Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_G11
(611 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83231-1|CAB05749.1| 357|Caenorhabditis elegans Hypothetical pr... 31 0.86
Z69664-11|CAA93518.2| 1479|Caenorhabditis elegans Hypothetical p... 29 2.0
AL022716-7|CAA18775.2| 1479|Caenorhabditis elegans Hypothetical ... 29 2.0
AL021570-1|CAA16510.2| 1479|Caenorhabditis elegans Hypothetical ... 29 2.0
AC006776-7|AAF60623.1| 361|Caenorhabditis elegans Serpentine re... 29 2.0
Z79601-5|CAB01882.1| 450|Caenorhabditis elegans Hypothetical pr... 28 6.0
AF067613-9|AAN73863.2| 326|Caenorhabditis elegans Serpentine re... 28 6.0
Z83239-8|CAH60787.1| 311|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z81030-13|CAB02705.2| 358|Caenorhabditis elegans Hypothetical p... 27 8.0
AC024831-2|AAN63422.1| 502|Caenorhabditis elegans Hypothetical ... 27 8.0
AC024831-1|AAN63421.1| 500|Caenorhabditis elegans Hypothetical ... 27 8.0
>Z83231-1|CAB05749.1| 357|Caenorhabditis elegans Hypothetical
protein F57G9.1 protein.
Length = 357
Score = 30.7 bits (66), Expect = 0.86
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +3
Query: 369 YIIYLPFNLKLMVIYVSILGLILGFMVRNMGIYSLNKLLLRYNLRSFL 512
Y P NLKL++ +L IL + N+ IY ++K+ L + FL
Sbjct: 17 YFYNEPLNLKLVISIFELLSYILCGYILNLSIYVMSKIQLFHKNLMFL 64
>Z69664-11|CAA93518.2| 1479|Caenorhabditis elegans Hypothetical
protein C24F3.5 protein.
Length = 1479
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +3
Query: 363 YPYIIYLPFNLKLMVIYVSILGLILGFMVRNMGIYSLN 476
+P +Y F ++ ++ +ILGF V +MG ++ N
Sbjct: 940 WPRYVYFGFIYVFQLVVFLVIAIILGFAVLSMGFFATN 977
>AL022716-7|CAA18775.2| 1479|Caenorhabditis elegans Hypothetical
protein C24F3.5 protein.
Length = 1479
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +3
Query: 363 YPYIIYLPFNLKLMVIYVSILGLILGFMVRNMGIYSLN 476
+P +Y F ++ ++ +ILGF V +MG ++ N
Sbjct: 940 WPRYVYFGFIYVFQLVVFLVIAIILGFAVLSMGFFATN 977
>AL021570-1|CAA16510.2| 1479|Caenorhabditis elegans Hypothetical
protein C24F3.5 protein.
Length = 1479
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +3
Query: 363 YPYIIYLPFNLKLMVIYVSILGLILGFMVRNMGIYSLN 476
+P +Y F ++ ++ +ILGF V +MG ++ N
Sbjct: 940 WPRYVYFGFIYVFQLVVFLVIAIILGFAVLSMGFFATN 977
>AC006776-7|AAF60623.1| 361|Caenorhabditis elegans Serpentine
receptor, class w protein100 protein.
Length = 361
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3
Query: 156 LIVFILFYLSTGLTVFYTFRLII 224
L+ ILF+LS L+VFY FR ++
Sbjct: 147 LMAVILFFLSALLSVFYQFRFVV 169
>Z79601-5|CAB01882.1| 450|Caenorhabditis elegans Hypothetical
protein K09A9.3 protein.
Length = 450
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +3
Query: 126 LEMVSFNSFNLIVFILFYLSTGLTVFYTFRLIIYVIINDFN 248
L +V+ ++FI ST LT F+T +I +++N N
Sbjct: 126 LSIVAVCVITTMIFIYVETSTWLTGFFTLTIITIIVLNGAN 166
>AF067613-9|AAN73863.2| 326|Caenorhabditis elegans Serpentine
receptor, class z protein20 protein.
Length = 326
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/58 (24%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Frame = +3
Query: 90 PFLSGFYSKDLILEMVSFNSFNLIVFIL--FYLSTGLTVFYTFRLIIYVIINDFNLII 257
PF++ FYS +++++ +I+FI+ + L + V T ++I+V+++ ++I
Sbjct: 62 PFVNHFYSVIRMVQIIFLCMCTVIIFIILAYTLRSTSLVILTLAVMIFVVLSGIFVLI 119
>Z83239-8|CAH60787.1| 311|Caenorhabditis elegans Hypothetical
protein T09F5.16 protein.
Length = 311
Score = 27.5 bits (58), Expect = 8.0
Identities = 32/150 (21%), Positives = 61/150 (40%)
Frame = +3
Query: 90 PFLSGFYSKDLILEMVSFNSFNLIVFILFYLSTGLTVFYTFRLIIYVIINDFNLIIIYNL 269
P + FY +++V+ F LF G T F+ F + + +I+ F L+ +
Sbjct: 46 PVFNHFYKSIKKIQIVNAIYILYFFFTLFMAFFGAT-FFVFLIPVLLIV--FPLVTGL-M 101
Query: 270 YDEDYIMLNRIFVXXXXXXXXXXXXXXXXXXYPYIIYLPFNLKLMVIYVSILGLILGFMV 449
+D + +L + + + + NL + I S++ +IL ++
Sbjct: 102 HDVNEFLLGLLSIQRFCLYFMPNYEKYLNISVEALNVVVRNLYICFIIKSVMLIILPYIY 161
Query: 450 RNMGIYSLNKLLLRYNLRSFLCLI*FIPNL 539
+ +LL NL FLC + +IP L
Sbjct: 162 TANILTYTTLILLFQNLFVFLCALLYIPIL 191
>Z81030-13|CAB02705.2| 358|Caenorhabditis elegans Hypothetical
protein C01G10.3 protein.
Length = 358
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 156 LIVFILFYLSTGLTVFYTFRLIIYVIINDFNL-IIIYNLYDEDYIMLNRIF 305
L+V I Y+ L F + + II F + +++YN + Y+ +NR F
Sbjct: 71 LVVMIGVYVPESLIGFSIYPRSVESIIIIFGMNLLVYNEFQSVYLSINRFF 121
>AC024831-2|AAN63422.1| 502|Caenorhabditis elegans Hypothetical
protein Y55F3C.7b protein.
Length = 502
Score = 27.5 bits (58), Expect = 8.0
Identities = 10/36 (27%), Positives = 22/36 (61%)
Frame = +3
Query: 129 EMVSFNSFNLIVFILFYLSTGLTVFYTFRLIIYVII 236
E VS N FNL+ ++ +L+ V +T +++ +++
Sbjct: 327 ECVSVNEFNLLYYLCIFLAVCSIVGFTMNIVLALML 362
>AC024831-1|AAN63421.1| 500|Caenorhabditis elegans Hypothetical
protein Y55F3C.7a protein.
Length = 500
Score = 27.5 bits (58), Expect = 8.0
Identities = 10/36 (27%), Positives = 22/36 (61%)
Frame = +3
Query: 129 EMVSFNSFNLIVFILFYLSTGLTVFYTFRLIIYVII 236
E VS N FNL+ ++ +L+ V +T +++ +++
Sbjct: 327 ECVSVNEFNLLYYLCIFLAVCSIVGFTMNIVLALML 362
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,407,550
Number of Sequences: 27780
Number of extensions: 101515
Number of successful extensions: 333
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 333
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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