Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_G14
         (507 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49967-5|CAA90251.1|  293|Caenorhabditis elegans Hypothetical pr...   152   2e-37
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr...    30   1.1  
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p...    30   1.1  
Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical pr...    28   3.4  
Z93390-6|CAB07675.4|  816|Caenorhabditis elegans Hypothetical pr...    28   4.5  
Z93390-1|CAE46674.1|  540|Caenorhabditis elegans Hypothetical pr...    28   4.5  
Z80214-7|CAC42261.2|  816|Caenorhabditis elegans Hypothetical pr...    28   4.5  
AL021482-3|CAA16340.3| 1499|Caenorhabditis elegans Hypothetical ...    27   5.9  
AF177199-1|AAK81894.1| 1455|Caenorhabditis elegans mutant dosage...    27   5.9  
Z66524-6|CAA91418.2|  408|Caenorhabditis elegans Hypothetical pr...    27   7.8  
AF022969-1|AAB69894.3|  391|Caenorhabditis elegans Hypothetical ...    27   7.8  

>Z49967-5|CAA90251.1|  293|Caenorhabditis elegans Hypothetical
           protein F54C9.5 protein.
          Length = 293

 Score =  152 bits (368), Expect = 2e-37
 Identities = 68/81 (83%), Positives = 76/81 (93%)
 Frame = +1

Query: 127 RRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSH 306
           RRREGKTDYYARKRL VQDKNKYNTPKYRLIVR++NKDV  Q+AYS+IEGD +V +AYSH
Sbjct: 22  RRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDVVAQLAYSKIEGDVVVASAYSH 81

Query: 307 ELPRYGVKVGLTNYAAAYSTG 369
           ELPRYG+KVGLTNYAAAY+TG
Sbjct: 82  ELPRYGLKVGLTNYAAAYATG 102



 Score = 38.7 bits (86), Expect = 0.002
 Identities = 16/19 (84%), Positives = 17/19 (89%)
 Frame = +3

Query: 63  MGFVKVVKNKQYFKRYQVK 119
           MG VKV+KNK YFKRYQVK
Sbjct: 1   MGLVKVIKNKAYFKRYQVK 19


>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
            F25H8.3 protein.
          Length = 2165

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -3

Query: 298  KQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYI-CS 185
            +QR     ++ + + P   HLC R+++  DI  CYI CS
Sbjct: 980  RQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018


>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
            protein F25H8.3 protein.
          Length = 2165

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -3

Query: 298  KQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYI-CS 185
            +QR     ++ + + P   HLC R+++  DI  CYI CS
Sbjct: 980  RQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018


>Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical
           protein K10G4.5 protein.
          Length = 1251

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = +1

Query: 193 YNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI---VCAAYSHEL 312
           YN P+YR +++L  K   C+     + GD++   +CA +  EL
Sbjct: 548 YNDPEYRNVMKLKIKSPICE--QCEVTGDNLPFGICAEHETEL 588


>Z93390-6|CAB07675.4|  816|Caenorhabditis elegans Hypothetical
           protein T23B5.3a protein.
          Length = 816

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -3

Query: 340 SDQPSHHNVATHVNKQRTQYGHLQSESRP 254
           SD P HH   +H + Q  Q  HLQ    P
Sbjct: 17  SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45


>Z93390-1|CAE46674.1|  540|Caenorhabditis elegans Hypothetical
           protein T23B5.3b protein.
          Length = 540

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -3

Query: 340 SDQPSHHNVATHVNKQRTQYGHLQSESRP 254
           SD P HH   +H + Q  Q  HLQ    P
Sbjct: 17  SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45


>Z80214-7|CAC42261.2|  816|Caenorhabditis elegans Hypothetical
           protein T23B5.3a protein.
          Length = 816

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -3

Query: 340 SDQPSHHNVATHVNKQRTQYGHLQSESRP 254
           SD P HH   +H + Q  Q  HLQ    P
Sbjct: 17  SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45


>AL021482-3|CAA16340.3| 1499|Caenorhabditis elegans Hypothetical
            protein Y39A1B.3 protein.
          Length = 1499

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 18/76 (23%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
 Frame = +2

Query: 17   LVSRLWTPLCNLDLKYGIR*-SCEEQTILQEVPSKIQRGVVKGKLIIMLVNASLFRTRTN 193
            ++++LW  +  LD+ +GI     +   IL  + S+ +RG+ + +  + +V   L      
Sbjct: 833  VINKLW--MIALDMSHGINSRKIDALRILYPI-SRSERGIAEARSRLRVVQKKLMDPELA 889

Query: 194  ITHLNIV*LCVSPTKM 241
            +  L I+ +  +PTK+
Sbjct: 890  VDALRIISILGTPTKL 905


>AF177199-1|AAK81894.1| 1455|Caenorhabditis elegans mutant dosage
            compensation protein protein.
          Length = 1455

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 18/76 (23%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
 Frame = +2

Query: 17   LVSRLWTPLCNLDLKYGIR*-SCEEQTILQEVPSKIQRGVVKGKLIIMLVNASLFRTRTN 193
            ++++LW  +  LD+ +GI     +   IL  + S+ +RG+ + +  + +V   L      
Sbjct: 789  VINKLW--MIALDMSHGINSRKIDALRILYPI-SRSERGIAEARSRLRVVQKKLMDPELA 845

Query: 194  ITHLNIV*LCVSPTKM 241
            +  L I+ +  +PTK+
Sbjct: 846  VDALRIISILGTPTKL 861


>Z66524-6|CAA91418.2|  408|Caenorhabditis elegans Hypothetical
           protein T13H5.2 protein.
          Length = 408

 Score = 27.1 bits (57), Expect = 7.8
 Identities = 14/69 (20%), Positives = 31/69 (44%)
 Frame = -3

Query: 340 SDQPSHHNVATHVNKQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYICSCPEQRGVY 161
           +D P+      +V+ + T +  +  E   PG     W   +++DI    + +   +  V 
Sbjct: 291 NDLPAEKLTKLNVSARSTTFVPITLEGNVPGRKLYWWWRLENNDINFSILRAAEGEEKVA 350

Query: 160 EHNNQFSLH 134
           EH++ + +H
Sbjct: 351 EHDDDYMVH 359


>AF022969-1|AAB69894.3|  391|Caenorhabditis elegans Hypothetical
           protein C29G2.5 protein.
          Length = 391

 Score = 27.1 bits (57), Expect = 7.8
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +1

Query: 184 KNKYNTPKYRLIVRLSNKDVTCQVAYSRIEG 276
           K+K  TP YRL++ L + D+T  V  S I G
Sbjct: 187 KSKSRTPTYRLMLILGSLDLTGLVISSLIPG 217


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,690,208
Number of Sequences: 27780
Number of extensions: 235223
Number of successful extensions: 598
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 598
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)