Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_G15
(441 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein. 219 5e-57
BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16 p... 219 5e-57
BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16 p... 219 5e-57
AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16 p... 219 5e-57
BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein. 136 2e-32
AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens ... 106 4e-23
BC057240-1|AAH57240.1| 396|Homo sapiens mitochondrial ribosomal... 47 3e-05
BC047784-1|AAH47784.1| 302|Homo sapiens MRPS9 protein protein. 47 3e-05
BC093771-1|AAH93771.1| 1127|Homo sapiens NCK-associated protein ... 31 1.8
BC093769-1|AAH93769.1| 1127|Homo sapiens NCK-associated protein ... 31 1.8
Y08982-1|CAA70171.1| 1530|Homo sapiens synaptonemal complex late... 29 9.4
BC146798-1|AAI46799.1| 792|Homo sapiens Unknown (protein for IM... 29 9.4
BC132870-1|AAI32871.1| 1530|Homo sapiens synaptonemal complex pr... 29 9.4
BC132864-1|AAI32865.1| 1530|Homo sapiens synaptonemal complex pr... 29 9.4
BC040566-1|AAH40566.1| 1024|Homo sapiens SYCP2 protein protein. 29 9.4
AL365410-1|CAB96954.1| 198|Homo sapiens hypothetical protein pr... 29 9.4
AL158092-3|CAM28338.1| 1023|Homo sapiens synaptonemal complex pr... 29 9.4
AL158092-2|CAC36022.2| 1530|Homo sapiens synaptonemal complex pr... 29 9.4
AL109928-10|CAM28269.1| 1023|Homo sapiens synaptonemal complex p... 29 9.4
AL109928-9|CAI21795.1| 1530|Homo sapiens synaptonemal complex pr... 29 9.4
AL080226-1|CAB45780.1| 520|Homo sapiens hypothetical protein pr... 29 9.4
>M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein.
Length = 146
Score = 219 bits (534), Expect = 5e-57
Identities = 99/129 (76%), Positives = 120/129 (93%)
Frame = +2
Query: 53 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 232
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 233 VDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDXASKKEIQDILVXYDRSLLVADPR 412
VDIRV VKGGGHVAQ+YAIRQ+ISKAL+A+YQKYVD ASKKEI+DIL+ YDR+LLVADPR
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPR 125
Query: 413 RWQPXKFGG 439
R + KFGG
Sbjct: 126 RCESKKFGG 134
>BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 219 bits (534), Expect = 5e-57
Identities = 99/129 (76%), Positives = 120/129 (93%)
Frame = +2
Query: 53 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 232
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 233 VDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDXASKKEIQDILVXYDRSLLVADPR 412
VDIRV VKGGGHVAQ+YAIRQ+ISKAL+A+YQKYVD ASKKEI+DIL+ YDR+LLVADPR
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPR 125
Query: 413 RWQPXKFGG 439
R + KFGG
Sbjct: 126 RCESKKFGG 134
>BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 219 bits (534), Expect = 5e-57
Identities = 99/129 (76%), Positives = 120/129 (93%)
Frame = +2
Query: 53 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 232
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 233 VDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDXASKKEIQDILVXYDRSLLVADPR 412
VDIRV VKGGGHVAQ+YAIRQ+ISKAL+A+YQKYVD ASKKEI+DIL+ YDR+LLVADPR
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPR 125
Query: 413 RWQPXKFGG 439
R + KFGG
Sbjct: 126 RCESKKFGG 134
>AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 219 bits (534), Expect = 5e-57
Identities = 99/129 (76%), Positives = 120/129 (93%)
Frame = +2
Query: 53 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 232
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 233 VDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDXASKKEIQDILVXYDRSLLVADPR 412
VDIRV VKGGGHVAQ+YAIRQ+ISKAL+A+YQKYVD ASKKEI+DIL+ YDR+LLVADPR
Sbjct: 66 VDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPR 125
Query: 413 RWQPXKFGG 439
R + KFGG
Sbjct: 126 RCESKKFGG 134
>BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein.
