
KVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G K
Sbjct: 74 KVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVK 133
Query: 419 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGT 598
+P+LVTHD RTIRYPDP+IKVND++Q+D+ T KI++FIKF++GNLCM+ GG NLGRVG
Sbjct: 134 GIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGV 193
Query: 599 IVSRERHPGSFDIVHIXD 652
I +RERHPGSFD+VH+ D
Sbjct: 194 ITNRERHPGSFDVVHVKD 211
Score = 89.0 bits (211), Expect = 1e-17
Identities = 39/46 (84%), Positives = 41/46 (89%)
Frame = +1
Query: 19 ARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLXDF 156
ARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL F
Sbjct: 1 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVF 46
>BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 279 bits (684), Expect = 6e-75
Identities = 126/198 (63%), Positives = 150/198 (75%)
Frame = +2
Query: 59 PKHGCWTNLAVCMHRDRQPVPTSCASACPWXIFLRNRLKYALTGNEVLKIVKQRLIKVDG 238
PKH L P P +FLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 239 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 418
KVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G K
Sbjct: 75 KVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVK 134
Query: 419 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGT 598
+P+LVTHD RTIRYPDP+IKVND++Q+D+ T KI++FIKF++GNLCM+ GG NLGRVG
Sbjct: 135 GIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGV 194
Query: 599 IVSRERHPGSFDIVHIXD 652
I +RERHPGSFD+VH+ D
Sbjct: 195 ITNRERHPGSFDVVHVKD 212
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +1
Query: 16 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLXDF 156
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL F
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVF 47
>BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 279 bits (684), Expect = 6e-75
Identities = 126/198 (63%), Positives = 150/198 (75%)
Frame = +2
Query: 59 PKHGCWTNLAVCMHRDRQPVPTSCASACPWXIFLRNRLKYALTGNEVLKIVKQRLIKVDG 238
PKH L P P +FLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 239 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 418
KVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G K
Sbjct: 75 KVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVK 134
Query: 419 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGT 598
+P+LVTHD RTIRYPDP+IKVND++Q+D+ T KI++FIKF++GNLCM+ GG NLGRVG
Sbjct: 135 GIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGV 194
Query: 599 IVSRERHPGSFDIVHIXD 652
I +RERHPGSFD+VH+ D
Sbjct: 195 ITNRERHPGSFDVVHVKD 212
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +1
Query: 16 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLXDF 156
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL F
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVF 47
>AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y
isoform protein.
Length = 263
Score = 279 bits (684), Expect = 6e-75
Identities = 126/198 (63%), Positives = 150/198 (75%)
Frame = +2
Query: 59 PKHGCWTNLAVCMHRDRQPVPTSCASACPWXIFLRNRLKYALTGNEVLKIVKQRLIKVDG 238
PKH L P P +FLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 239 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 418
KVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G K
Sbjct: 75 KVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVK 134
Query: 419 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGT 598
+P+LVTHD RTIRYPDP+IKVND++Q+D+ T KI++FIKF++GNLCM+ GG NLGRVG
Sbjct: 135 GIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGV 194
Query: 599 IVSRERHPGSFDIVHIXD 652
I +RERHPGSFD+VH+ D
Sbjct: 195 ITNRERHPGSFDVVHVKD 212
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +1
Query: 16 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLXDF 156
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL F
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVF 47
>AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 Y isoform variant protein.
Length = 263
Score = 276 bits (677), Expect = 4e-74
Identities = 125/198 (63%), Positives = 149/198 (75%)
Frame = +2
Query: 59 PKHGCWTNLAVCMHRDRQPVPTSCASACPWXIFLRNRLKYALTGNEVLKIVKQRLIKVDG 238
PKH L P P +FLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 239 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 418
KVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G K
Sbjct: 75 KVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVK 134
Query: 419 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGT 598
+P+LVTHD RTIRYPDP+IKVND++Q+D+ T KI++FIKF++GNLCM+ GG NLGRVG
Sbjct: 135 GIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGV 194
Query: 599 IVSRERHPGSFDIVHIXD 652
I +RERHPGSF +VH+ D
Sbjct: 195 ITNRERHPGSFGVVHVKD 212
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +1
Query: 16 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLXDF 156
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL F
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVF 47
>AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4
protein.
