Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_G14
(507 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 178 1e-44
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 178 1e-44
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 178 1e-44
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 178 1e-44
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 178 1e-44
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 178 1e-44
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 176 4e-44
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 151 1e-36
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 116 6e-26
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 178 bits (433), Expect = 1e-44
Identities = 81/126 (64%), Positives = 92/126 (73%)
Frame = +1
Query: 127 RRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSH 306
RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+H
Sbjct: 22 RRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAH 81
Query: 307 ELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGA 486
ELP+YGVKVGLTNYAAAY TG EYNVE +D PGA
Sbjct: 82 ELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGA 141
Query: 487 SXCYLD 504
CYLD
Sbjct: 142 FTCYLD 147
Score = 44.0 bits (99), Expect = 3e-04
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +3
Query: 63 MGFVKVVKNKQYFKRYQVKF 122
MGFVKVVKNK YFKRYQVKF
Sbjct: 1 MGFVKVVKNKAYFKRYQVKF 20
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 178 bits (433), Expect = 1e-44
Identities = 81/126 (64%), Positives = 92/126 (73%)
Frame = +1
Query: 127 RRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSH 306
RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+H
Sbjct: 22 RRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAH 81
Query: 307 ELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGA 486
ELP+YGVKVGLTNYAAAY TG EYNVE +D PGA
Sbjct: 82 ELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGA 141
Query: 487 SXCYLD 504
CYLD
Sbjct: 142 FTCYLD 147
Score = 44.0 bits (99), Expect = 3e-04
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +3
Query: 63 MGFVKVVKNKQYFKRYQVKF 122
MGFVKVVKNK YFKRYQVKF
Sbjct: 1 MGFVKVVKNKAYFKRYQVKF 20
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 178 bits (433), Expect = 1e-44
Identities = 81/126 (64%), Positives = 92/126 (73%)
Frame = +1
Query: 127 RRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSH 306
RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+H
Sbjct: 22 RRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAH 81
Query: 307 ELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGA 486
ELP+YGVKVGLTNYAAAY TG EYNVE +D PGA
Sbjct: 82 ELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGA 141
Query: 487 SXCYLD 504
CYLD
Sbjct: 142 FTCYLD 147
Score = 44.0 bits (99), Expect = 3e-04
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +3
Query: 63 MGFVKVVKNKQYFKRYQVKF 122
MGFVKVVKNK YFKRYQVKF
Sbjct: 1 MGFVKVVKNKAYFKRYQVKF 20
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 178 bits (433), Expect = 1e-44
Identities = 81/126 (64%), Positives = 92/126 (73%)
Frame = +1
Query: 127 RRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSH 306
RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+H
Sbjct: 22 RRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAH 81
Query: 307 ELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGA 486
ELP+YGVKVGLTNYAAAY TG EYNVE +D PGA
Sbjct: 82 ELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGA 141
Query: 487 SXCYLD 504
CYLD
Sbjct: 142 FTCYLD 147
Score = 44.0 bits (99), Expect = 3e-04
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +3
Query: 63 MGFVKVVKNKQYFKRYQVKF 122
MGFVKVVKNK YFKRYQVKF
Sbjct: 1 MGFVKVVKNKAYFKRYQVKF 20
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 178 bits (433), Expect = 1e-44
Identities = 81/126 (64%), Positives = 92/126 (73%)
Frame = +1
Query: 127 RRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSH 306
RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+H
Sbjct: 22 RRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAH 81
Query: 307 ELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGA 486
ELP+YGVKVGLTNYAAAY TG EYNVE +D PGA
Sbjct: 82 ELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGA 141
Query: 487 SXCYLD 504
CYLD
Sbjct: 142 FTCYLD 147
Score = 44.0 bits (99), Expect = 3e-04
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +3
Query: 63 MGFVKVVKNKQYFKRYQVKF 122
MGFVKVVKNK YFKRYQVKF
Sbjct: 1 MGFVKVVKNKAYFKRYQVKF 20
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 178 bits (433), Expect = 1e-44
Identities = 81/126 (64%), Positives = 92/126 (73%)
Frame = +1
Query: 127 RRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSH 306
RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+H
Sbjct: 29 RRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAH 88
Query: 307 ELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGA 486
ELP+YGVKVGLTNYAAAY TG EYNVE +D PGA
Sbjct: 89 ELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGA 148
Query: 487 SXCYLD 504
CYLD
Sbjct: 149 FTCYLD 154
Score = 44.0 bits (99), Expect = 3e-04
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +3
Query: 63 MGFVKVVKNKQYFKRYQVKF 122
MGFVKVVKNK YFKRYQVKF
Sbjct: 8 MGFVKVVKNKAYFKRYQVKF 27
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 176 bits (428), Expect = 4e-44
Identities = 80/126 (63%), Positives = 91/126 (72%)
Frame = +1
Query: 127 RRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSH 306
RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCA Y+H
Sbjct: 22 RRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCARYAH 81
Query: 307 ELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGA 486
ELP+YGVKVGLTNYAAAY TG EYNVE +D PGA
Sbjct: 82 ELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGA 141
Query: 487 SXCYLD 504
CYLD
Sbjct: 142 FTCYLD 147
Score = 44.0 bits (99), Expect = 3e-04
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +3
Query: 63 MGFVKVVKNKQYFKRYQVKF 122
MGFVKVVKNK YFKRYQVKF
Sbjct: 1 MGFVKVVKNKAYFKRYQVKF 20
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 151 bits (366), Expect = 1e-36
Identities = 65/77 (84%), Positives = 75/77 (97%)
Frame = +1
Query: 127 RRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSH 306
RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+H
Sbjct: 22 RRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAH 81
Query: 307 ELPRYGVKVGLTNYAAA 357
ELP+YGVKVGLTNYAAA
Sbjct: 82 ELPKYGVKVGLTNYAAA 98
Score = 44.0 bits (99), Expect = 3e-04
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +3
Query: 63 MGFVKVVKNKQYFKRYQVKF 122
MGFVKVVKNK YFKRYQVKF
Sbjct: 1 MGFVKVVKNKAYFKRYQVKF 20
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 116 bits (278), Expect = 6e-26
Identities = 53/97 (54%), Positives = 63/97 (64%)
Frame = +1
Query: 214 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXX 393
+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLL 60
Query: 394 XXXXXXXXXXXXXXXXXXEYNVEPVDNGPGASXCYLD 504
EYNVE +D PGA CYLD
Sbjct: 61 NRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLD 97
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,153,162
Number of Sequences: 237096
Number of extensions: 1474001
Number of successful extensions: 2603
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2595
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4706589866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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