Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_F15
(417 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1031 - 33626527-33626580,33627482-33627563,33628892-33628911 58 2e-09
07_03_1305 - 25638531-25638584,25638909-25638990,25639087-256391... 55 2e-08
03_03_0210 + 15470680-15470715,15473088-15473342,15473417-154734... 55 2e-08
04_04_0390 - 24882572-24882577,24882928-24883009,24883089-248832... 36 0.013
04_04_0293 - 24189344-24189350,24189804-24190026,24190411-241905... 31 0.28
04_04_1615 + 34793511-34793660,34794013-34794070,34794163-347944... 31 0.37
09_06_0272 - 21962495-21962524,21962742-21962918 31 0.49
05_05_0223 - 23406814-23407477,23407597-23407919 31 0.49
06_03_0640 - 23059473-23060489,23060592-23060651,23063163-230632... 29 1.1
02_05_0832 - 32077490-32078782 29 1.1
05_01_0431 + 3412178-3412336,3413012-3413109,3413185-3413312,341... 28 2.6
01_05_0315 + 20803035-20803154,20803235-20804089,20804171-208043... 28 3.5
07_01_0408 - 3137705-3138017,3139361-3139371,3140693-3140770,314... 27 4.6
06_01_1095 + 8984363-8984789,8985175-8985416,8985500-8985622,898... 27 4.6
11_01_0298 - 2231063-2232015,2232124-2232798,2232918-2232946,223... 27 6.0
03_05_1133 - 30614901-30615389,30615823-30615933,30616113-306161... 27 6.0
06_01_0294 + 2151131-2151529 27 8.0
>02_05_1031 - 33626527-33626580,33627482-33627563,33628892-33628911
Length = 51
Score = 58.4 bits (135), Expect = 2e-09
Identities = 21/42 (50%), Positives = 29/42 (69%)
Frame = +1
Query: 184 CQKVRGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAG 309
C + +GE + C + + YRSLCP EW+++W QRA GTFAG
Sbjct: 8 CIEAKGEGSDECTKYAKCYRSLCPGEWIERWKEQRANGTFAG 49
>07_03_1305 -
25638531-25638584,25638909-25638990,25639087-25639169,
25639252-25639515,25639984-25640060,25640183-25640277,
25640953-25641065
Length = 255
Score = 55.2 bits (127), Expect = 2e-08
Identities = 20/42 (47%), Positives = 27/42 (64%)
Frame = +1
Query: 184 CQKVRGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAG 309
C +GE C F + YRSLCP+EW+++W+ QR GTF G
Sbjct: 212 CVAAKGEGAPECEKFAKYYRSLCPSEWIERWNEQRENGTFPG 253
Score = 35.9 bits (79), Expect = 0.013
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +3
Query: 126 FPNQNQTRHCYQSYVDFHR 182
FP NQTRHC+ Y+++HR
Sbjct: 193 FPTTNQTRHCFTRYIEYHR 211
>03_03_0210 +
15470680-15470715,15473088-15473342,15473417-15473499,
15473617-15473698,15474886-15474939
Length = 169
Score = 55.2 bits (127), Expect = 2e-08
Identities = 21/42 (50%), Positives = 26/42 (61%)
Frame = +1
Query: 184 CQKVRGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAG 309
C +GE C F + YRSLCP EWV++W+ QR GTF G
Sbjct: 126 CVAAKGEDAPECDKFAKYYRSLCPGEWVERWNEQRENGTFPG 167
Score = 36.3 bits (80), Expect = 0.010
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 126 FPNQNQTRHCYQSYVDFHR 182
FP NQTRHC+ YV++HR
Sbjct: 107 FPTTNQTRHCFTRYVEYHR 125
>04_04_0390 -
24882572-24882577,24882928-24883009,24883089-24883200,
24883411-24883441
Length = 76
Score = 35.9 bits (79), Expect = 0.013
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +3
Query: 126 FPNQNQTRHCYQSYVDFHR 182
FP NQTRHC+ Y+++HR
Sbjct: 30 FPTTNQTRHCFTRYIEYHR 48
