Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_F11
(651 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR541852-1|CAG46650.1| 288|Homo sapiens DSCR2 protein. 35 0.29
CR541821-1|CAG46620.1| 288|Homo sapiens DSCR2 protein. 35 0.29
BC012809-1|AAH12809.1| 288|Homo sapiens Down syndrome critical ... 35 0.29
BC011755-1|AAH11755.1| 288|Homo sapiens Down syndrome critical ... 35 0.29
BC010424-1|AAH10424.1| 288|Homo sapiens Down syndrome critical ... 35 0.29
BC003619-1|AAH03619.1| 288|Homo sapiens Down syndrome critical ... 35 0.29
AY463963-1|AAR25628.1| 267|Homo sapiens Down syndrome critical ... 35 0.29
AL163279-1|CAB90451.1| 288|Homo sapiens leucine rich protein C2... 35 0.29
AJ006291-1|CAA06957.1| 288|Homo sapiens leucine rich protein pr... 35 0.29
AL512665-1|CAI16956.1| 655|Homo sapiens potassium voltage-gated... 34 0.38
AL450997-1|CAI19096.1| 655|Homo sapiens potassium voltage-gated... 34 0.38
AL049557-2|CAI22711.1| 655|Homo sapiens potassium voltage-gated... 34 0.38
AF205857-1|AAF20925.1| 655|Homo sapiens potassium ionic channel... 34 0.38
AF166011-1|AAF68177.1| 655|Homo sapiens voltage-gated potassium... 34 0.38
AF120491-1|AAD38898.1| 655|Homo sapiens Sha1-related potassium ... 34 0.38
AF048713-1|AAC05122.1| 655|Homo sapiens Kv4.3 potassium channel... 34 0.38
AF187963-1|AAF01044.1| 655|Homo sapiens voltage gated potassium... 34 0.51
>CR541852-1|CAG46650.1| 288|Homo sapiens DSCR2 protein.
Length = 288
Score = 34.7 bits (76), Expect = 0.29
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Frame = +3
Query: 405 ISMIT-KPLVEYATSEVCHE--ECVIRRLSTKNCKNSSLSKYPCLEQPNIISGISAGVVC 575
I+++T + + +Y TSE +R L T+N K+S+ P LEQPNI+ + A V+
Sbjct: 164 ITILTCRHVTDYKTSESTGSLPSPFLRALKTQNFKDSACC--PLLEQPNIVHDLPAAVLS 221
Query: 576 LREHLDLSALALVFYTE 626
+ + A+ + YT+
Sbjct: 222 YCQVWKIPAILYLCYTD 238
>CR541821-1|CAG46620.1| 288|Homo sapiens DSCR2 protein.
Length = 288
Score = 34.7 bits (76), Expect = 0.29
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Frame = +3
Query: 405 ISMIT-KPLVEYATSEVCHE--ECVIRRLSTKNCKNSSLSKYPCLEQPNIISGISAGVVC 575
I+++T + + +Y TSE +R L T+N K+S+ P LEQPNI+ + A V+
Sbjct: 164 ITILTCRHVTDYKTSESTGSLPSPFLRALKTQNFKDSACC--PLLEQPNIVHDLPAAVLS 221
Query: 576 LREHLDLSALALVFYTE 626
+ + A+ + YT+
Sbjct: 222 YCQVWKIPAILYLCYTD 238
>BC012809-1|AAH12809.1| 288|Homo sapiens Down syndrome critical
region gene 2 protein.
Length = 288
Score = 34.7 bits (76), Expect = 0.29
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Frame = +3
Query: 405 ISMIT-KPLVEYATSEVCHE--ECVIRRLSTKNCKNSSLSKYPCLEQPNIISGISAGVVC 575
I+++T + + +Y TSE +R L T+N K+S+ P LEQPNI+ + A V+
Sbjct: 164 ITILTCRHVTDYKTSESTGSLPSPFLRALKTQNFKDSACC--PLLEQPNIVHDLPAAVLS 221
Query: 576 LREHLDLSALALVFYTE 626
+ + A+ + YT+
Sbjct: 222 YCQVWKIPAILYLCYTD 238
>BC011755-1|AAH11755.1| 288|Homo sapiens Down syndrome critical
region gene 2 protein.
