Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_G22
(523 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB002333-1|BAA20793.2| 1484|Homo sapiens KIAA0335 protein. 34 0.26
BC069240-1|AAH69240.1| 494|Homo sapiens TMEM87A protein protein. 32 1.4
BC005335-1|AAH05335.1| 181|Homo sapiens TMEM87A protein protein. 32 1.4
AK075403-1|BAC11598.1| 564|Homo sapiens protein ( Homo sapiens ... 32 1.4
AK074870-1|BAC11256.1| 555|Homo sapiens protein ( Homo sapiens ... 32 1.4
BC038118-1|AAH38118.1| 647|Homo sapiens TMC5 protein protein. 30 5.7
BC027602-1|AAH27602.1| 760|Homo sapiens transmembrane channel-l... 30 5.7
AY358155-1|AAQ88522.1| 948|Homo sapiens SAYY8238 protein. 30 5.7
AY263164-1|AAP78779.1| 760|Homo sapiens TMC5 protein protein. 30 5.7
AY236494-1|AAP69872.1| 760|Homo sapiens transmembrane channel-l... 30 5.7
U57592-1|AAC50822.1| 1266|Homo sapiens jumonji putative protein ... 29 7.5
BC046246-1|AAH46246.1| 1246|Homo sapiens jumonji, AT rich intera... 29 9.9
AL136162-1|CAI15719.1| 1246|Homo sapiens jumonji, AT rich intera... 29 9.9
AL021938-1|CAI19873.1| 1246|Homo sapiens jumonji, AT rich intera... 29 9.9
>AB002333-1|BAA20793.2| 1484|Homo sapiens KIAA0335 protein.
Length = 1484
Score = 34.3 bits (75), Expect = 0.26
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +1
Query: 274 EEHNAEEENYKMYMDSLQKH-QLESEYHTQISMEQLHQAMQSSLNNSGIVHNFQLPLSPR 450
+EH +EE++ +++ ++ K + ESE T +S Q ++A + +SG + L P
Sbjct: 367 QEHLSEEKDERLHCENNDKAPESESEKPTPLSTGQGNRAEEGPNASSGFMKT--AVLGPT 424
Query: 451 QMSTLMLKTNHLSRSXNFNET 513
+ +M+K N L+ S N+N T
Sbjct: 425 -LKNVMMKNNKLAVSPNYNAT 444
>BC069240-1|AAH69240.1| 494|Homo sapiens TMEM87A protein protein.
Length = 494
Score = 31.9 bits (69), Expect = 1.4
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 229 SLNAEWFLKMDFVKREEHNAEEENYKMYMDSL-QKHQLESEYHTQISMEQ 375
SLN W+LK E +N + E ++Y++ L +K L +Y T + Q
Sbjct: 16 SLNITWYLKSADCYNEIYNFKAEEVELYLEKLKEKRGLSGKYQTSSKLFQ 65
>BC005335-1|AAH05335.1| 181|Homo sapiens TMEM87A protein protein.
Length = 181
Score = 31.9 bits (69), Expect = 1.4
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 229 SLNAEWFLKMDFVKREEHNAEEENYKMYMDSL-QKHQLESEYHTQISMEQ 375
SLN W+LK E +N + E ++Y++ L +K L +Y T + Q
Sbjct: 77 SLNITWYLKSADCYNEIYNFKAEEVELYLEKLKEKRGLSGKYQTSSKLFQ 126
>AK075403-1|BAC11598.1| 564|Homo sapiens protein ( Homo sapiens
cDNA PSEC0094 fis, clone NT2RP2001499, weakly similar to
PROTEIN PTM1 PRECURSOR. ).
Length = 564
Score = 31.9 bits (69), Expect = 1.4
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 229 SLNAEWFLKMDFVKREEHNAEEENYKMYMDSL-QKHQLESEYHTQISMEQ 375
SLN W+LK E +N + E ++Y++ L +K L +Y T + Q
Sbjct: 86 SLNITWYLKSADCYNEIYNFKAEEVELYLEKLKEKRGLSGKYQTSSKLFQ 135
>AK074870-1|BAC11256.1| 555|Homo sapiens protein ( Homo sapiens
cDNA FLJ90389 fis, clone NT2RP2005463, weakly similar to
PROTEIN PTM1 PRECURSOR. ).
Length = 555
Score = 31.9 bits (69), Expect = 1.4
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 229 SLNAEWFLKMDFVKREEHNAEEENYKMYMDSL-QKHQLESEYHTQISMEQ 375
SLN W+LK E +N + E ++Y++ L +K L +Y T + Q
Sbjct: 77 SLNITWYLKSADCYNEIYNFKAEEVELYLEKLKEKRGLSGKYQTSSKLFQ 126
>BC038118-1|AAH38118.1| 647|Homo sapiens TMC5 protein protein.
Length = 647
Score = 29.9 bits (64), Expect = 5.7
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = -2
Query: 408 VVQRGLHSLMQLLHGNLGVVFTFQLMFLKTVHVHFVILFFGIMF 277
V+ G ++ + HGN G + QL ++ T+ FF ++F
Sbjct: 143 VMYYGFYTNSTIQHGNSGASYNMQLAYIFTIGACLTTCFFSLLF 186
>BC027602-1|AAH27602.1| 760|Homo sapiens transmembrane channel-like
5 protein.
