Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_F16
         (529 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69792-6|CAA93669.2|  398|Caenorhabditis elegans Hypothetical pr...    69   2e-12
Z69790-5|CAA93657.2|  398|Caenorhabditis elegans Hypothetical pr...    69   2e-12
Z48009-9|CAA88085.1|  329|Caenorhabditis elegans Hypothetical pr...    29   2.7  
U53341-2|AAC69108.2|  645|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z46242-5|CAA86330.2|  364|Caenorhabditis elegans Hypothetical pr...    28   4.8  
U19861-1|AAA97554.2|  364|Caenorhabditis elegans mab-21 protein ...    28   4.8  
AF016449-4|AAG23998.3|  330|Caenorhabditis elegans Serpentine re...    28   4.8  

>Z69792-6|CAA93669.2|  398|Caenorhabditis elegans Hypothetical
           protein F40E10.6 protein.
          Length = 398

 Score = 68.9 bits (161), Expect = 2e-12
 Identities = 31/49 (63%), Positives = 40/49 (81%)
 Frame = +1

Query: 370 FLQTRSAQVIAGIFVFTALFITCQQIYQHLRWYTNPSEQRWIVRILFIV 516
           F+++ SAQ +AG+  + AL IT  QIYQHLR+Y+ P+EQRWIVRILFIV
Sbjct: 11  FIRSASAQGLAGLCTWAALLITSHQIYQHLRFYSCPAEQRWIVRILFIV 59


>Z69790-5|CAA93657.2|  398|Caenorhabditis elegans Hypothetical
           protein F40E10.6 protein.
          Length = 398

 Score = 68.9 bits (161), Expect = 2e-12
 Identities = 31/49 (63%), Positives = 40/49 (81%)
 Frame = +1

Query: 370 FLQTRSAQVIAGIFVFTALFITCQQIYQHLRWYTNPSEQRWIVRILFIV 516
           F+++ SAQ +AG+  + AL IT  QIYQHLR+Y+ P+EQRWIVRILFIV
Sbjct: 11  FIRSASAQGLAGLCTWAALLITSHQIYQHLRFYSCPAEQRWIVRILFIV 59


>Z48009-9|CAA88085.1|  329|Caenorhabditis elegans Hypothetical
           protein AH6.12 protein.
          Length = 329

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
 Frame = -1

Query: 250 CFPFVIKCHR*STLHTYCTQIPSIFYTSTSYTI-RFDKTMVE*QLKHKL 107
           CF F  K    ST+H Y + + S+F  + S  + +++KT+ E Q++ K+
Sbjct: 175 CFIFPKKSKARSTIHFYISTVVSLFNLAASVALNKYNKTL-EYQVRFKI 222


>U53341-2|AAC69108.2|  645|Caenorhabditis elegans Hypothetical
           protein F49E10.4a protein.
          Length = 645

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 19/57 (33%), Positives = 31/57 (54%)
 Frame = +1

Query: 316 QRISEIVHDVLKPLQEPIFLQTRSAQVIAGIFVFTALFITCQQIYQHLRWYTNPSEQ 486
           Q +SEI + +  PL E I+L+     V  G+ + T   + C+Q++  L W+T   EQ
Sbjct: 62  QLVSEIPYTL--PLLEAIYLKCELRTVEDGLILPTKE-LCCEQLFCQLVWWTAFCEQ 115


>Z46242-5|CAA86330.2|  364|Caenorhabditis elegans Hypothetical
           protein F35G12.6 protein.
          Length = 364

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
 Frame = +1

Query: 301 VNITAQRISEIVHDVLKPL--QEPIFLQTRS 387
           V  T QRI+++V ++LK +  QEP F+ T S
Sbjct: 27  VTKTVQRIAKVVQEILKEVEAQEPRFINTLS 57


>U19861-1|AAA97554.2|  364|Caenorhabditis elegans mab-21 protein
           protein.
          Length = 364

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
 Frame = +1

Query: 301 VNITAQRISEIVHDVLKPL--QEPIFLQTRS 387
           V  T QRI+++V ++LK +  QEP F+ T S
Sbjct: 27  VTKTVQRIAKVVQEILKEVEAQEPRFINTLS 57


>AF016449-4|AAG23998.3|  330|Caenorhabditis elegans Serpentine
           receptor, class t protein16 protein.
          Length = 330

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 10/42 (23%), Positives = 22/42 (52%)
 Frame = +1

Query: 397 IAGIFVFTALFITCQQIYQHLRWYTNPSEQRWIVRILFIVHY 522
           I G++ F A F+T   ++  + W+ +P+  +     +  +HY
Sbjct: 172 ICGVYFFVATFLTKPVVFNPMSWFFDPNVGKDPSIYISTIHY 213


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,902,050
Number of Sequences: 27780
Number of extensions: 248415
Number of successful extensions: 634
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 634
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1038911524
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)