Length = 288
Score = 34.7 bits (76), Expect = 0.29
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Frame = +3
Query: 405 ISMIT-KPLVEYATSEVCHE--ECVIRRLSTKNCKNSSLSKYPCLEQPNIISGISAGVVC 575
I+++T + + +Y TSE +R L T+N K+S+ P LEQPNI+ + A V+
Sbjct: 164 ITILTCRHVTDYKTSESTGSLPSPFLRALKTQNFKDSACC--PLLEQPNIVHDLPAAVLS 221
Query: 576 LREHLDLSALALVFYTE 626
+ + A+ + YT+
Sbjct: 222 YCQVWKIPAILYLCYTD 238
>BC010424-1|AAH10424.1| 288|Homo sapiens Down syndrome critical
region gene 2 protein.
Length = 288
Score = 34.7 bits (76), Expect = 0.29
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Frame = +3
Query: 405 ISMIT-KPLVEYATSEVCHE--ECVIRRLSTKNCKNSSLSKYPCLEQPNIISGISAGVVC 575
I+++T + + +Y TSE +R L T+N K+S+ P LEQPNI+ + A V+
Sbjct: 164 ITILTCRHVTDYKTSESTGSLPSPFLRALKTQNFKDSACC--PLLEQPNIVHDLPAAVLS 221
Query: 576 LREHLDLSALALVFYTE 626
+ + A+ + YT+
Sbjct: 222 YCQVWKIPAILYLCYTD 238
>BC003619-1|AAH03619.1| 288|Homo sapiens Down syndrome critical
region gene 2 protein.
Length = 288
Score = 34.7 bits (76), Expect = 0.29
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Frame = +3
Query: 405 ISMIT-KPLVEYATSEVCHE--ECVIRRLSTKNCKNSSLSKYPCLEQPNIISGISAGVVC 575
I+++T + + +Y TSE +R L T+N K+S+ P LEQPNI+ + A V+
Sbjct: 164 ITILTCRHVTDYKTSESTGSLPSPFLRALKTQNFKDSACC--PLLEQPNIVHDLPAAVLS 221
Query: 576 LREHLDLSALALVFYTE 626
+ + A+ + YT+
Sbjct: 222 YCQVWKIPAILYLCYTD 238
>AY463963-1|AAR25628.1| 267|Homo sapiens Down syndrome critical
region protein 2 protein.
Length = 267
Score = 34.7 bits (76), Expect = 0.29
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Frame = +3
Query: 405 ISMIT-KPLVEYATSEVCHE--ECVIRRLSTKNCKNSSLSKYPCLEQPNIISGISAGVVC 575
I+++T + + +Y TSE +R L T+N K+S+ P LEQPNI+ + A V+
Sbjct: 143 ITILTCRHVTDYKTSESTGSLPSPFLRALKTQNFKDSACC--PLLEQPNIVHDLPAAVLS 200
Query: 576 LREHLDLSALALVFYTE 626
+ + A+ + YT+
Sbjct: 201 YCQVWKIPAILYLCYTD 217
>AL163279-1|CAB90451.1| 288|Homo sapiens leucine rich protein
C21-LRP protein.
Length = 288
Score = 34.7 bits (76), Expect = 0.29
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Frame = +3
Query: 405 ISMIT-KPLVEYATSEVCHE--ECVIRRLSTKNCKNSSLSKYPCLEQPNIISGISAGVVC 575
I+++T + + +Y TSE +R L T+N K+S+ P LEQPNI+ + A V+
Sbjct: 164 ITILTCRHVTDYKTSESTGSLPSPFLRALKTQNFKDSACC--PLLEQPNIVHDLPAAVLS 221
Query: 576 LREHLDLSALALVFYTE 626
+ + A+ + YT+
Sbjct: 222 YCQVWKIPAILYLCYTD 238
>AJ006291-1|CAA06957.1| 288|Homo sapiens leucine rich protein
protein.
Length = 288
Score = 34.7 bits (76), Expect = 0.29
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Frame = +3
Query: 405 ISMIT-KPLVEYATSEVCHE--ECVIRRLSTKNCKNSSLSKYPCLEQPNIISGISAGVVC 575
I+++T + + +Y TSE +R L T+N K+S+ P LEQPNI+ + A V+
Sbjct: 164 ITILTCRHVTDYKTSESTGSLPSPFLRALKTQNFKDSACC--PLLEQPNIVHDLPAAVLS 221
Query: 576 LREHLDLSALALVFYTE 626
+ + A+ + YT+
Sbjct: 222 YCQVWKIPAILYLCYTD 238
>AL512665-1|CAI16956.1| 655|Homo sapiens potassium voltage-gated
channel, Shal-related subfamily, member 3 protein.
Length = 655
Score = 34.3 bits (75), Expect = 0.38
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = +3
Query: 411 MITKPLVEYATSEVCHEECVIRRLSTKNCKNSSLSKYPCLEQPNIISGISAGVVC 575
++ PL+ TS + + E + ++ +NC SS+ YP P++ S C
Sbjct: 492 LVDDPLLSVRTSTIKNHEFIDEQMFEQNCMESSMQNYPSTRSPSLSSHPGLTTTC 546
>AL450997-1|CAI19096.1| 655|Homo sapiens potassium voltage-gated
channel, Shal-related subfamily, member 3 protein.
Length = 655
Score = 34.3 bits (75), Expect = 0.38
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = +3
Query: 411 MITKPLVEYATSEVCHEECVIRRLSTKNCKNSSLSKYPCLEQPNIISGISAGVVC 575
++ PL+ TS + + E + ++ +NC SS+ YP P++ S C
Sbjct: 492 LVDDPLLSVRTSTIKNHEFIDEQMFEQNCMESSMQNYPSTRSPSLSSHPGLTTTC 546
>AL049557-2|CAI22711.1| 655|Homo sapiens potassium voltage-gated
channel, Shal-related subfamily, member 3 protein.
Length = 655
Score = 34.3 bits (75), Expect = 0.38
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = +3
Query: 411 MITKPLVEYATSEVCHEECVIRRLSTKNCKNSSLSKYPCLEQPNIISGISAGVVC 575
++ PL+ TS + + E + ++ +NC SS+ YP P++ S C
Sbjct: 492 LVDDPLLSVRTSTIKNHEFIDEQMFEQNCMESSMQNYPSTRSPSLSSHPGLTTTC 546
>AF205857-1|AAF20925.1| 655|Homo sapiens potassium ionic channel
Kv4.3 long isoform protein.
Length = 655
Score = 34.3 bits (75), Expect = 0.38
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = +3
Query: 411 MITKPLVEYATSEVCHEECVIRRLSTKNCKNSSLSKYPCLEQPNIISGISAGVVC 575
++ PL+ TS + + E + ++ +NC SS+ YP P++ S C
Sbjct: 492 LVDDPLLSVRTSTIKNHEFIDEQMFEQNCMESSMQNYPSTRSPSLSSHPGLTTTC 546
>AF166011-1|AAF68177.1| 655|Homo sapiens voltage-gated potassium
channel Kv4.3 long variant protein.
Length = 655
Score = 34.3 bits (75), Expect = 0.38
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = +3
Query: 411 MITKPLVEYATSEVCHEECVIRRLSTKNCKNSSLSKYPCLEQPNIISGISAGVVC 575
++ PL+ TS + + E + ++ +NC SS+ YP P++ S C
Sbjct: 492 LVDDPLLSVRTSTIKNHEFIDEQMFEQNCMESSMQNYPSTRSPSLSSHPGLTTTC 546
>AF120491-1|AAD38898.1| 655|Homo sapiens Sha1-related potassium
channel Kv4.3 protein.
Length = 655
Score = 34.3 bits (75), Expect = 0.38
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = +3
Query: 411 MITKPLVEYATSEVCHEECVIRRLSTKNCKNSSLSKYPCLEQPNIISGISAGVVC 575
++ PL+ TS + + E + ++ +NC SS+ YP P++ S C
Sbjct: 492 LVDDPLLSVRTSTIKNHEFIDEQMFEQNCMESSMQNYPSTRSPSLSSHPGLTTTC 546
>AF048713-1|AAC05122.1| 655|Homo sapiens Kv4.3 potassium channel
long splice variant protein.
Length = 655
Score = 34.3 bits (75), Expect = 0.38
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = +3
Query: 411 MITKPLVEYATSEVCHEECVIRRLSTKNCKNSSLSKYPCLEQPNIISGISAGVVC 575
++ PL+ TS + + E + ++ +NC SS+ YP P++ S C
Sbjct: 492 LVDDPLLSVRTSTIKNHEFIDEQMFEQNCMESSMQNYPSTRSPSLSSHPGLTTTC 546
>AF187963-1|AAF01044.1| 655|Homo sapiens voltage gated potassium
channel Kv4.3 long splice variant protein.
Length = 655
Score = 33.9 bits (74), Expect = 0.51
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = +3
Query: 411 MITKPLVEYATSEVCHEECVIRRLSTKNCKNSSLSKYPCLEQPNIISGISAGVVC 575
++ PL+ TS + + E + ++ +NC SS+ YP P++ S C
Sbjct: 492 LVDDPLLSVRTSTIKNHEFIDEQMFEQNCMESSMQNYPSQRSPSLSSHPGLTTTC 546
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,815,002
Number of Sequences: 237096
Number of extensions: 1732245
Number of successful extensions: 7227
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 7150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7227
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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