Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_G08
(571 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0740 + 6243517-6243526,6244822-6245323,6245415-6245496,624... 230 5e-61
03_02_0897 - 12239375-12239458,12240035-12240116,12240213-122407... 215 2e-56
05_01_0490 + 4083768-4083775,4083845-4084336,4084441-4084522,408... 208 2e-54
01_05_0379 + 21630223-21631188 31 0.49
10_08_0141 + 15159160-15159306,15159708-15159815,15159958-151600... 29 2.0
08_02_1331 + 26195949-26196132,26196606-26196710,26197270-261981... 28 4.6
05_04_0070 + 17643945-17644002,17644173-17644775,17645376-176455... 28 4.6
04_01_0289 + 3830052-3831134,3831141-3831230,3831494-3831525,383... 28 4.6
12_02_0957 + 24807261-24807311,24807436-24807773,24808727-248089... 27 8.0
10_08_1022 + 22337332-22339398 27 8.0
02_05_0844 - 32144417-32144764,32145588-32145686,32146218-321464... 27 8.0
>11_01_0740 +
6243517-6243526,6244822-6245323,6245415-6245496,
6245741-6245821
Length = 224
Score = 230 bits (563), Expect = 5e-61
Identities = 100/127 (78%), Positives = 112/127 (88%)
Frame = +1
Query: 40 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRANVDDFPLCVHLVSDEYEQL 219
MGRRPARCYR KNKPYPKSR+CRGVPDPKIRI+D+G K+ VD+FP CVHLVS E E +
Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENV 60
Query: 220 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 399
SSEALEA RI CNKY+ KN GKD FH+R+R+HPFHV+RINKMLSCAGADRLQTGMRGAFG
Sbjct: 61 SSEALEAARIACNKYMTKNAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
Query: 400 KPQGYCS 420
KPQG C+
Sbjct: 121 KPQGTCA 127
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/51 (47%), Positives = 30/51 (58%)
Frame = +2
Query: 413 TVARVRXGQPIMSVRSSDRWKAXVIEALRXAKFKFPGTSKDLRIKEVGFXK 565
T ARV GQ ++SVR + EALR AKFKFPG K + ++ GF K
Sbjct: 125 TCARVDIGQVLLSVRCKESNAKHAEEALRRAKFKFPGRQKIIHSRKWGFTK 175
Score = 28.7 bits (61), Expect = 3.4
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3
Query: 519 PERQKIYVSKKWGFXKY 569
P RQKI S+KWGF K+
Sbjct: 160 PGRQKIIHSRKWGFTKF 176
>03_02_0897 -
12239375-12239458,12240035-12240116,12240213-12240714,
12241150-12241303,12241458-12241629,12242237-12242443,
12242926-12243323
Length = 532
Score = 215 bits (525), Expect = 2e-56
Identities = 93/123 (75%), Positives = 106/123 (86%)
Frame = +1
Query: 52 PARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRANVDDFPLCVHLVSDEYEQLSSEA 231
P RCYR KNKPYPKSR+CRGVPDPKIRIFD+G+K+ + DDFPLCVHLVS E E +SSEA
Sbjct: 312 PVRCYRQIKNKPYPKSRYCRGVPDPKIRIFDVGQKKRSADDFPLCVHLVSWEKENVSSEA 371
Query: 232 LEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQG 411
LEA RI CNKY+ K+ GKD FH+R+ HP+HV+RINKMLSCAGADRLQTGMRGAFGKP G
Sbjct: 372 LEAARIACNKYMAKHAGKDAFHLRVCAHPYHVLRINKMLSCAGADRLQTGMRGAFGKPTG 431
Query: 412 YCS 420
C+
Sbjct: 432 TCA 434
Score = 46.8 bits (106), Expect = 1e-05
Identities = 25/51 (49%), Positives = 31/51 (60%)
Frame = +2
Query: 413 TVARVRXGQPIMSVRSSDRWKAXVIEALRXAKFKFPGTSKDLRIKEVGFXK 565
T ARVR GQ ++SVR D A EALR AKFKFPG + + + GF +
Sbjct: 432 TCARVRIGQVLLSVRCRDANAAHAQEALRRAKFKFPGRQRVIFSAKWGFTR 482
>05_01_0490 +
4083768-4083775,4083845-4084336,4084441-4084522,
4086671-4087357,4087555-4087813,4088435-4088558,
4089474-4089564
Length = 580
Score = 208 bits (508), Expect = 2e-54
Identities = 90/120 (75%), Positives = 104/120 (86%)
Frame = +1
Query: 61 CYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRANVDDFPLCVHLVSDEYEQLSSEALEA 240
CYR KNKPYPKSR+CRGVPDPKIRI+D+G K+ VD+F CVHLVS E E ++SEALEA
Sbjct: 4 CYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFSHCVHLVSWEKENVTSEALEA 63
Query: 241 GRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGYCS 420
RI CNKY+ K+ GKD FH+R+R+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQG C+
Sbjct: 64 ARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCA 123
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/51 (47%), Positives = 29/51 (56%)
Frame = +2
Query: 413 TVARVRXGQPIMSVRSSDRWKAXVIEALRXAKFKFPGTSKDLRIKEVGFXK 565
T ARV GQ ++SVR EALR AKFKFPG K + ++ GF K
Sbjct: 121 TCARVDIGQVLLSVRCKPNNAVHASEALRRAKFKFPGRQKIIESRKWGFTK 171
Score = 29.1 bits (62), Expect = 2.6
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3
Query: 519 PERQKIYVSKKWGFXKY 569
P RQKI S+KWGF K+
Sbjct: 156 PGRQKIIESRKWGFTKF 172
>01_05_0379 + 21630223-21631188
Length = 321
Score = 31.5 bits (68), Expect = 0.49
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +3
Query: 369 APDWDAWCVWQASGLL*HVXAXDNPSCPCALVTGGRH 479
AP ++ WC W ASG+ H NP A+ GG H
Sbjct: 83 APPYN-WCPWDASGVRGHPRDPRNPIRCIAICVGGSH 118
>10_08_0141 +
15159160-15159306,15159708-15159815,15159958-15160006,
15160067-15160182,15160358-15160399,15161026-15161442,
15162356-15162509,15162911-15162975,15163793-15163870,
15163951-15164061,15164227-15164271,15164677-15164850,
15165383-15166335,15166471-15166681,15167037-15167196,
15168786-15169174
Length = 1072
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +1
Query: 178 PLC-VHLVSDEYEQLSSEALEAGRICCNKYLVKNCG 282
P C +HL SD Y S E ++AG+ C L K G
Sbjct: 592 PRCDIHLKSDGYTNYSLETVQAGKQQCKAALQKELG 627
>08_02_1331 +
26195949-26196132,26196606-26196710,26197270-26198127,
26198669-26199458,26200240-26200329,26200636-26200712,
26200797-26201383
Length = 896
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +1
Query: 487 RGSAPCQVQVPRNVKRSTYQRSGVSQS 567
+GS PC+ +VP+ +K++ Y R G+ S
Sbjct: 727 KGSFPCKAKVPKELKKACY-RQGIWSS 752
>05_04_0070 +
17643945-17644002,17644173-17644775,17645376-17645579,
17646480-17647009
Length = 464
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +1
Query: 256 NKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGY 414
+KY++ + H + H+IR N+ L+ +G + L T + + G Q Y
Sbjct: 117 DKYVITGFEQGHTHAFVSPDKRHLIRSNRKLTLSGRNTLLTCHKASIGTSQAY 169
>04_01_0289 +
3830052-3831134,3831141-3831230,3831494-3831525,
3833690-3834623
Length = 712
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 163 NVDDFPLCVHLVSDEYEQLSSEALEAGR-ICC 255
NV++ P + L+ DE +++ E L AGR I C
Sbjct: 679 NVEEIPTSMDLMKDENDKIQLEILTAGRNIAC 710
>12_02_0957 +
24807261-24807311,24807436-24807773,24808727-24808927,
24809024-24809069,24809284-24809600,24809949-24810072,
24810465-24810537,24810968-24811173,24811384-24811651,
24811780-24811877,24812116-24812379
Length = 661
Score = 27.5 bits (58), Expect = 8.0
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -3
Query: 269 TRYLLQQIRPASKASELSCSYSSDTKCTHSGKSS 168
+R+ ++ P+ ELSC ++T C H G S
Sbjct: 85 SRFKVRIFNPSGCEKELSCVMMNNTPCGHEGSMS 118
>10_08_1022 + 22337332-22339398
Length = 688
Score = 27.5 bits (58), Expect = 8.0
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -2
Query: 147 QIEDTDLGIRYTPTEPRFRIRFIFAVPVASRWPAPHGDLYKVTPT 13
++ TD+ + + PR R F + AS WP PH D P+
Sbjct: 216 ELGSTDVIFQTGDSIPRIRALFNLSAAAASSWP-PHPDAASADPS 259
>02_05_0844 -
32144417-32144764,32145588-32145686,32146218-32146410,
32147049-32147107,32147189-32147263,32147557-32147670,
32147776-32147895,32148204-32148216,32148421-32148512,
32149078-32149164,32149254-32149328,32149630-32149680,
32149852-32149947,32150135-32150221,32150312-32150368,
32150475-32150600,32150709-32150949,32151028-32151114,
32151260-32151637,32152847-32153187
Length = 912
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -1
Query: 181 VESRQRSLSSYPNRRYGSWDQVHPDRTSISDTVYFCSTG 65
+ S + + S GSW H D +++ DT+ CS+G
Sbjct: 758 MNSSNQQIGSPSEEDLGSWGH-HSDPSTVPDTILQCSSG 795
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,982,365
Number of Sequences: 37544
Number of extensions: 377523
Number of successful extensions: 1065
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1065
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1317005676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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