Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_G08
(571 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48334-1|CAA88308.1| 214|Caenorhabditis elegans Hypothetical pr... 238 2e-63
Z81035-9|CAB02734.1| 628|Caenorhabditis elegans Hypothetical pr... 29 3.1
AL021488-11|CAN86609.1| 1245|Caenorhabditis elegans Hypothetical... 29 3.1
AL021488-10|CAA16368.2| 1247|Caenorhabditis elegans Hypothetical... 29 3.1
AL021488-9|CAC42378.2| 1245|Caenorhabditis elegans Hypothetical ... 29 3.1
AL021483-11|CAN86637.1| 1245|Caenorhabditis elegans Hypothetical... 29 3.1
AL021483-10|CAA16349.2| 1247|Caenorhabditis elegans Hypothetical... 29 3.1
AL021483-9|CAC42374.2| 1245|Caenorhabditis elegans Hypothetical ... 29 3.1
AF099919-10|AAC68792.1| 205|Caenorhabditis elegans Max-like pro... 29 3.1
Z46791-1|CAA86761.1| 476|Caenorhabditis elegans Hypothetical pr... 28 4.1
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 27 7.2
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 27 7.2
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 27 7.2
Z81146-10|CAB54274.2| 796|Caenorhabditis elegans Hypothetical p... 27 9.5
Z81146-9|CAB03528.1| 817|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z81121-3|CAJ80825.1| 501|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z81121-2|CAB54308.2| 796|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z81121-1|CAB03351.1| 817|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 27 9.5
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z70308-15|CAJ80814.1| 501|Caenorhabditis elegans Hypothetical p... 27 9.5
Z70308-14|CAB54254.2| 796|Caenorhabditis elegans Hypothetical p... 27 9.5
Z70308-13|CAA94353.1| 817|Caenorhabditis elegans Hypothetical p... 27 9.5
Z70308-8|CAJ76942.1| 475|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z70308-7|CAA94352.1| 508|Caenorhabditis elegans Hypothetical pr... 27 9.5
AY090019-1|AAM09088.1| 796|Caenorhabditis elegans minibrain kin... 27 9.5
AF039053-3|AAC25880.2| 349|Caenorhabditis elegans Hypothetical ... 27 9.5
AF016450-13|AAB65988.2| 472|Caenorhabditis elegans Hypothetical... 27 9.5
>Z48334-1|CAA88308.1| 214|Caenorhabditis elegans Hypothetical
protein F10B5.1 protein.
Length = 214
Score = 238 bits (582), Expect = 2e-63
Identities = 105/124 (84%), Positives = 112/124 (90%)
Frame = +1
Query: 40 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRANVDDFPLCVHLVSDEYEQL 219
MGRRPARCYRY KNKPYPKSRFCRGVPD KIRIFDLG KRANVD FP CVH++S+E E L
Sbjct: 1 MGRRPARCYRYIKNKPYPKSRFCRGVPDAKIRIFDLGNKRANVDTFPACVHMMSNEREHL 60
Query: 220 SSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 399
SSEALEA RIC NKY+VKNCGKD FH+R+R HPFHV RINKMLSCAGADRLQTGMRGA+G
Sbjct: 61 SSEALEAARICANKYMVKNCGKDGFHLRVRKHPFHVTRINKMLSCAGADRLQTGMRGAYG 120
Query: 400 KPQG 411
KPQG
Sbjct: 121 KPQG 124
Score = 37.1 bits (82), Expect = 0.009
Identities = 21/50 (42%), Positives = 27/50 (54%)
Frame = +2
Query: 416 VARVRXGQPIMSVRSSDRWKAXVIEALRXAKFKFPGTSKDLRIKEVGFXK 565
VARV G + S+R + IEA R AKFKFPG + ++ GF K
Sbjct: 126 VARVDIGDILFSMRIKEGNVKHAIEAFRRAKFKFPGRQIIVSSRKWGFTK 175
>Z81035-9|CAB02734.1| 628|Caenorhabditis elegans Hypothetical
protein C15H11.3 protein.
Length = 628
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +1
Query: 1 CFRGCWCH-FVKITMGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFD 144
CF CW + K M R+ +R K K+RF R PD + R D
Sbjct: 6 CFGNCWLRRWEKSDMNRKGFGGHRDAKQLSRTKNRFARLDPDTQSRYED 54
>AL021488-11|CAN86609.1| 1245|Caenorhabditis elegans Hypothetical
protein Y45F10A.6c protein.