Length = 263
Score = 262 bits (643), Expect = 6e-70
Identities = 119/198 (60%), Positives = 144/198 (72%)
Frame = +2
Query: 59 PKHGCWTNLAVCMHRDRQPVPTSCASACPWXIFLRNRLKYALTGNEVLKIVKQRLIKVDG 238
PKH L P P +FLRNRLKYALTG+EV KI Q +K+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQHFLKIDG 74
Query: 239 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 418
KVR D TYPAGF+DV+SIEKT E FRL+Y+ KG F +HRIT EEAKYKLCKV+++ G K
Sbjct: 75 KVRVDITYPAGFIDVISIEKTGEHFRLVYNTKGCFAVHRITVEEAKYKLCKVRKITVGTK 134
Query: 419 NVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGT 598
+P+LVTHD RTIRYPDPLIKVND++Q+D+ T KI FIKF++GN+CM+ G NLGRVG
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNVCMVIAGANLGRVGV 194
Query: 599 IVSRERHPGSFDIVHIXD 652
I +RERHPGS D+VH+ D
Sbjct: 195 ITNRERHPGSCDVVHVKD 212
Score = 91.1 bits (216), Expect = 3e-18
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +1
Query: 16 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLXDF 156
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL F
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVF 47
>Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4
protein.
Length = 59
Score = 93.9 bits (223), Expect = 4e-19
Identities = 42/59 (71%), Positives = 46/59 (77%)
Frame = +1
Query: 16 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLXDFPEESSEVCFDRK 192
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL F + DR+
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALDRR 59
>AY358764-1|AAQ89124.1| 182|Homo sapiens EPQL1862 protein.
Length = 182
Score = 32.3 bits (70), Expect = 1.5
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 257 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 403
+YPA + D I + E+FRL+ + + RI + K C ++RV
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRRICASASAPKTCSIERV 144
>AK024165-1|BAB14843.1| 182|Homo sapiens protein ( Homo sapiens
cDNA FLJ14103 fis, clone MAMMA1001073. ).
Length = 182
Score = 31.1 bits (67), Expect = 3.6
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +2
Query: 257 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 403
+YPA + D I + E+FRL+ + + +I + K C ++RV
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRKICASASAPKTCSIERV 144
>AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens
cDNA FLJ43045 fis, clone BRTHA3003490. ).
Length = 1253
Score = 29.9 bits (64), Expect = 8.2
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +2
Query: 167 RLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGF-MDVVSIEKTNELFRLIYDVKGRF 343
+++Y L E+ KQRLIK D +++T + PA +++ I + + + + D + +
Sbjct: 39 KIEYRLLKEEIANREKQRLIKSD-QLKTSSSSPANSDVEIDGIGRIAMVTKQVTDAESKL 97
Query: 344 TIHRI 358
HRI
Sbjct: 98 KKHRI 102
>AJ301497-1|CAC34202.1| 76|Homo sapiens T-cell receptor beta chain
VJ region protein.
Length = 76
Score = 29.9 bits (64), Expect = 8.2
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 248 TDPTYPAGFM-DVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATG 412
++ TY +GF+ D I + N F + T+ ++PE++ LC V RV TG
Sbjct: 10 SEATYESGFVIDKFPISRPNLTFSTL-------TVSNMSPEDSSIYLCSVLRVVTG 58
>AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein.
Length = 1919
Score = 29.9 bits (64), Expect = 8.2
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +2
Query: 167 RLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGF-MDVVSIEKTNELFRLIYDVKGRF 343
+++Y L E+ KQRLIK D +++T + PA +++ I + + + + D + +
Sbjct: 784 KIEYRLLKEEIANREKQRLIKSD-QLKTSSSSPANSDVEIDGIGRIAMVTKQVTDAESKL 842
Query: 344 TIHRI 358
HRI
Sbjct: 843 KKHRI 847
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,203,553
Number of Sequences: 237096
Number of extensions: 2297759
Number of successful extensions: 14252
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 14047
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14250
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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