Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_F11
         (651 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            26   1.2  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            26   1.2  
AY330182-1|AAQ16288.1|  181|Anopheles gambiae odorant-binding pr...    25   1.6  
AF080546-1|AAC29475.1|  432|Anopheles gambiae S-adenosyl-L-homoc...    25   2.1  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 63   FGEIIEPSSRTTWEDWDENNSS 128
            + E+  P+ RT W D D  NSS
Sbjct: 1682 YDELNRPAVRTKWTDLDTTNSS 1703


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 63   FGEIIEPSSRTTWEDWDENNSS 128
            + E+  P+ RT W D D  NSS
Sbjct: 1683 YDELNRPAVRTKWTDLDTTNSS 1704


>AY330182-1|AAQ16288.1|  181|Anopheles gambiae odorant-binding
           protein AgamOBP56 protein.
          Length = 181

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = -3

Query: 163 CF*NCKLVCVSVELLFSSQSSQVVRLDGSIISPKLFIF 50
           CF   +++C ++E +   +  +VV  DG++I PKL  F
Sbjct: 54  CFMEMEVIC-AMECV--GRKKEVVNEDGTLIEPKLMEF 88


>AF080546-1|AAC29475.1|  432|Anopheles gambiae
           S-adenosyl-L-homocysteine hydrolase protein.
          Length = 432

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = +1

Query: 58  IISEKLLNHQAEL-LGKIGMKITVLQIRKPIY 150
           ++ +KL +  A L L K+G+K+T L  R+P Y
Sbjct: 385 VLPKKLDDEVAALHLDKLGVKLTKLSARQPEY 416


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 668,834
Number of Sequences: 2352
Number of extensions: 12732
Number of successful extensions: 66
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)