Length = 152
Score = 136 bits (330), Expect = 2e-32
Identities = 60/83 (72%), Positives = 75/83 (90%)
Frame = +2
Query: 53 PIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSM 232
P+Q+VQVFGRKKTATAVA+CKRG+G+++VNGRPL+++EPR LQYKL EP+LLLGKE+F+
Sbjct: 6 PLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAG 65
Query: 233 VDIRVTVKGGGHVAQVYAIRQAI 301
VDIRV VKGGGHVAQ+Y Q +
Sbjct: 66 VDIRVRVKGGGHVAQIYGESQEL 88
Score = 29.9 bits (64), Expect = 4.1
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +3
Query: 318 PSTRNM*TKPXRRKSKTS*YXTIGVCW 398
P TRNM + RR+SKTS G CW
Sbjct: 126 PITRNMWMRLPRRRSKTSSSSMTGPCW 152
>AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens
cDNA FLJ40618 fis, clone THYMU2013089, moderately
similar to 40S RIBOSOMAL PROTEIN S16. ).
Length = 178
Score = 106 bits (254), Expect = 4e-23
Identities = 55/106 (51%), Positives = 73/106 (68%)
Frame = +2
Query: 56 IQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMV 235
+Q+VQ+F K+ A AV C+ G G +R+N PL+++ LQYKL E LLL KE+ + +
Sbjct: 18 LQSVQIFTYKEMAIAVVLCRCGSGFIRMNEGPLEMIRLLTLQYKLLELGLLLDKEQLAGM 77
Query: 236 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDXASKKEIQDIL 373
DI V VKG GHV Q+YA+ Q ISKAL+ Y KYVD AS +EI+D L
Sbjct: 78 DIHVRVKGSGHVVQIYAVLQYISKALVPCYPKYVDEAS-EEIKDTL 122
>BC057240-1|AAH57240.1| 396|Homo sapiens mitochondrial ribosomal
protein S9 protein.
Length = 396
Score = 47.2 bits (107), Expect = 3e-05
Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +2
Query: 77 GRKKTATAVAYC-KRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 253
G++KTA A A K G G ++VNG L P + Q + Q ++ D+ TV
Sbjct: 274 GKRKTAKAEAIVYKHGSGRIKVNGIDYQLYFP-ITQDREQLMFPFHFVDRLGKHDVTCTV 332
Query: 254 KGGGHVAQVYAIRQAISKALIAF 322
GGG AQ AIR A++KAL +F
Sbjct: 333 SGGGRSAQAGAIRLAMAKALCSF 355
>BC047784-1|AAH47784.1| 302|Homo sapiens MRPS9 protein protein.
Length = 302
Score = 47.2 bits (107), Expect = 3e-05
Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +2
Query: 77 GRKKTATAVAYC-KRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTV 253
G++KTA A A K G G ++VNG L P + Q + Q ++ D+ TV
Sbjct: 180 GKRKTAKAEAIVYKHGSGRIKVNGIDYQLYFP-ITQDREQLMFPFHFVDRLGKHDVTCTV 238
Query: 254 KGGGHVAQVYAIRQAISKALIAF 322
GGG AQ AIR A++KAL +F
Sbjct: 239 SGGGRSAQAGAIRLAMAKALCSF 261
>BC093771-1|AAH93771.1| 1127|Homo sapiens NCK-associated protein
1-like protein.
Length = 1127
Score = 31.1 bits (67), Expect = 1.8
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +2
Query: 164 EPRLLQYKLQEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVD 340
+P L K EP L +KF +D+R + + H+ V+ + I + L +YQ +VD
Sbjct: 42 KPPFLLEKSMEPSLKYINKKFPNIDVRNSTQ---HLGPVHREKAEIIRFLTNYYQSFVD 97
>BC093769-1|AAH93769.1| 1127|Homo sapiens NCK-associated protein
1-like protein.
