Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_F11
(651 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY094711-1|AAM11064.1| 235|Drosophila melanogaster GH13924p pro... 63 3e-10
AE014297-359|AAF51950.1| 235|Drosophila melanogaster CG2046-PA ... 63 3e-10
AY061209-1|AAL28757.1| 538|Drosophila melanogaster LD15705p pro... 32 0.59
AE014297-3719|AAZ52545.1| 538|Drosophila melanogaster CG33095-P... 32 0.59
AE014297-3718|AAF56400.2| 538|Drosophila melanogaster CG33095-P... 32 0.59
BT001868-1|AAN71638.1| 538|Drosophila melanogaster SD03344p pro... 31 1.8
AY051573-1|AAK92997.1| 337|Drosophila melanogaster GH21948p pro... 29 4.1
AE014134-2637|AAF53483.1| 337|Drosophila melanogaster CG3793-PA... 29 4.1
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 29 7.2
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 29 7.2
AE014297-4165|AAN14124.1| 424|Drosophila melanogaster CG31055-P... 29 7.2
AE014297-4164|AAN14123.1| 436|Drosophila melanogaster CG31055-P... 29 7.2
AE014297-4163|AAN14122.1| 415|Drosophila melanogaster CG31055-P... 29 7.2
>AY094711-1|AAM11064.1| 235|Drosophila melanogaster GH13924p
protein.
Length = 235
Score = 63.3 bits (147), Expect = 3e-10
Identities = 48/195 (24%), Positives = 91/195 (46%), Gaps = 7/195 (3%)
Frame = +3
Query: 63 FGEIIEPSSRTTWEDWDEN---NSSTDTQTNLQFQKHIE---IPNDIEIFILLEGKYLAH 224
FGE+ PSSR W+D DE+ N + L+F + P + E+ +++EG + H
Sbjct: 6 FGELNIPSSRAFWDDCDEDELENLKPVEKLQLKFDDDCDGEAAPVESEMLVVIEGVNVTH 65
Query: 225 SIKQNV-CNLELINSVPEISLKIYKMHSLESYVXXXXXXXXXXXXXXXHLLEKYITNSKK 401
+ + + + ++P + ++ HS + + LL Y+ +KK
Sbjct: 66 FASSLLEKDAKRVCAIPANNSTLHWSHSSKQLLAIINEDLTSSGEVA-ELLLPYVKLAKK 124
Query: 402 VISMITKPLVEYATSEVCHEECVIRRLSTKNCKNSSLSKYPCLEQPNIISGISAGVVCLR 581
VI++ KP VE+ + ++ I + +++ LE PN I+G++AGV R
Sbjct: 125 VITLTLKPKVEFKSEDIQLYRDHIAVVRGIGANQKDITE---LEAPNFIAGVAAGVASWR 181
Query: 582 EHLDLSALALVFYTE 626
+ ++L + V YT+
Sbjct: 182 DQMELPVTSFVIYTD 196
>AE014297-359|AAF51950.1| 235|Drosophila melanogaster CG2046-PA
protein.
Length = 235
Score = 63.3 bits (147), Expect = 3e-10
Identities = 48/195 (24%), Positives = 91/195 (46%), Gaps = 7/195 (3%)
Frame = +3
Query: 63 FGEIIEPSSRTTWEDWDEN---NSSTDTQTNLQFQKHIE---IPNDIEIFILLEGKYLAH 224
FGE+ PSSR W+D DE+ N + L+F + P + E+ +++EG + H
Sbjct: 6 FGELNIPSSRAFWDDCDEDELENLKPVEKLQLKFDDDCDGEAAPVESEMLVVIEGVNVTH 65
Query: 225 SIKQNV-CNLELINSVPEISLKIYKMHSLESYVXXXXXXXXXXXXXXXHLLEKYITNSKK 401
+ + + + ++P + ++ HS + + LL Y+ +KK
Sbjct: 66 FASSLLEKDAKRVCAIPANNSTLHWSHSSKQLLAIINEDLTSSGEVA-ELLLPYVKLAKK 124
Query: 402 VISMITKPLVEYATSEVCHEECVIRRLSTKNCKNSSLSKYPCLEQPNIISGISAGVVCLR 581
VI++ KP VE+ + ++ I + +++ LE PN I+G++AGV R
Sbjct: 125 VITLTLKPKVEFKSEDIQLYRDHIAVVRGIGANQKDITE---LEAPNFIAGVAAGVASWR 181
Query: 582 EHLDLSALALVFYTE 626
+ ++L + V YT+
Sbjct: 182 DQMELPVTSFVIYTD 196
>AY061209-1|AAL28757.1| 538|Drosophila melanogaster LD15705p
protein.
Length = 538
Score = 32.3 bits (70), Expect = 0.59
Identities = 18/74 (24%), Positives = 36/74 (48%)
Frame = +3
Query: 93 TTWEDWDENNSSTDTQTNLQFQKHIEIPNDIEIFILLEGKYLAHSIKQNVCNLELINSVP 272
T+ + W + S D + N+Q + +P+ ++ ++ S++QN NL N
Sbjct: 351 TSHKIWSLDQPSNDLKANIQSKSASFLPDKVKEISSPLPNHVRKSVQQNNSNLLCPNVQA 410
Query: 273 EISLKIYKMHSLES 314
+ L++ K+HS S
Sbjct: 411 RLLLQVEKLHSRHS 424
>AE014297-3719|AAZ52545.1| 538|Drosophila melanogaster CG33095-PB,
isoform B protein.
Length = 538
Score = 32.3 bits (70), Expect = 0.59
Identities = 18/74 (24%), Positives = 36/74 (48%)
Frame = +3
Query: 93 TTWEDWDENNSSTDTQTNLQFQKHIEIPNDIEIFILLEGKYLAHSIKQNVCNLELINSVP 272
T+ + W + S D + N+Q + +P+ ++ ++ S++QN NL N
Sbjct: 351 TSHKIWSLDQPSNDLKANIQSKSASFLPDKVKEISSPLPNHVRKSVQQNNSNLLCPNVQA 410
Query: 273 EISLKIYKMHSLES 314
+ L++ K+HS S
Sbjct: 411 RLLLQVEKLHSRHS 424
>AE014297-3718|AAF56400.2| 538|Drosophila melanogaster CG33095-PA,
isoform A protein.
Length = 538
Score = 32.3 bits (70), Expect = 0.59
Identities = 18/74 (24%), Positives = 36/74 (48%)
Frame = +3
Query: 93 TTWEDWDENNSSTDTQTNLQFQKHIEIPNDIEIFILLEGKYLAHSIKQNVCNLELINSVP 272
T+ + W + S D + N+Q + +P+ ++ ++ S++QN NL N
Sbjct: 351 TSHKIWSLDQPSNDLKANIQSKSASFLPDKVKEISSPLPNHVRKSVQQNNSNLLCPNVQA 410
Query: 273 EISLKIYKMHSLES 314
+ L++ K+HS S
Sbjct: 411 RLLLQVEKLHSRHS 424
>BT001868-1|AAN71638.1| 538|Drosophila melanogaster SD03344p
protein.
Length = 538
Score = 30.7 bits (66), Expect = 1.8
Identities = 18/74 (24%), Positives = 35/74 (47%)
Frame = +3
Query: 93 TTWEDWDENNSSTDTQTNLQFQKHIEIPNDIEIFILLEGKYLAHSIKQNVCNLELINSVP 272
T+ + W + S D + N+Q + +P+ ++ ++ S++QN NL N
Sbjct: 351 TSHKIWSLDQPSNDLKANIQSKSASFLPDKVKEISSPLPNHVRKSVQQNNSNLLCPNVQA 410
Query: 273 EISLKIYKMHSLES 314
L++ K+HS S
Sbjct: 411 RSLLQVEKLHSRHS 424
>AY051573-1|AAK92997.1| 337|Drosophila melanogaster GH21948p
protein.
Length = 337
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +3
Query: 366 HLLEKYITNSKKVISMITKPLVEYATSEVCHEECVIRRLSTKNCKN 503
HL+ + N +V S + + V+Y+ + ECV+ + +NC+N
Sbjct: 160 HLMGVDLRNLDEVDSKLQQAEVDYSLPTIFLAECVLVYIEAQNCRN 205
>AE014134-2637|AAF53483.1| 337|Drosophila melanogaster CG3793-PA
protein.
Length = 337
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +3
Query: 366 HLLEKYITNSKKVISMITKPLVEYATSEVCHEECVIRRLSTKNCKN 503
HL+ + N +V S + + V+Y+ + ECV+ + +NC+N
Sbjct: 160 HLMGVDLRNLDEVDSKLQQAEVDYSLPTIFLAECVLVYIEAQNCRN 205
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 28.7 bits (61), Expect = 7.2
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -3
Query: 73 ISPKLFIFPTITNPLLFYG 17
IS K+ IF TI NP+L YG
Sbjct: 813 ISNKIIIFKTIFNPILMYG 831
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 28.7 bits (61), Expect = 7.2
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -3
Query: 73 ISPKLFIFPTITNPLLFYG 17
IS K+ IF TI NP+L YG
Sbjct: 761 ISNKIIIFKTIFNPILMYG 779
>AE014297-4165|AAN14124.1| 424|Drosophila melanogaster CG31055-PB,
isoform B protein.
Length = 424
Score = 28.7 bits (61), Expect = 7.2
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Frame = +3
Query: 426 LVEYATSEVCHEECVIRRLSTKN--CKNSSLSKYPCLEQPNIISGISAGVVCLREHLDLS 599
++E ATS+ H++C+ ++ T + C NS+ S+ P +Q + I+ G HLD S
Sbjct: 99 VMESATSQTPHQDCLSSQVDTADLICTNSAESQTPDPDQQ--FTTIAVGTTV---HLDSS 153
Query: 600 A 602
A
Sbjct: 154 A 154
>AE014297-4164|AAN14123.1| 436|Drosophila melanogaster CG31055-PC,
isoform C protein.
Length = 436
Score = 28.7 bits (61), Expect = 7.2
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Frame = +3
Query: 426 LVEYATSEVCHEECVIRRLSTKN--CKNSSLSKYPCLEQPNIISGISAGVVCLREHLDLS 599
++E ATS+ H++C+ ++ T + C NS+ S+ P +Q + I+ G HLD S
Sbjct: 111 VMESATSQTPHQDCLSSQVDTADLICTNSAESQTPDPDQQ--FTTIAVGTTV---HLDSS 165
Query: 600 A 602
A
Sbjct: 166 A 166
>AE014297-4163|AAN14122.1| 415|Drosophila melanogaster CG31055-PA,
isoform A protein.
Length = 415
Score = 28.7 bits (61), Expect = 7.2
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Frame = +3
Query: 426 LVEYATSEVCHEECVIRRLSTKN--CKNSSLSKYPCLEQPNIISGISAGVVCLREHLDLS 599
++E ATS+ H++C+ ++ T + C NS+ S+ P +Q + I+ G HLD S
Sbjct: 90 VMESATSQTPHQDCLSSQVDTADLICTNSAESQTPDPDQQ--FTTIAVGTTV---HLDSS 144
Query: 600 A 602
A
Sbjct: 145 A 145
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,604,899
Number of Sequences: 53049
Number of extensions: 541403
Number of successful extensions: 1223
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1219
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -