Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_G22
         (523 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1284 - 25864049-25864202,25864690-25864880,25865053-258658...    29   2.3  
02_03_0306 - 17540258-17540610,17544063-17544128,17544266-175443...    29   3.0  
08_02_0956 + 23026108-23027146,23027255-23027395,23029334-230295...    28   4.0  
12_01_0340 - 2605770-2605916,2606353-2606595,2607260-2607531,260...    28   5.2  
06_03_0721 - 23861426-23861929,23862013-23862219,23862598-238628...    27   6.9  
07_03_0405 - 17767303-17767665,17767815-17768039,17768115-177683...    27   9.1  
02_05_0460 - 29224525-29224620,29225525-29226625                       27   9.1  
01_07_0370 - 43119049-43120278,43121376-43121420,43121421-431216...    27   9.1  
01_06_1410 + 37116414-37116695,37116796-37116902,37117148-371176...    27   9.1  

>08_02_1284 -
           25864049-25864202,25864690-25864880,25865053-25865895,
           25865953-25866896,25867052-25867190,25867259-25867334,
           25867666-25867788,25867869-25867952,25868145-25868235,
           25868448-25868532,25868620-25868784,25868872-25868928,
           25870141-25870302
          Length = 1037

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 13/59 (22%), Positives = 32/59 (54%)
 Frame = +1

Query: 265 VKREEHNAEEENYKMYMDSLQKHQLESEYHTQISMEQLHQAMQSSLNNSGIVHNFQLPL 441
           + ++ H+ +++  ++    +Q+ Q   + H QI ++ +H +M +S+N     H  +L L
Sbjct: 549 IPQQLHHQQQQTQQL--QPVQQVQQSVQEHQQIKIQPVHVSMDASMNTQVADHQMKLQL 605


>02_03_0306 -
           17540258-17540610,17544063-17544128,17544266-17544397,
           17544530-17544685,17545216-17545375
          Length = 288

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = +1

Query: 286 AEEENYKMYMDSLQKHQL-ESEYHTQISMEQLHQAMQSSLNNSGIVHNFQL 435
           AEEE Y    D  Q HQ  E E H Q  +++ H  +    + +  +H+F L
Sbjct: 44  AEEEKYGKQPDEEQSHQAEEGEEHDQEQIQEYHVTIAHDFDLN--MHDFDL 92


>08_02_0956 +
           23026108-23027146,23027255-23027395,23029334-23029566,
           23029652-23030989
          Length = 916

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = -2

Query: 459 GHLPWGEWQLEVVDYTGVVQRGLHSLM-QLLHG 364
           G +P G+W    VD TG+V+R +   M +L++G
Sbjct: 148 GAVPRGDWSTWTVDVTGLVKRPMRLTMDELVNG 180


>12_01_0340 -
           2605770-2605916,2606353-2606595,2607260-2607531,
           2607691-2607733,2607822-2607899,2608026-2608085,
           2608272-2608331,2609440-2609577,2609655-2609767,
           2610333-2610569,2610867-2610918
          Length = 480

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +1

Query: 319 SLQKHQLESEYHTQISMEQLHQAMQSSLNNSGIVHN 426
           SLQ+   ++E      +EQLHQ++  ++ N G V N
Sbjct: 370 SLQQSSQQAEEALSQGLEQLHQSLAETVANGGSVVN 405


>06_03_0721 -
           23861426-23861929,23862013-23862219,23862598-23862852,
           23862858-23863212,23863533-23863834,23864006-23864281,
           23864854-23865167,23865411-23865683,23865831-23866415,
           23866806-23867132,23867270-23867337,23868670-23868746
          Length = 1180

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = +2

Query: 275 KNIMPKKRITKCTWTV--FRNISWKVNTTPK 361
           K+ + K   + CTW+   F+N+SWK+    K
Sbjct: 667 KSALSKVMTSLCTWSKRKFKNVSWKIEKIRK 697


>07_03_0405 -
           17767303-17767665,17767815-17768039,17768115-17768342,
           17768607-17768621,17768622-17768810,17769106-17769213,
           17769917-17770045
          Length = 418

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 21/99 (21%), Positives = 44/99 (44%)
 Frame = +1

Query: 223 LSSLNAEWFLKMDFVKREEHNAEEENYKMYMDSLQKHQLESEYHTQISMEQLHQAMQSSL 402
           +S L+  W +   F  RE+   E   +   +D  +  Q   +   + +M  +   ++  +
Sbjct: 143 VSQLSEAWTMPFAFCTREKRWCE---FAEPVDG-ESTQFLQQLAKKYNMVIVSPILERDV 198

Query: 403 NNSGIVHNFQLPLSPRQMSTLMLKTNHLSRSXNFNETTH 519
           N+  IV N  + +        + + NH+ R  +FNE+T+
Sbjct: 199 NHGEIVWNTAVVIGNHGNIIGIHRKNHIPRVGDFNESTY 237


>02_05_0460 - 29224525-29224620,29225525-29226625
          Length = 398

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
 Frame = +1

Query: 268 KREEHNAEEENYKMYMDSLQKHQLESEYH---TQISMEQLH-QAMQSSLNN-SGIVHN-- 426
           KR  H  EEE  +   D  ++ + E  +H   T  + +QLH Q + SS ++ S ++ +  
Sbjct: 4   KRSSHVEEEEEEEEEEDDEEEDEEEQGHHQYTTAAAQQQLHPQVLGSSASSPSSLMDSAA 63

Query: 427 FQLPLSPRQMS 459
           F  PL P  +S
Sbjct: 64  FSRPLLPPNLS 74


>01_07_0370 - 43119049-43120278,43121376-43121420,43121421-43121662,
            43121908-43122686,43123123-43123463,43123565-43123785,
            43123866-43124176,43124257-43124516,43124836-43124918,
            43124940-43125036,43125132-43125305,43126215-43126592
          Length = 1386

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = -1

Query: 358  GCGIHFPADVSEDCPCTFCNSLLRHYVLLFSQNPFLKTIQHLKSLNVFSF 209
            G GI F   +S+      CN+LL  Y  +  +N  L  +  LK   VFSF
Sbjct: 1037 GMGIGFAFGLSQFLLFA-CNALLLWYTAVAVKNGHLSLVTALKEYIVFSF 1085


>01_06_1410 +
           37116414-37116695,37116796-37116902,37117148-37117649,
           37118211-37118326,37119007-37119211
          Length = 403

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 10/28 (35%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = -3

Query: 434 NWKLWTIPELFREDCIA*CNC-SMEIWV 354
           +W+LW+IPE+  +DC+      S+ +W+
Sbjct: 333 HWRLWSIPEI--KDCLEEAGFKSIHVWI 358


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,575,528
Number of Sequences: 37544
Number of extensions: 230515
Number of successful extensions: 647
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 647
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)