Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_G22
(523 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68227-15|CAJ80810.1| 414|Caenorhabditis elegans Hypothetical p... 30 0.87
Z68227-14|CAJ80809.1| 448|Caenorhabditis elegans Hypothetical p... 30 0.87
Z68227-13|CAA92511.1| 444|Caenorhabditis elegans Hypothetical p... 30 0.87
U39653-3|AAL56623.1| 1702|Caenorhabditis elegans Prion-like-(q/n... 29 1.5
AF039715-2|AAB96731.1| 158|Caenorhabditis elegans Hypothetical ... 29 1.5
Z99773-2|CAB16924.1| 291|Caenorhabditis elegans Hypothetical pr... 28 3.5
U97194-8|AAB52447.3| 1254|Caenorhabditis elegans Prion-like-(q/n... 28 3.5
Z81595-8|CAB54305.1| 345|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z81595-7|CAB54304.1| 358|Caenorhabditis elegans Hypothetical pr... 27 6.2
AF014939-9|AAB63931.2| 246|Caenorhabditis elegans Hypothetical ... 27 6.2
Z68752-9|CAA92985.1| 1208|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z68316-8|CAA92685.1| 1208|Caenorhabditis elegans Hypothetical pr... 27 8.1
U50191-7|AAK31555.2| 454|Caenorhabditis elegans Hypothetical pr... 27 8.1
>Z68227-15|CAJ80810.1| 414|Caenorhabditis elegans Hypothetical
protein F49C12.7c protein.
Length = 414
Score = 30.3 bits (65), Expect = 0.87
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 274 EEHNAEEENY-KMYMDSLQKHQLESEYHTQISMEQL 378
EE +A +E Y K Y D L KH E ++ +EQL
Sbjct: 316 EERHANKEKYLKHYFDCLTKHCKEDDHPVPFDLEQL 351
>Z68227-14|CAJ80809.1| 448|Caenorhabditis elegans Hypothetical
protein F49C12.7b protein.
Length = 448
Score = 30.3 bits (65), Expect = 0.87
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 274 EEHNAEEENY-KMYMDSLQKHQLESEYHTQISMEQL 378
EE +A +E Y K Y D L KH E ++ +EQL
Sbjct: 346 EERHANKEKYLKHYFDCLTKHCKEDDHPVPFDLEQL 381
>Z68227-13|CAA92511.1| 444|Caenorhabditis elegans Hypothetical
protein F49C12.7a protein.
Length = 444
Score = 30.3 bits (65), Expect = 0.87
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 274 EEHNAEEENY-KMYMDSLQKHQLESEYHTQISMEQL 378
EE +A +E Y K Y D L KH E ++ +EQL
Sbjct: 346 EERHANKEKYLKHYFDCLTKHCKEDDHPVPFDLEQL 381
>U39653-3|AAL56623.1| 1702|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 65,
isoform a protein.
Length = 1702
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +1
Query: 385 AMQSSLNNSGIVHNFQLPLSPRQMSTLMLKTNHLSRSXNFN 507
A + +N S H +Q+ SP +LK HL+R FN
Sbjct: 771 AFEQDMNASSSGHAYQMQNSPEVSIGKLLKQQHLNRPNQFN 811
>AF039715-2|AAB96731.1| 158|Caenorhabditis elegans Hypothetical
protein R06A10.3 protein.
Length = 158
Score = 29.5 bits (63), Expect = 1.5
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 313 MDSLQKH--QLESEYHTQISMEQLHQAMQSSLNNSGIVHNFQLPLSPR 450
M L +H QL++ YH E+ HQA++ + + H FQ SPR
Sbjct: 1 MKKLARHREQLKARYHIGSGQERGHQAVEKTAYRQRVQH-FQKSRSPR 47
>Z99773-2|CAB16924.1| 291|Caenorhabditis elegans Hypothetical
protein H06A10.1 protein.
Length = 291
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 202 TEKN*RHLSSLNAEWFLKMDFVKREEHNAE 291
T K RH SS N EW K+ + E+H +
Sbjct: 76 TPKIYRHFSSQNGEWLSKLVSLSHEQHQID 105
>U97194-8|AAB52447.3| 1254|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 20
protein.
Length = 1254
Score = 28.3 bits (60), Expect = 3.5
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +1
Query: 304 KMYMDSLQKHQLESEYHTQISMEQLHQAMQSSLNNSGIVHNFQLPLSPRQ 453
+M+M L +H + ++H ++ M +H Q L +H L P+Q
Sbjct: 1172 QMHMQMLPQHHQQQQHHEEMMM--MHHQQQQQLQQQQQMHQMPLHHLPQQ 1219
>Z81595-8|CAB54305.1| 345|Caenorhabditis elegans Hypothetical
protein T22H2.6b protein.
Length = 345
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2
Query: 318 VHVHFVILFFGIMFFSFH 265
V + F IL+F I +FSFH
Sbjct: 19 VRIFFCILYFNIKYFSFH 36
>Z81595-7|CAB54304.1| 358|Caenorhabditis elegans Hypothetical
protein T22H2.6a protein.
Length = 358
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2
Query: 318 VHVHFVILFFGIMFFSFH 265
V + F IL+F I +FSFH
Sbjct: 19 VRIFFCILYFNIKYFSFH 36
>AF014939-9|AAB63931.2| 246|Caenorhabditis elegans Hypothetical
protein ZC132.9 protein.
Length = 246
Score = 27.5 bits (58), Expect = 6.2
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3
Query: 455 ICLGESGNWKLWTIPEL 405
+ + SGNW+ W +PEL
Sbjct: 3 VVVAMSGNWQFWNLPEL 19
>Z68752-9|CAA92985.1| 1208|Caenorhabditis elegans Hypothetical
protein K08E4.1 protein.
Length = 1208
Score = 27.1 bits (57), Expect = 8.1
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -2
Query: 423 VDYTGVVQRGLHSLMQLLH-GNLGVVFTFQLMFLKTVHVHFVI 298
VD G Q H L+QL H GN+GV+ + L+ +++H V+
Sbjct: 529 VDSLGQFQ--YHDLVQLDHTGNVGVIVRLEKEHLEVLNMHGVV 569
>Z68316-8|CAA92685.1| 1208|Caenorhabditis elegans Hypothetical
protein K08E4.1 protein.
Length = 1208
Score = 27.1 bits (57), Expect = 8.1
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -2
Query: 423 VDYTGVVQRGLHSLMQLLH-GNLGVVFTFQLMFLKTVHVHFVI 298
VD G Q H L+QL H GN+GV+ + L+ +++H V+
Sbjct: 529 VDSLGQFQ--YHDLVQLDHTGNVGVIVRLEKEHLEVLNMHGVV 569
>U50191-7|AAK31555.2| 454|Caenorhabditis elegans Hypothetical
protein T14B4.9 protein.
Length = 454
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +1
Query: 238 AEWFLKMDFVKREEHNAEEENYKMYMDSL-QKHQLESEY 351
AE F+ +E+H EEE Y ++ + KH LE Y
Sbjct: 398 AELIYNRTFLGQEDHPLEEEYYANMVNVIYHKHHLEPNY 436
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,532,438
Number of Sequences: 27780
Number of extensions: 227234
Number of successful extensions: 679
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 679
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -