Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_G07
         (546 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y17702-1|CAA76822.2|  260|Anopheles gambiae putative gVAG protei...    26   0.93 
AF080546-1|AAC29475.1|  432|Anopheles gambiae S-adenosyl-L-homoc...    25   1.2  
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    23   5.0  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           23   6.6  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    23   8.7  

>Y17702-1|CAA76822.2|  260|Anopheles gambiae putative gVAG protein
           precursor protein.
          Length = 260

 Score = 25.8 bits (54), Expect = 0.93
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +1

Query: 271 LVALVTGGSSGLGKATAELLVKQGGRVVICDLPSTKGQNTAK 396
           L+ +V  G S  GK  +  L  +GG  V C+ PS+ G  T +
Sbjct: 10  LLLVVLSGVSAGGKYCSSDLCPRGGPHVGCNPPSSSGGPTCQ 51


>AF080546-1|AAC29475.1|  432|Anopheles gambiae
           S-adenosyl-L-homocysteine hydrolase protein.
          Length = 432

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +1

Query: 259 MFKGLVALVTGGSSGLGKATAELLVKQGGRVVICDL 366
           M  G V +V G    +GK  A+ L   GGRV+I ++
Sbjct: 210 MIAGKVCVVAGYGD-VGKGCAQALRGSGGRVLITEI 244


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +1

Query: 262 FKGLVALVTGGSSGLG 309
           F GLV  + GG SGLG
Sbjct: 437 FSGLVGALGGGLSGLG 452


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
 Frame = -2

Query: 389 VFWPLVEGKSQITTLPPCFTNSSAVAFPNPDDPPVTKAT-RPL 264
           VF  L +   +  T P  +     V  P P  PP +  + RPL
Sbjct: 518 VFQALYQSCLETATFPAPWKRQRLVLLPKPGKPPGSNGSYRPL 560


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
 Frame = -2

Query: 350 TLPPCFTNSSAVAFPNPDDPP-VTKATRPL 264
           T PP +     V  P P  PP  + + RPL
Sbjct: 539 TFPPQWKRQRLVLLPKPGKPPGESSSYRPL 568


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 479,478
Number of Sequences: 2352
Number of extensions: 8878
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50460840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)