Length = 1127
Score = 31.1 bits (67), Expect = 1.8
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +2
Query: 164 EPRLLQYKLQEPILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVD 340
+P L K EP L +KF +D+R + + H+ V+ + I + L +YQ +VD
Sbjct: 42 KPPFLLEKSMEPSLKYINKKFPNIDVRNSTQ---HLGPVHREKAEIIRFLTNYYQSFVD 97
>Y08982-1|CAA70171.1| 1530|Homo sapiens synaptonemal complex lateral
element protein protein.
Length = 1530
Score = 28.7 bits (61), Expect = 9.4
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 275 QVYAIRQAISKALIAFYQKYVDXASKKEIQDILVXYDRSLLVAD 406
Q+Y+I SK L+ K SK+E +++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>BC146798-1|AAI46799.1| 792|Homo sapiens Unknown (protein for
IMAGE:8860302) protein.
Length = 792
Score = 28.7 bits (61), Expect = 9.4
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 275 QVYAIRQAISKALIAFYQKYVDXASKKEIQDILVXYDRSLLVAD 406
Q+Y+I SK L+ K SK+E +++L+ +D SL + +
Sbjct: 338 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 381
>BC132870-1|AAI32871.1| 1530|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1530
Score = 28.7 bits (61), Expect = 9.4
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 275 QVYAIRQAISKALIAFYQKYVDXASKKEIQDILVXYDRSLLVAD 406
Q+Y+I SK L+ K SK+E +++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>BC132864-1|AAI32865.1| 1530|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1530
Score = 28.7 bits (61), Expect = 9.4
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 275 QVYAIRQAISKALIAFYQKYVDXASKKEIQDILVXYDRSLLVAD 406
Q+Y+I SK L+ K SK+E +++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>BC040566-1|AAH40566.1| 1024|Homo sapiens SYCP2 protein protein.
Length = 1024
Score = 28.7 bits (61), Expect = 9.4
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 275 QVYAIRQAISKALIAFYQKYVDXASKKEIQDILVXYDRSLLVAD 406
Q+Y+I SK L+ K SK+E +++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL365410-1|CAB96954.1| 198|Homo sapiens hypothetical protein
protein.
Length = 198
Score = 28.7 bits (61), Expect = 9.4
Identities = 11/19 (57%), Positives = 16/19 (84%), Gaps = 1/19 (5%)
Frame = +3
Query: 180 STNF-RNLSFCSARKNSLW 233
S+NF +N+SFC R++SLW
Sbjct: 49 SSNFEKNMSFCQIRRDSLW 67
>AL158092-3|CAM28338.1| 1023|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1023
Score = 28.7 bits (61), Expect = 9.4
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 275 QVYAIRQAISKALIAFYQKYVDXASKKEIQDILVXYDRSLLVAD 406
Q+Y+I SK L+ K SK+E +++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL158092-2|CAC36022.2| 1530|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1530
Score = 28.7 bits (61), Expect = 9.4
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 275 QVYAIRQAISKALIAFYQKYVDXASKKEIQDILVXYDRSLLVAD 406
Q+Y+I SK L+ K SK+E +++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL109928-10|CAM28269.1| 1023|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1023
Score = 28.7 bits (61), Expect = 9.4
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 275 QVYAIRQAISKALIAFYQKYVDXASKKEIQDILVXYDRSLLVAD 406
Q+Y+I SK L+ K SK+E +++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL109928-9|CAI21795.1| 1530|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1530
Score = 28.7 bits (61), Expect = 9.4
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 275 QVYAIRQAISKALIAFYQKYVDXASKKEIQDILVXYDRSLLVAD 406
Q+Y+I SK L+ K SK+E +++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL080226-1|CAB45780.1| 520|Homo sapiens hypothetical protein
protein.
Length = 520
Score = 28.7 bits (61), Expect = 9.4
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 275 QVYAIRQAISKALIAFYQKYVDXASKKEIQDILVXYDRSLLVAD 406
Q+Y+I SK L+ K SK+E +++L+ +D SL + +
Sbjct: 61 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 104
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,902,928
Number of Sequences: 237096
Number of extensions: 1537717
Number of successful extensions: 3785
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3783
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3602345922
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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