Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_F15
(417 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024859-18|AAK29974.1| 121|Caenorhabditis elegans Hypothetical... 53 1e-07
Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical pr... 31 0.44
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 31 0.44
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 31 0.44
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 31 0.44
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 31 0.44
AC024777-4|AAF60561.3| 627|Caenorhabditis elegans Hypothetical ... 30 0.59
Z66495-4|CAA91271.1| 954|Caenorhabditis elegans Hypothetical pr... 30 0.78
AF039718-5|AAP68905.1| 760|Caenorhabditis elegans Prion-like-(q... 30 0.78
AF039718-4|AAP68906.2| 696|Caenorhabditis elegans Prion-like-(q... 30 0.78
AL032631-9|CAA21575.2| 893|Caenorhabditis elegans Hypothetical ... 29 1.8
Z66494-12|CAE17686.1| 1007|Caenorhabditis elegans Hypothetical p... 28 2.4
Z66494-11|CAA91265.2| 1048|Caenorhabditis elegans Hypothetical p... 28 2.4
Z54284-8|CAE17775.1| 1007|Caenorhabditis elegans Hypothetical pr... 28 2.4
Z54284-7|CAA91065.2| 1048|Caenorhabditis elegans Hypothetical pr... 28 2.4
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 26 9.5
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 26 9.5
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 26 9.5
AF000263-15|AAG00018.1| 416|Caenorhabditis elegans Hypothetical... 26 9.5
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 26 9.5
>AC024859-18|AAK29974.1| 121|Caenorhabditis elegans Hypothetical
protein Y71H2AM.5 protein.
Length = 121
Score = 52.8 bits (121), Expect = 1e-07
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = +1
Query: 184 CQKVRGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAGR 312
C ++ G+ Y+PC +F+ VY+ CP W ++WD +EG F +
Sbjct: 76 CNELMGQDYKPCKFFQNVYKDFCPGFWTERWDELLSEGRFPAK 118
Score = 30.7 bits (66), Expect = 0.44
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 126 FPNQNQTRHCYQSYVDFHRLPESSRRKIRAMLLFQ 230
FP + R C+ YVDFHR E + + FQ
Sbjct: 57 FPQVRKQRQCFAYYVDFHRCNELMGQDYKPCKFFQ 91
>Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical
protein F25D7.4 protein.
Length = 932
Score = 30.7 bits (66), Expect = 0.44
Identities = 23/79 (29%), Positives = 38/79 (48%)
Frame = +2
Query: 83 KSPADLKTAPFDPRXP*PKSDEALLPKLRGLPPXARKFAAKNTSHATISRECTGLSAPMS 262
++P ++AP PR K+ +A P A+K A A S+ + +SAP +
Sbjct: 369 RAPIPARSAPAPPRGAPAKAPKA--------EPIAQKKVAGKVQRAAPSKPASAVSAPKA 420
Query: 263 GSTSGTTSAPKAPSPVGFR 319
+ + T+SAP A +P R
Sbjct: 421 TAPASTSSAP-ATAPEASR 438
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 30.7 bits (66), Expect = 0.44
Identities = 20/59 (33%), Positives = 28/59 (47%)
Frame = +2
Query: 128 P*PKSDEALLPKLRGLPPXARKFAAKNTSHATISRECTGLSAPMSGSTSGTTSAPKAPS 304
P P DE KLR P RK ++ ++ T SR+ + SG+T + SA A S
Sbjct: 306 PPPGGDEK---KLRAGSPSTRKSPSRKSASPTPSRKGSSAGGAASGTTGASASATSATS 361
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 30.7 bits (66), Expect = 0.44
Identities = 20/59 (33%), Positives = 28/59 (47%)
Frame = +2
Query: 128 P*PKSDEALLPKLRGLPPXARKFAAKNTSHATISRECTGLSAPMSGSTSGTTSAPKAPS 304
P P DE KLR P RK ++ ++ T SR+ + SG+T + SA A S
Sbjct: 306 PPPGGDEK---KLRAGSPSTRKSPSRKSASPTPSRKGSSAGGAASGTTGASASATSATS 361
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 30.7 bits (66), Expect = 0.44
Identities = 20/59 (33%), Positives = 28/59 (47%)
Frame = +2
Query: 128 P*PKSDEALLPKLRGLPPXARKFAAKNTSHATISRECTGLSAPMSGSTSGTTSAPKAPS 304
P P DE KLR P RK ++ ++ T SR+ + SG+T + SA A S
Sbjct: 306 PPPGGDEK---KLRAGSPSTRKSPSRKSASPTPSRKGSSAGGAASGTTGASASATSATS 361
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 30.7 bits (66), Expect = 0.44
Identities = 20/59 (33%), Positives = 28/59 (47%)
Frame = +2
Query: 128 P*PKSDEALLPKLRGLPPXARKFAAKNTSHATISRECTGLSAPMSGSTSGTTSAPKAPS 304
P P DE KLR P RK ++ ++ T SR+ + SG+T + SA A S
Sbjct: 306 PPPGGDEK---KLRAGSPSTRKSPSRKSASPTPSRKGSSAGGAASGTTGASASATSATS 361
>AC024777-4|AAF60561.3| 627|Caenorhabditis elegans Hypothetical
protein Y42H9AR.4 protein.