Length = 760
Score = 29.9 bits (64), Expect = 5.7
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = -2
Query: 408 VVQRGLHSLMQLLHGNLGVVFTFQLMFLKTVHVHFVILFFGIMF 277
V+ G ++ + HGN G + QL ++ T+ FF ++F
Sbjct: 256 VMYYGFYTNSTIQHGNSGASYNMQLAYIFTIGACLTTCFFSLLF 299
>AY358155-1|AAQ88522.1| 948|Homo sapiens SAYY8238 protein.
Length = 948
Score = 29.9 bits (64), Expect = 5.7
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = -2
Query: 408 VVQRGLHSLMQLLHGNLGVVFTFQLMFLKTVHVHFVILFFGIMF 277
V+ G ++ + HGN G + QL ++ T+ FF ++F
Sbjct: 502 VMYYGFYTNSTIQHGNSGASYNMQLAYIFTIGACLTTCFFSLLF 545
>AY263164-1|AAP78779.1| 760|Homo sapiens TMC5 protein protein.
Length = 760
Score = 29.9 bits (64), Expect = 5.7
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = -2
Query: 408 VVQRGLHSLMQLLHGNLGVVFTFQLMFLKTVHVHFVILFFGIMF 277
V+ G ++ + HGN G + QL ++ T+ FF ++F
Sbjct: 256 VMYYGFYTNSTIQHGNSGASYNMQLAYIFTIGACLTTCFFSLLF 299
>AY236494-1|AAP69872.1| 760|Homo sapiens transmembrane channel-like
protein 5 protein.
Length = 760
Score = 29.9 bits (64), Expect = 5.7
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = -2
Query: 408 VVQRGLHSLMQLLHGNLGVVFTFQLMFLKTVHVHFVILFFGIMF 277
V+ G ++ + HGN G + QL ++ T+ FF ++F
Sbjct: 256 VMYYGFYTNSTIQHGNSGASYNMQLAYIFTIGACLTTCFFSLLF 299
>U57592-1|AAC50822.1| 1266|Homo sapiens jumonji putative protein
protein.
Length = 1266
Score = 29.5 bits (63), Expect = 7.5
Identities = 18/80 (22%), Positives = 34/80 (42%)
Frame = +1
Query: 184 VRLVVVTEKN*RHLSSLNAEWFLKMDFVKREEHNAEEENYKMYMDSLQKHQLESEYHTQI 363
+R+ ++ L ++ L D + EEH E+ M + L+K + E HT+
Sbjct: 684 LRIPKTAQERLAKLQEAYCQYILSYDSLSPEEHRRLEKEVLMEKEILEKRKGPLEGHTEN 743
Query: 364 SMEQLHQAMQSSLNNSGIVH 423
+ H + N G++H
Sbjct: 744 DHHKFHPLPRLEPKN-GLIH 762
>BC046246-1|AAH46246.1| 1246|Homo sapiens jumonji, AT rich
interactive domain 2 protein.
Length = 1246
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/67 (25%), Positives = 29/67 (43%)
Frame = +1
Query: 223 LSSLNAEWFLKMDFVKREEHNAEEENYKMYMDSLQKHQLESEYHTQISMEQLHQAMQSSL 402
L ++ L D + EEH E+ M + L+K + E HT+ + H +
Sbjct: 697 LQEAYCQYLLSYDSLSPEEHRRLEKEVLMEKEILEKRKGPLEGHTENDHHKFHPLPRFEP 756
Query: 403 NNSGIVH 423
N G++H
Sbjct: 757 KN-GLIH 762
>AL136162-1|CAI15719.1| 1246|Homo sapiens jumonji, AT rich
interactive domain 2 protein.
Length = 1246
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/67 (25%), Positives = 29/67 (43%)
Frame = +1
Query: 223 LSSLNAEWFLKMDFVKREEHNAEEENYKMYMDSLQKHQLESEYHTQISMEQLHQAMQSSL 402
L ++ L D + EEH E+ M + L+K + E HT+ + H +
Sbjct: 697 LQEAYCQYLLSYDSLSPEEHRRLEKEVLMEKEILEKRKGPLEGHTENDHHKFHPLPRFEP 756
Query: 403 NNSGIVH 423
N G++H
Sbjct: 757 KN-GLIH 762
>AL021938-1|CAI19873.1| 1246|Homo sapiens jumonji, AT rich
interactive domain 2 protein.
Length = 1246
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/67 (25%), Positives = 29/67 (43%)
Frame = +1
Query: 223 LSSLNAEWFLKMDFVKREEHNAEEENYKMYMDSLQKHQLESEYHTQISMEQLHQAMQSSL 402
L ++ L D + EEH E+ M + L+K + E HT+ + H +
Sbjct: 697 LQEAYCQYLLSYDSLSPEEHRRLEKEVLMEKEILEKRKGPLEGHTENDHHKFHPLPRFEP 756
Query: 403 NNSGIVH 423
N G++H
Sbjct: 757 KN-GLIH 762
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,825,098
Number of Sequences: 237096
Number of extensions: 1393259
Number of successful extensions: 2791
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2791
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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