Score = 34.7 bits (76), Expect = 0.030
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +1
Query: 184 CQKVRGEKYEPCYYFKRVYRSLCPNEW 264
C +GE C F + YRSLCP EW
Sbjct: 49 CVNAKGEATADCEKFAKYYRSLCPAEW 75
>04_04_0293 -
24189344-24189350,24189804-24190026,24190411-24190529,
24191331-24191578
Length = 198
Score = 31.5 bits (68), Expect = 0.28
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = +2
Query: 77 MIKSPADLKTAPFDPRX--P*PKSDEALLPKLRGLPPXARKFAAKNTSHATISRECTGLS 250
M +SPA AP P P PK+ P + P A A K T+ A + + T +
Sbjct: 1 MSQSPA--APAPKAPAAAGPAPKATAPAGPARKA--PAAAGPAPKATAPAGPAPKATATA 56
Query: 251 APMSGSTSGTTSAPKAPSPV 310
AP S + S +P+APSPV
Sbjct: 57 APSSKAPSPAAPSPEAPSPV 76
>04_04_1615 +
34793511-34793660,34794013-34794070,34794163-34794410,
34794485-34794601,34795309-34795369,34795860-34795954,
34796048-34796122,34796316-34796401,34796529-34796578,
34796667-34796707,34796784-34796948,34797204-34797271,
34797362-34797422,34797878-34798393
Length = 596
Score = 31.1 bits (67), Expect = 0.37
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +2
Query: 158 PKLRGLPPXARKFAAKNTSHATISRECTGLSAPMSGSTSGTTSAPKAPSPVGFRS*T 328
P + GLPP + + +SH + R+ + LSAP S S G ++ S GF S T
Sbjct: 519 PGVVGLPPL-HSVSTQGSSHPMLQRQASSLSAPSSPSPRG-GGMTRSMSMPGFASLT 573
>09_06_0272 - 21962495-21962524,21962742-21962918
Length = 68
Score = 30.7 bits (66), Expect = 0.49
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -3
Query: 322 GSKSYRRRCLRRAGCPTCRPTHWGRET 242
G +R++ G P CRP HW R T
Sbjct: 11 GGGDFRQKVWSMTGGPYCRPVHWRRNT 37
>05_05_0223 - 23406814-23407477,23407597-23407919
Length = 328
Score = 30.7 bits (66), Expect = 0.49
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 194 FAAKNTSHATISRECTGLSAPMSGSTSGTTSAPKAPS 304
FA+ N A++S C+G A + TS +S P+AP+
Sbjct: 219 FASSNGGDASVSWPCSGDDAQNNSETSHESSPPEAPA 255
>06_03_0640 - 23059473-23060489,23060592-23060651,23063163-23063283,
23063476-23065496
Length = 1072
Score = 29.5 bits (63), Expect = 1.1
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = +3
Query: 90 PPTSKQHLSTHGFPNQNQTRHC-YQSYVDFHRLPESSRRKIRAMLLFQESVQVSLP 254
PP H H + Q+Q + YQS +H ES +A + S Q S+P
Sbjct: 955 PPPGPVHQQMHAYHQQHQQQQQHYQSIQQYHATQESQNTLSQAYYVQSHSQQHSVP 1010
>02_05_0832 - 32077490-32078782
Length = 430
Score = 29.5 bits (63), Expect = 1.1
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +2
Query: 119 PRXP*PKSDEALLPKLRGLPPXARKFAAKNTSHATISRECTGLSAPMSGST-SGTTSAPK 295
PR P KS P+LRG F +T+ A ++ + L A + +GT S+PK
Sbjct: 227 PRSPISKSP-MWSPRLRGKVGSGVDFDPFSTALAKAAKGPSPLGAGAKDTADAGTASSPK 285
Query: 296 APSPVGFRS 322
P PV S
Sbjct: 286 KPDPVSVTS 294
>05_01_0431 +
3412178-3412336,3413012-3413109,3413185-3413312,
3413770-3413881,3414309-3414489,3414714-3414896,
3415133-3415315,3416062-3416131,3416413-3416522,
3416604-3416908,3417079-3417175,3417622-3417765,
3418217-3418303,3418387-3418473,3418566-3418706,
3418805-3418930,3419166-3419264,3419690-3419757,
3420275-3420341,3420713-3420883,3420959-3421048,
3421831-3421911,3423397-3423470,3423784-3423855,
3423925-3424017,3424138-3424204
Length = 1030
Score = 28.3 bits (60), Expect = 2.6
Identities = 10/38 (26%), Positives = 22/38 (57%)
