Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_H06
(652 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011369-1|AAR96161.1| 261|Drosophila melanogaster RE57333p pro... 296 1e-80
AE014296-2240|AAF49846.1| 261|Drosophila melanogaster CG11276-P... 296 1e-80
AE014296-2239|AAF49847.1| 261|Drosophila melanogaster CG11276-P... 296 1e-80
D16257-1|BAA03786.1| 261|Drosophila melanogaster ribosomal prot... 291 7e-79
AF114160-1|AAD26161.2| 2077|Drosophila melanogaster adherin Nipp... 29 7.2
AE013599-26|EAA46003.3| 2077|Drosophila melanogaster CG17704-PF,... 29 7.2
AE013599-25|EAA46004.3| 2077|Drosophila melanogaster CG17704-PE,... 29 7.2
>BT011369-1|AAR96161.1| 261|Drosophila melanogaster RE57333p
protein.
Length = 261
Score = 296 bits (727), Expect = 1e-80
Identities = 135/178 (75%), Positives = 152/178 (85%)
Frame = +2
Query: 119 PTSCASACPWXIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEK 298
P + P IFLRNRLKYAL G EV KIV QRL+KVDGKVRTDPTYPAG+MDV+++EK
Sbjct: 35 PHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQRLVKVDGKVRTDPTYPAGYMDVITLEK 94
Query: 299 TNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLI 478
T E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+ G K VP+LVTHDGRTIRYPDPLI
Sbjct: 95 TGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLI 154
Query: 479 KVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIXD 652
NDS+Q+DIA+ KI D+IKF+SGNLCMITGGRNLGRVGT+V+RERHPGSFDIVHI D
Sbjct: 155 HANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGTVVNRERHPGSFDIVHIKD 212
Score = 93.9 bits (223), Expect = 2e-19
Identities = 42/47 (89%), Positives = 43/47 (91%)
Frame = +1
Query: 16 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLXDF 156
MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL F
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIF 47
>AE014296-2240|AAF49846.1| 261|Drosophila melanogaster CG11276-PB,
isoform B protein.
Length = 261
Score = 296 bits (727), Expect = 1e-80
Identities = 135/178 (75%), Positives = 152/178 (85%)
Frame = +2
Query: 119 PTSCASACPWXIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEK 298
P + P IFLRNRLKYAL G EV KIV QRL+KVDGKVRTDPTYPAG+MDV+++EK
Sbjct: 35 PHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQRLVKVDGKVRTDPTYPAGYMDVITLEK 94
Query: 299 TNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLI 478
T E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+ G K VP+LVTHDGRTIRYPDPLI
Sbjct: 95 TGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLI 154
Query: 479 KVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIXD 652
NDS+Q+DIA+ KI D+IKF+SGNLCMITGGRNLGRVGT+V+RERHPGSFDIVHI D
Sbjct: 155 HANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGTVVNRERHPGSFDIVHIKD 212
Score = 93.9 bits (223), Expect = 2e-19
Identities = 42/47 (89%), Positives = 43/47 (91%)
Frame = +1
Query: 16 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLXDF 156
MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL F
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIF 47
>AE014296-2239|AAF49847.1| 261|Drosophila melanogaster CG11276-PA,
isoform A protein.
Length = 261
Score = 296 bits (727), Expect = 1e-80
Identities = 135/178 (75%), Positives = 152/178 (85%)
Frame = +2
Query: 119 PTSCASACPWXIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEK 298
P + P IFLRNRLKYAL G EV KIV QRL+KVDGKVRTDPTYPAG+MDV+++EK
Sbjct: 35 PHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQRLVKVDGKVRTDPTYPAGYMDVITLEK 94
Query: 299 TNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLI 478
T E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+ G K VP+LVTHDGRTIRYPDPLI
Sbjct: 95 TGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLI 154
Query: 479 KVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIXD 652
NDS+Q+DIA+ KI D+IKF+SGNLCMITGGRNLGRVGT+V+RERHPGSFDIVHI D
Sbjct: 155 HANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGTVVNRERHPGSFDIVHIKD 212
Score = 93.9 bits (223), Expect = 2e-19
Identities = 42/47 (89%), Positives = 43/47 (91%)
Frame = +1
Query: 16 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLXDF 156
MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL F
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIF 47
>D16257-1|BAA03786.1| 261|Drosophila melanogaster ribosomal protein
S4 protein.
Length = 261
Score = 291 bits (713), Expect = 7e-79
Identities = 133/178 (74%), Positives = 150/178 (84%)
Frame = +2
Query: 119 PTSCASACPWXIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEK 298
P + P FLRNRLKYAL G EV KIV QRL+KV GKVRTDPTYPAG+MDV+++EK
Sbjct: 35 PHKLRESLPLLTFLRNRLKYALNGAEVTKIVMQRLVKVYGKVRTDPTYPAGYMDVITLEK 94
Query: 299 TNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLI 478
T E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+ G K VP+LVTHDGRTIRYPDPLI
Sbjct: 95 TGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLI 154
Query: 479 KVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIXD 652
NDS+Q+DIA+ KI D+IKF+SGNLCMITGGRNLGRVGT+V+RERHPGSFDIVHI D
Sbjct: 155 HANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGTVVNRERHPGSFDIVHIKD 212
Score = 94.7 bits (225), Expect = 1e-19
Identities = 42/47 (89%), Positives = 43/47 (91%)
Frame = +1
Query: 16 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLXDF 156
MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL F
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLTF 47
>AF114160-1|AAD26161.2| 2077|Drosophila melanogaster adherin Nipped-B
protein.
Length = 2077
Score = 28.7 bits (61), Expect = 7.2
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = -1
Query: 454 GAAIMRY-QVRNILRSGRH-TLDFTQLVLSLLRGDTVDCESALNIID*TKQFISL 296
G ++RY + I +S R +LD+ +V + LR DTV+ +NIID Q I L
Sbjct: 888 GTMLVRYVSDKGIEQSIRLVSLDYLGIVAARLRKDTVESRCRVNIIDSMIQSIKL 942
>AE013599-26|EAA46003.3| 2077|Drosophila melanogaster CG17704-PF,
isoform F protein.
Length = 2077
Score = 28.7 bits (61), Expect = 7.2
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = -1
Query: 454 GAAIMRY-QVRNILRSGRH-TLDFTQLVLSLLRGDTVDCESALNIID*TKQFISL 296
G ++RY + I +S R +LD+ +V + LR DTV+ +NIID Q I L
Sbjct: 888 GTMLVRYVSDKGIEQSIRLVSLDYLGIVAARLRKDTVESRCRVNIIDSMIQSIKL 942
>AE013599-25|EAA46004.3| 2077|Drosophila melanogaster CG17704-PE,
isoform E protein.
Length = 2077
Score = 28.7 bits (61), Expect = 7.2
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = -1
Query: 454 GAAIMRY-QVRNILRSGRH-TLDFTQLVLSLLRGDTVDCESALNIID*TKQFISL 296
G ++RY + I +S R +LD+ +V + LR DTV+ +NIID Q I L
Sbjct: 888 GTMLVRYVSDKGIEQSIRLVSLDYLGIVAARLRKDTVESRCRVNIIDSMIQSIKL 942
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,275,298
Number of Sequences: 53049
Number of extensions: 714581
Number of successful extensions: 1810
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1810
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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