Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_G18
         (630 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0217 + 1848970-1849251,1849419-1849566,1849638-1849789,185...    42   4e-04
02_05_1316 - 35679456-35679538,35679660-35679722,35679824-356799...    32   0.43 
02_05_1317 - 35683659-35683756,35683904-35683966,35684068-356841...    31   0.75 
12_01_1041 - 10711362-10711428,10711571-10712262,10712622-107127...    28   5.3  
07_03_1397 + 26269186-26269525,26269727-26269932,26270225-262703...    28   7.0  

>01_01_0217 +
           1848970-1849251,1849419-1849566,1849638-1849789,
           1850146-1850328,1850690-1850765,1850956-1851033,
           1851584-1851669,1852680-1852753,1852920-1852965,
           1853211-1853320,1853600-1853774,1854501-1854749
          Length = 552

 Score = 41.9 bits (94), Expect = 4e-04
 Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
 Frame = +3

Query: 399 GQEIKVEGATVKVHHTPGHTTDHIVLTCLEENILFSGDCILGEGTAVFE-----DLYTYM 563
           G+ I +    ++V   PGHT  H+ +  +  N L  GD  +G+G+A  +     ++  Y 
Sbjct: 319 GENICIGDQQLQVVFAPGHTDGHMGVLHVNTNALIVGDHCVGQGSATLDNRAGGNMKDYF 378

Query: 564 KSLQNILDLKPNXIYP 611
           ++  N LD+ P+ + P
Sbjct: 379 QTTYNFLDMSPHVLIP 394


>02_05_1316 -
           35679456-35679538,35679660-35679722,35679824-35679938,
           35680271-35680372,35680667-35680736,35681182-35681273,
           35681542-35681622,35681697-35681740,35681829-35681976
          Length = 265

 Score = 31.9 bits (69), Expect = 0.43
 Identities = 21/67 (31%), Positives = 31/67 (46%)
 Frame = +3

Query: 381 IEWLRDGQEIKVEGATVKVHHTPGHTTDHIVLTCLEENILFSGDCILGEGTAVFEDLYTY 560
           +EW   G      GA  ++ HTPGHT   + L       LF+GD +     +   DL+  
Sbjct: 153 VEWKLTGNGPWDIGADFELIHTPGHTEGSVCLFYKPVKALFTGDHVAKSEESDDLDLF-L 211

Query: 561 MKSLQNI 581
           M S Q++
Sbjct: 212 MYSKQSV 218


>02_05_1317 -
           35683659-35683756,35683904-35683966,35684068-35684182,
           35684385-35684486,35684687-35684756,35684878-35684952,
           35685188-35685279,35685386-35685493,35685560-35685640,
           35685728-35685771,35685858-35685984
          Length = 324

 Score = 31.1 bits (67), Expect = 0.75
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = +3

Query: 420 GATVKVHHTPGHTTDHIVLTCLEENILFSGDCILGEGTAVFEDLYTYM 563
           GA  ++ HTPGHT   + L       LF+GD +     +  +DLY ++
Sbjct: 220 GADFELIHTPGHTQGSVCLFYKPVKALFTGDHVAKSEES--DDLYLFL 265


>12_01_1041 -
           10711362-10711428,10711571-10712262,10712622-10712777,
           10712885-10713957,10714422-10714524,10714694-10714876,
           10715007-10715099,10715379-10715564,10716530-10716793
          Length = 938

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +3

Query: 423 ATVKVHHTPGHTTDHIVLTCLEENILFSGDCILGEGTA 536
           +T  V H   HT D +   C +  +L SG CI+  G A
Sbjct: 564 STGDVSHK-SHTEDQVNAVCQKNVVLSSGTCIISNGFA 600


>07_03_1397 +
           26269186-26269525,26269727-26269932,26270225-26270327,
           26270570-26270577
          Length = 218

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +3

Query: 525 EGTAVFEDLYTYMKSLQNILDLKPNXIYPWSWE 623
           + + V E   T +K +  IL  K   + PW WE
Sbjct: 160 DSSNVAEAFQTVVKEIYGILSRKSPGVMPWDWE 192


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,529,364
Number of Sequences: 37544
Number of extensions: 338077
Number of successful extensions: 683
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 683
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1537558360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)