Length = 627
Score = 30.3 bits (65), Expect = 0.59
Identities = 15/51 (29%), Positives = 29/51 (56%)
Frame = +2
Query: 167 RGLPPXARKFAAKNTSHATISRECTGLSAPMSGSTSGTTSAPKAPSPVGFR 319
R PP +R+ + + + S++ + + +S +T+GT SAP+ S G+R
Sbjct: 222 RAPPPASRRKSLNTSLNGKNSKKVSISNEVISPTTNGTRSAPRKASLAGYR 272
>Z66495-4|CAA91271.1| 954|Caenorhabditis elegans Hypothetical
protein C36A4.5 protein.
Length = 954
Score = 29.9 bits (64), Expect = 0.78
Identities = 24/80 (30%), Positives = 38/80 (47%)
Frame = +2
Query: 80 IKSPADLKTAPFDPRXP*PKSDEALLPKLRGLPPXARKFAAKNTSHATISRECTGLSAPM 259
I++P K+AP PR K+ +A A+K A A S+ + +SAP
Sbjct: 390 IRAPIPAKSAPAPPRGAPAKAAKA--------EAIAQKKVAGKVQRAAPSKPASAVSAPK 441
Query: 260 SGSTSGTTSAPKAPSPVGFR 319
+ + + T+SAP A +P R
Sbjct: 442 ATAPASTSSAP-ATAPEASR 460
>AF039718-5|AAP68905.1| 760|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform a protein.
Length = 760
Score = 29.9 bits (64), Expect = 0.78
Identities = 23/94 (24%), Positives = 38/94 (40%), Gaps = 4/94 (4%)
Frame = +2
Query: 71 PEMIKSPADLKTAPFDPRXP*PKSDEALLPKLRG---LP-PXARKFAAKNTSHATISREC 238
P +++ AP +P P ++ E P L LP P +K + H+ + ++
Sbjct: 652 PPVLRPAFSESKAPQEPSKP-VETKENNKPALTDDFPLPEPLPQKPKIETNHHSAVEKDA 710
Query: 239 TGLSAPMSGSTSGTTSAPKAPSPVGFRS*TFPML 340
+ ++ AP APSP F FP L
Sbjct: 711 EKIKVRSPPVVVASSPAPAAPSPFSFEETAFPSL 744
>AF039718-4|AAP68906.2| 696|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform b protein.
Length = 696
Score = 29.9 bits (64), Expect = 0.78
Identities = 23/94 (24%), Positives = 38/94 (40%), Gaps = 4/94 (4%)
Frame = +2
Query: 71 PEMIKSPADLKTAPFDPRXP*PKSDEALLPKLRG---LP-PXARKFAAKNTSHATISREC 238
P +++ AP +P P ++ E P L LP P +K + H+ + ++
Sbjct: 554 PPVLRPAFSESKAPQEPSKP-VETKENNKPALTDDFPLPEPLPQKPKIETNHHSAVEKDA 612
Query: 239 TGLSAPMSGSTSGTTSAPKAPSPVGFRS*TFPML 340
+ ++ AP APSP F FP L
Sbjct: 613 EKIKVRSPPVVVASSPAPAAPSPFSFEETAFPSL 646
>AL032631-9|CAA21575.2| 893|Caenorhabditis elegans Hypothetical
protein Y106G6H.7 protein.
Length = 893
Score = 28.7 bits (61), Expect = 1.8
Identities = 20/63 (31%), Positives = 29/63 (46%)
Frame = +2
Query: 134 PKSDEALLPKLRGLPPXARKFAAKNTSHATISRECTGLSAPMSGSTSGTTSAPKAPSPVG 313
PK+ + LP LP +K +A T+ ISR L + S S T A ++ VG
Sbjct: 547 PKNPDPSLPNSEALPTRRQKISAAWTADDDISRLLMSLPNWHAASISPMTPAVESELDVG 606
Query: 314 FRS 322
R+
Sbjct: 607 ERN 609
>Z66494-12|CAE17686.1| 1007|Caenorhabditis elegans Hypothetical
protein D2085.5b protein.
Length = 1007
Score = 28.3 bits (60), Expect = 2.4
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = -3
Query: 400 HILFY*ITSFDLIKTNXNKLKHRERLGSKSYRRRCLRRAGCPTCRPTHWG 251
H LF + D++ +KL+ + RR CLR C PT +G
Sbjct: 136 HFLF----ALDIVMIESSKLRLHPSISEVEVRRACLRALSSVICWPTTFG 181
>Z66494-11|CAA91265.2| 1048|Caenorhabditis elegans Hypothetical
protein D2085.5a protein.
Length = 1048
Score = 28.3 bits (60), Expect = 2.4
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = -3
Query: 400 HILFY*ITSFDLIKTNXNKLKHRERLGSKSYRRRCLRRAGCPTCRPTHWG 251
H LF + D++ +KL+ + RR CLR C PT +G
Sbjct: 177 HFLF----ALDIVMIESSKLRLHPSISEVEVRRACLRALSSVICWPTTFG 222
>Z54284-8|CAE17775.1| 1007|Caenorhabditis elegans Hypothetical
protein D2085.5b protein.
Length = 1007
Score = 28.3 bits (60), Expect = 2.4
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = -3
Query: 400 HILFY*ITSFDLIKTNXNKLKHRERLGSKSYRRRCLRRAGCPTCRPTHWG 251
H LF + D++ +KL+ + RR CLR C PT +G
Sbjct: 136 HFLF----ALDIVMIESSKLRLHPSISEVEVRRACLRALSSVICWPTTFG 181
>Z54284-7|CAA91065.2| 1048|Caenorhabditis elegans Hypothetical
protein D2085.5a protein.
Length = 1048
Score = 28.3 bits (60), Expect = 2.4
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = -3
Query: 400 HILFY*ITSFDLIKTNXNKLKHRERLGSKSYRRRCLRRAGCPTCRPTHWG 251
H LF + D++ +KL+ + RR CLR C PT +G
Sbjct: 177 HFLF----ALDIVMIESSKLRLHPSISEVEVRRACLRALSSVICWPTTFG 222
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 26.2 bits (55), Expect = 9.5
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 221 TISRECTGLSAPMSGSTSGTTSAPKAPSP 307
+++ E T S SGS+ GT S +PSP
Sbjct: 451 SVATEVTSQSTVPSGSSLGTQSTNSSPSP 479
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 26.2 bits (55), Expect = 9.5
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 221 TISRECTGLSAPMSGSTSGTTSAPKAPSP 307
+++ E T S SGS+ GT S +PSP
Sbjct: 658 SVATEVTSQSTVPSGSSLGTQSTNSSPSP 686
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 26.2 bits (55), Expect = 9.5
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 221 TISRECTGLSAPMSGSTSGTTSAPKAPSP 307
+++ E T S SGS+ GT S +PSP
Sbjct: 658 SVATEVTSQSTVPSGSSLGTQSTNSSPSP 686
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +2
Query: 206 NTSHATISRECTGLSAPMSGSTSGTTSAPKAPSPVG 313
+T H T+S+ +G ++P + S +G+T + S G
Sbjct: 1442 STQHTTMSKASSGSTSPSTNSQTGSTVTMGSSSTSG 1477
>AF000263-15|AAG00018.1| 416|Caenorhabditis elegans Hypothetical
protein T08B2.11 protein.
Length = 416
Score = 26.2 bits (55), Expect = 9.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 221 TISRECTGLSAPMSGSTSGTTSAPKA 298
T ++ + LSA + G TSG APKA
Sbjct: 101 THRKKKSSLSASLEGKTSGENEAPKA 126
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 26.2 bits (55), Expect = 9.5
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = +2
Query: 176 PPXARKF---AAKNTSHATISRECTGLSAPMSGSTSGTTSAPKAPSPVG 313
PP A + A+ + A++S C ++A + + + S+PK PS G
Sbjct: 286 PPDALTYLQPASVSAIPASVSVACAAITAKVMAAEAAAGSSPKTPSESG 334
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,369,878
Number of Sequences: 27780
Number of extensions: 184180
Number of successful extensions: 613
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 613
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 683806592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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