Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_G23
         (460 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z47075-4|CAE17757.1|  129|Caenorhabditis elegans Hypothetical pr...    56   2e-08
Z73422-6|CAH04641.1|  316|Caenorhabditis elegans Hypothetical pr...    30   0.70 
Z80789-1|CAB02551.1|  708|Caenorhabditis elegans Hypothetical pr...    29   1.2  
AF100662-1|AAC68977.1|  900|Caenorhabditis elegans Hypothetical ...    28   2.8  

>Z47075-4|CAE17757.1|  129|Caenorhabditis elegans Hypothetical
           protein E02H1.8 protein.
          Length = 129

 Score = 55.6 bits (128), Expect = 2e-08
 Identities = 27/63 (42%), Positives = 35/63 (55%)
 Frame = +3

Query: 111 KAVNLKAAKKITIKFDPFGENATHTRNFAHYISAPKIAITNPNCSVKTEVLCDRSEPTVE 290
           +A+NL+  K I I  DP   +    R F H I APK+ +TNPN  VKT++  DR  P   
Sbjct: 25  RALNLQKVKSIDISLDPLHHDNLSIRTFWHSIMAPKVRLTNPNVRVKTDIRNDRRAPFFV 84

Query: 291 ITL 299
            TL
Sbjct: 85  ATL 87


>Z73422-6|CAH04641.1|  316|Caenorhabditis elegans Hypothetical
           protein B0564.11 protein.
          Length = 316

 Score = 30.3 bits (65), Expect = 0.70
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = +3

Query: 261 LCDRSEPTVEITLLPCNCS-NCKNTESDFKK*ESYLS*NSPIIE 389
           LC  +  T+ I L+PC C   C+N E  +++ + +L    P+IE
Sbjct: 240 LCSPNSSTMGIVLIPCGCHVMCQNLEDAYERNKHHL---EPLIE 280


>Z80789-1|CAB02551.1|  708|Caenorhabditis elegans Hypothetical
           protein F48C11.2 protein.
          Length = 708

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 16/53 (30%), Positives = 22/53 (41%)
 Frame = +3

Query: 162 FGENATHTRNFAHYISAPKIAITNPNCSVKTEVLCDRSEPTVEITLLPCNCSN 320
           F    T T   A YI      +   +CS+   VLCDR     +   +  NCS+
Sbjct: 113 FSNTPTSTTTCA-YIKTSSSGLVFDSCSIDANVLCDRPLQKQDYCSIIANCSS 164


>AF100662-1|AAC68977.1|  900|Caenorhabditis elegans Hypothetical
           protein H34C03.2 protein.
          Length = 900

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +3

Query: 66  IRRSKGVVSAIGKQLKAVNL-KAAKKITIKFDPFG 167
           +R    +V  +  QLK+  +    +KI+IKFDPFG
Sbjct: 415 MRNDSIIVDTLHGQLKSTLICPVCEKISIKFDPFG 449


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,782,557
Number of Sequences: 27780
Number of extensions: 194618
Number of successful extensions: 483
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 483
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 820565746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)