Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_F09
         (556 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_03_0156 + 14939355-14939435,14939559-14939624,14940331-149404...    50   9e-07
01_06_0642 + 30811708-30811768,30812256-30812305,30812455-308129...    28   5.8  
03_02_0938 - 12563250-12563681,12564098-12564514,12565333-125654...    27   7.6  

>03_03_0156 +
           14939355-14939435,14939559-14939624,14940331-14940414,
           14940796-14940875,14941313-14941358,14941456-14941566,
           14942224-14942290,14942615-14942630,14942871-14942931,
           14943015-14943145,14943243-14943360,14944053-14944176,
           14944517-14944618,14944717-14944785,14946250-14946329
          Length = 411

 Score = 50.4 bits (115), Expect = 9e-07
 Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
 Frame = +2

Query: 371 CHYRHVLLRVSYLGWEYQXLAVQENTTQTVEYHLFEXLXRA-CLIQSRETSNHHRCGRTD 547
           C  R + L++ Y G  +   A + +T  TVE  +F+ L RA  L+ SR+ S + RCGRTD
Sbjct: 89  CPKRLIALKIMYFGQRFYGFASEAHTEPTVESEIFKALERAKLLVGSRKESCYSRCGRTD 148

Query: 548 QG 553
           +G
Sbjct: 149 KG 150


>01_06_0642 +
           30811708-30811768,30812256-30812305,30812455-30812926,
           30813237-30813596,30813694-30814101,30814383-30814453,
           30814553-30814629,30814741-30814888,30815878-30816039,
           30816119-30816304
          Length = 664

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
 Frame = +2

Query: 305 KLHLADGQKQKKVDQREFMFEKCHYRHVLLRVSYLGWEYQXLAVQENT-TQTVEYHL 472
           KL + +GQ +++         + H+RH++  V Y   + Q + V +     T+ YHL
Sbjct: 393 KLKIGNGQGEREFKAEVDTISRVHHRHLVSLVGYCIADGQRMLVYDFVPNNTLYYHL 449


>03_02_0938 -
           12563250-12563681,12564098-12564514,12565333-12565477,
           12565574-12565722,12565836-12565948,12566423-12566458,
           12566558-12566816
          Length = 516

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
 Frame = +2

Query: 362 FEKCHYRHVLLRVSYLGWEYQXLAVQE--NTTQTVEYHLFEXLXRA-CLIQSR----ETS 520
           +E    + V+LRV Y+G EY+ L  Q   +   T+E  L   + +A  +++S     +  
Sbjct: 66  WESARKKRVVLRVGYVGTEYRGLQKQRELSADSTIESVLETAIFKAGGILESNYGKLQKV 125

Query: 521 NHHRCGRTDQG 553
              R  RTD+G
Sbjct: 126 GWERSSRTDKG 136


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,492,389
Number of Sequences: 37544
Number of extensions: 289683
Number of successful extensions: 618
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 617
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1257681096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)