Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_F21
         (444 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81557-7|CAB04538.1|  421|Caenorhabditis elegans Hypothetical pr...    28   2.7  
Z37092-6|CAE46667.1|  334|Caenorhabditis elegans Hypothetical pr...    27   6.1  
Z37092-5|CAA85456.1|  336|Caenorhabditis elegans Hypothetical pr...    27   6.1  

>Z81557-7|CAB04538.1|  421|Caenorhabditis elegans Hypothetical
           protein F59A1.13 protein.
          Length = 421

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
 Frame = -1

Query: 306 YKYNFSMTFSATS--HSITKSELRCSFHNHFIIT--GKGILFTYF 184
           + Y F++T S  S   +I   +LRC  H HF +T    GI   YF
Sbjct: 318 FAYTFAITASGLSIVGNIKCIQLRCRQHTHFALTVSSLGIYANYF 362


>Z37092-6|CAE46667.1|  334|Caenorhabditis elegans Hypothetical
           protein F44F4.5b protein.
          Length = 334

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = -1

Query: 291 SMTFSATSHSITKSELRCSFHNHFIITG-KGILFTYF 184
           S T S     I ++ L C F NH +I G  G+ F  F
Sbjct: 89  SFTLSDKPCEIMRTTLECRFQNHVLIFGIAGVNFNQF 125


>Z37092-5|CAA85456.1|  336|Caenorhabditis elegans Hypothetical
           protein F44F4.5a protein.
          Length = 336

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = -1

Query: 291 SMTFSATSHSITKSELRCSFHNHFIITG-KGILFTYF 184
           S T S     I ++ L C F NH +I G  G+ F  F
Sbjct: 89  SFTLSDKPCEIMRTTLECRFQNHVLIFGIAGVNFNQF 125


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,950,560
Number of Sequences: 27780
Number of extensions: 122092
Number of successful extensions: 200
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 200
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 767282256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)