Frame = +1
Query: 223 YFKRVYRSLCPNEWVDKWDNQRAEGTFAGRI*ILNVPD 336
+F R ++ L PNEW++ ++ + +G + L++ D
Sbjct: 879 HFLRGFQQLIPNEWINMFNEHEFQVLISGSLESLDIDD 916
>01_05_0315 +
20803035-20803154,20803235-20804089,20804171-20804350,
20805191-20805286,20805895-20806179
Length = 511
Score = 27.9 bits (59), Expect = 3.5
Identities = 15/61 (24%), Positives = 29/61 (47%)
Frame = +3
Query: 90 PPTSKQHLSTHGFPNQNQTRHCYQSYVDFHRLPESSRRKIRAMLLFQESVQVSLPQ*VGR 269
P ++ L+ ++ +VDF LPE +I + L +++VQ+S+ V R
Sbjct: 7 PVNKRRRLALSPCAEVYNSKRIRSQWVDFQSLPEDILSRIMSKLTLKQAVQMSMVSSVFR 66
Query: 270 Q 272
+
Sbjct: 67 R 67
>07_01_0408 -
3137705-3138017,3139361-3139371,3140693-3140770,
3141105-3141206,3141309-3141380,3141484-3141558
Length = 216
Score = 27.5 bits (58), Expect = 4.6
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +2
Query: 152 LLPKLRGLPPXARKFAAKNTSHATISRECTGLSAPMSGSTSGTTSAPKAPSP 307
L+P +RG P + AA + +T +R + L+ +S T SA + P
Sbjct: 40 LVPVIRGATPFSSAVAAAAAAASTPARSSSALTQTLSFPIQATRSAATSTPP 91
>06_01_1095 +
8984363-8984789,8985175-8985416,8985500-8985622,
8985783-8985899,8986258-8986399,8986587-8986627,
8987194-8987453,8987505-8987607,8987698-8987776,
8987856-8988115
Length = 597
Score = 27.5 bits (58), Expect = 4.6
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -1
Query: 285 LVVPLVDPLIGAERPVHSLEIVAWLVFFAANFLAXGGSP 169
++VP +D ++GAE P ++ I A L L GSP
Sbjct: 225 IIVPFLDGILGAEIPAYTW-IGALLSLIGVGILELSGSP 262
>11_01_0298 - 2231063-2232015,2232124-2232798,2232918-2232946,
2233053-2233513,2233593-2233717,2233801-2234098,
2235004-2236234,2236562-2237233,2237329-2238539
Length = 1884
Score = 27.1 bits (57), Expect = 6.0
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +1
Query: 154 ATKVTWTSTXCQKVRGEKYEPCYYF 228
A W C V G++YEP YF
Sbjct: 1749 AANCPWNDISCGSVAGDEYEPQTYF 1773
>03_05_1133 -
30614901-30615389,30615823-30615933,30616113-30616178,
30616347-30616406,30616493-30616801,30616960-30617108,
30617200-30617269,30617370-30617494,30617516-30617573,
30618176-30618370,30618585-30618857,30618950-30619120,
30619203-30619333,30619423-30619582,30619712-30619900,
30620023-30620118,30620381-30620611,30620715-30620853,
30620903-30621057,30621160-30621378
Length = 1131
Score = 27.1 bits (57), Expect = 6.0
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 141 QTRHCYQSYVDFHRLPESSRRKIRAMLLFQESVQV 245
Q CY Y +++LPE R + ++ L +S+QV
Sbjct: 662 QPGECYHLYPRYYQLPELLRTPLNSLCLQIKSLQV 696
>06_01_0294 + 2151131-2151529
Length = 132
Score = 26.6 bits (56), Expect = 8.0
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +2
Query: 158 PKLRGLPPXARKFAAKNTSHATISRECTGLSAPMSGSTSGTTSAPKAPS 304
P + G PP R+ ++ T+ CT L+ ++G+TS + + P+
Sbjct: 39 PNVGGRPP--RRLRSQATTSMIRCSSCTSLTILLTGATSSVNGSNQMPT 85
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,227,832
Number of Sequences: 37544
Number of extensions: 225109
Number of successful extensions: 763
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 762
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 754585524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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