Length = 1245
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -2
Query: 468 LSLERTDMMGCPMRTRATVTLRLAKRTTHPSLEPISSSAR*HFIDADNVERVKSHADME 292
L++E TD++G P RT+A + R + P E + A V HA+ME
Sbjct: 962 LAIEATDLLGTPKRTQAQLQERRSNSVDIPRKESDQNLADSLRTRCSTSSAVMIHANME 1020
>AL021488-10|CAA16368.2| 1247|Caenorhabditis elegans Hypothetical
protein Y45F10A.6a protein.
Length = 1247
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -2
Query: 468 LSLERTDMMGCPMRTRATVTLRLAKRTTHPSLEPISSSAR*HFIDADNVERVKSHADME 292
L++E TD++G P RT+A + R + P E + A V HA+ME
Sbjct: 962 LAIEATDLLGTPKRTQAQLQERRSNSVDIPRKESDQNLADSLRTRCSTSSAVMIHANME 1020
>AL021488-9|CAC42378.2| 1245|Caenorhabditis elegans Hypothetical
protein Y45F10A.6b protein.
Length = 1245
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -2
Query: 468 LSLERTDMMGCPMRTRATVTLRLAKRTTHPSLEPISSSAR*HFIDADNVERVKSHADME 292
L++E TD++G P RT+A + R + P E + A V HA+ME
Sbjct: 962 LAIEATDLLGTPKRTQAQLQERRSNSVDIPRKESDQNLADSLRTRCSTSSAVMIHANME 1020
>AL021483-11|CAN86637.1| 1245|Caenorhabditis elegans Hypothetical
protein Y45F10A.6c protein.
Length = 1245
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -2
Query: 468 LSLERTDMMGCPMRTRATVTLRLAKRTTHPSLEPISSSAR*HFIDADNVERVKSHADME 292
L++E TD++G P RT+A + R + P E + A V HA+ME
Sbjct: 962 LAIEATDLLGTPKRTQAQLQERRSNSVDIPRKESDQNLADSLRTRCSTSSAVMIHANME 1020
>AL021483-10|CAA16349.2| 1247|Caenorhabditis elegans Hypothetical
protein Y45F10A.6a protein.
Length = 1247
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -2
Query: 468 LSLERTDMMGCPMRTRATVTLRLAKRTTHPSLEPISSSAR*HFIDADNVERVKSHADME 292
L++E TD++G P RT+A + R + P E + A V HA+ME
Sbjct: 962 LAIEATDLLGTPKRTQAQLQERRSNSVDIPRKESDQNLADSLRTRCSTSSAVMIHANME 1020
>AL021483-9|CAC42374.2| 1245|Caenorhabditis elegans Hypothetical
protein Y45F10A.6b protein.
Length = 1245
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -2
Query: 468 LSLERTDMMGCPMRTRATVTLRLAKRTTHPSLEPISSSAR*HFIDADNVERVKSHADME 292
L++E TD++G P RT+A + R + P E + A V HA+ME
Sbjct: 962 LAIEATDLLGTPKRTQAQLQERRSNSVDIPRKESDQNLADSLRTRCSTSSAVMIHANME 1020
>AF099919-10|AAC68792.1| 205|Caenorhabditis elegans Max-like
protein 2 protein.
Length = 205
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 100 RFCRGVPDPKIRIFDLGKKRANVDDFPLCVHLVSDEYEQLSSEALEAGR 246
R C + K I D K+ A ++ + +++ EYEQ++S +AG+
Sbjct: 93 RACDFMSQLKTDISDADKQLAQLNAQAAALEMIASEYEQMASSVPDAGQ 141
>Z46791-1|CAA86761.1| 476|Caenorhabditis elegans Hypothetical
protein C09G5.2 protein.
Length = 476
Score = 28.3 bits (60), Expect = 4.1
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 404 GLPNAPRIPVWSLSAPA 354
G PN+P +P+W LS P+
Sbjct: 232 GFPNSPLLPIWLLSYPS 248
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = -2
Query: 162 RSLLTQIED--TDLGIRYTPTEPRFRIRFIFAVPVA 61
RS + IE +D+ + TP +P+ +F+F VPVA
Sbjct: 593 RSYMKLIETAISDILLHRTPIDPQADYKFVFEVPVA 628
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = -2
Query: 162 RSLLTQIED--TDLGIRYTPTEPRFRIRFIFAVPVA 61
RS + IE +D+ + TP +P+ +F+F VPVA
Sbjct: 593 RSYMKLIETAISDILLHRTPIDPQADYKFVFEVPVA 628
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = -2
Query: 162 RSLLTQIED--TDLGIRYTPTEPRFRIRFIFAVPVA 61
RS + IE +D+ + TP +P+ +F+F VPVA
Sbjct: 176 RSYMKLIETAISDILLHRTPIDPQADYKFVFEVPVA 211
>Z81146-10|CAB54274.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +2
Query: 347 YRALELI-GSRLGCVVRLASLRVTVARVRXGQPIMSVRSSDRWKAXVIEALRXAKFKFPG 523
YRA E+I G++ G + + SL +A + G P++ + A +IE L K
Sbjct: 627 YRAPEVILGTKYGMPIDMWSLGCILAELLTGYPLLPGEDENDQLALIIELLGMPPPKSLE 686
Query: 524 TSKDLR 541
T+K R
Sbjct: 687 TAKRAR 692
>Z81146-9|CAB03528.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +2
Query: 347 YRALELI-GSRLGCVVRLASLRVTVARVRXGQPIMSVRSSDRWKAXVIEALRXAKFKFPG 523
YRA E+I G++ G + + SL +A + G P++ + A +IE L K
Sbjct: 627 YRAPEVILGTKYGMPIDMWSLGCILAELLTGYPLLPGEDENDQLALIIELLGMPPPKSLE 686
Query: 524 TSKDLR 541
T+K R
Sbjct: 687 TAKRAR 692
>Z81121-3|CAJ80825.1| 501|Caenorhabditis elegans Hypothetical
protein F49E11.1e protein.
Length = 501
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +2
Query: 347 YRALELI-GSRLGCVVRLASLRVTVARVRXGQPIMSVRSSDRWKAXVIEALRXAKFKFPG 523
YRA E+I G++ G + + SL +A + G P++ + A +IE L K
Sbjct: 326 YRAPEVILGTKYGMPIDMWSLGCILAELLTGYPLLPGEDENDQLALIIELLGMPPPKSLE 385
Query: 524 TSKDLR 541
T+K R
Sbjct: 386 TAKRAR 391
>Z81121-2|CAB54308.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +2
Query: 347 YRALELI-GSRLGCVVRLASLRVTVARVRXGQPIMSVRSSDRWKAXVIEALRXAKFKFPG 523
YRA E+I G++ G + + SL +A + G P++ + A +IE L K
Sbjct: 627 YRAPEVILGTKYGMPIDMWSLGCILAELLTGYPLLPGEDENDQLALIIELLGMPPPKSLE 686
Query: 524 TSKDLR 541
T+K R
Sbjct: 687 TAKRAR 692
>Z81121-1|CAB03351.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +2
Query: 347 YRALELI-GSRLGCVVRLASLRVTVARVRXGQPIMSVRSSDRWKAXVIEALRXAKFKFPG 523
YRA E+I G++ G + + SL +A + G P++ + A +IE L K
Sbjct: 627 YRAPEVILGTKYGMPIDMWSLGCILAELLTGYPLLPGEDENDQLALIIELLGMPPPKSLE 686
Query: 524 TSKDLR 541
T+K R
Sbjct: 687 TAKRAR 692
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 27.1 bits (57), Expect = 9.5
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = -1
Query: 325 RGKGEVSCGYGTD-PFRSSLRGTYCSRYVLPPKPLSSAVHIRRTPSARTVESRQRSLSSY 149
RG V+ + ++ +S++ TY + PK LSSA R++ S +S QRS S+
Sbjct: 1879 RGNLSVASSFSSEGTSKSAVDSTYAPSSI--PKSLSSASIARQSASPIPQQSSQRSAKSH 1936
Query: 148 PNRR 137
+++
Sbjct: 1937 HHQK 1940
>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical
protein R11A8.7d protein.
Length = 1427
Score = 27.1 bits (57), Expect = 9.5
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = -1
Query: 325 RGKGEVSCGYGTD-PFRSSLRGTYCSRYVLPPKPLSSAVHIRRTPSARTVESRQRSLSSY 149
RG V+ + ++ +S++ TY + PK LSSA R++ S +S QRS S+
Sbjct: 700 RGNLSVASSFSSEGTSKSAVDSTYAPSSI--PKSLSSASIARQSASPIPQQSSQRSAKSH 757
Query: 148 PNRR 137
+++
Sbjct: 758 HHQK 761
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 27.1 bits (57), Expect = 9.5
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = -1
Query: 325 RGKGEVSCGYGTD-PFRSSLRGTYCSRYVLPPKPLSSAVHIRRTPSARTVESRQRSLSSY 149
RG V+ + ++ +S++ TY + PK LSSA R++ S +S QRS S+
Sbjct: 1879 RGNLSVASSFSSEGTSKSAVDSTYAPSSI--PKSLSSASIARQSASPIPQQSSQRSAKSH 1936
Query: 148 PNRR 137
+++
Sbjct: 1937 HHQK 1940
>Z70308-15|CAJ80814.1| 501|Caenorhabditis elegans Hypothetical
protein F49E11.1e protein.
Length = 501
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +2
Query: 347 YRALELI-GSRLGCVVRLASLRVTVARVRXGQPIMSVRSSDRWKAXVIEALRXAKFKFPG 523
YRA E+I G++ G + + SL +A + G P++ + A +IE L K
Sbjct: 326 YRAPEVILGTKYGMPIDMWSLGCILAELLTGYPLLPGEDENDQLALIIELLGMPPPKSLE 385
Query: 524 TSKDLR 541
T+K R
Sbjct: 386 TAKRAR 391
>Z70308-14|CAB54254.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +2
Query: 347 YRALELI-GSRLGCVVRLASLRVTVARVRXGQPIMSVRSSDRWKAXVIEALRXAKFKFPG 523
YRA E+I G++ G + + SL +A + G P++ + A +IE L K
Sbjct: 627 YRAPEVILGTKYGMPIDMWSLGCILAELLTGYPLLPGEDENDQLALIIELLGMPPPKSLE 686
Query: 524 TSKDLR 541
T+K R
Sbjct: 687 TAKRAR 692
>Z70308-13|CAA94353.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +2
Query: 347 YRALELI-GSRLGCVVRLASLRVTVARVRXGQPIMSVRSSDRWKAXVIEALRXAKFKFPG 523
YRA E+I G++ G + + SL +A + G P++ + A +IE L K
Sbjct: 627 YRAPEVILGTKYGMPIDMWSLGCILAELLTGYPLLPGEDENDQLALIIELLGMPPPKSLE 686
Query: 524 TSKDLR 541
T+K R
Sbjct: 687 TAKRAR 692
>Z70308-8|CAJ76942.1| 475|Caenorhabditis elegans Hypothetical
protein F49E11.1d protein.
Length = 475
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +2
Query: 347 YRALELI-GSRLGCVVRLASLRVTVARVRXGQPIMSVRSSDRWKAXVIEALRXAKFKFPG 523
YRA E+I G++ G + + SL +A + G P++ + A +IE L K
Sbjct: 300 YRAPEVILGTKYGMPIDMWSLGCILAELLTGYPLLPGEDENDQLALIIELLGMPPPKSLE 359
Query: 524 TSKDLR 541
T+K R
Sbjct: 360 TAKRAR 365
>Z70308-7|CAA94352.1| 508|Caenorhabditis elegans Hypothetical
protein F49E11.1a protein.
Length = 508
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +2
Query: 347 YRALELI-GSRLGCVVRLASLRVTVARVRXGQPIMSVRSSDRWKAXVIEALRXAKFKFPG 523
YRA E+I G++ G + + SL +A + G P++ + A +IE L K
Sbjct: 333 YRAPEVILGTKYGMPIDMWSLGCILAELLTGYPLLPGEDENDQLALIIELLGMPPPKSLE 392
Query: 524 TSKDLR 541
T+K R
Sbjct: 393 TAKRAR 398
>AY090019-1|AAM09088.1| 796|Caenorhabditis elegans minibrain kinase
2 protein.
Length = 796
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +2
Query: 347 YRALELI-GSRLGCVVRLASLRVTVARVRXGQPIMSVRSSDRWKAXVIEALRXAKFKFPG 523
YRA E+I G++ G + + SL +A + G P++ + A +IE L K
Sbjct: 627 YRAPEVILGTKYGMPIDMWSLGCILAELLTGYPLLPGEDENDQLALIIELLGMPPPKSLE 686
Query: 524 TSKDLR 541
T+K R
Sbjct: 687 TAKRAR 692
>AF039053-3|AAC25880.2| 349|Caenorhabditis elegans Hypothetical
protein C45H4.13 protein.
Length = 349
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = -3
Query: 278 QFFTRYLLQQIRPA--SKASELSCSYSSDTKCTHSGKSSTFALFLP 147
+FF +L Q+IR A S S S S SS + S SS+++ + P
Sbjct: 214 EFFRYFLTQRIRHARDSSGSHESYSGSSSSSSYSSSDSSSYSSYTP 259
>AF016450-13|AAB65988.2| 472|Caenorhabditis elegans Hypothetical
protein B0238.9 protein.
Length = 472
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/55 (21%), Positives = 27/55 (49%)
Frame = +2
Query: 80 INRIRNRGSVGVYLIPRSVSSIWVRRERTLTTFHCACTWCPTNMNS*AQRLWRQD 244
+ R+ + GS + +P+ +++W R+ ++L C C M Q L+ ++
Sbjct: 82 VKRLASLGSARGWTVPQRRNNLWERKGQSLIGKFCRCRCDRGQMTRDKQALYEKE 136
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,827,588
Number of Sequences: 27780
Number of extensions: 298237
Number of successful extensions: 840
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 840
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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