Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_F09
         (556 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z47075-5|CAA87378.1|  402|Caenorhabditis elegans Hypothetical pr...    54   5e-08
Z68315-4|CAA92675.2|  745|Caenorhabditis elegans Hypothetical pr...    28   3.9  
Z82260-2|CAB05130.1|  344|Caenorhabditis elegans Hypothetical pr...    28   5.2  
Z49125-7|CAN99660.1|  717|Caenorhabditis elegans Hypothetical pr...    28   5.2  
Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical pr...    27   9.1  
Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical p...    27   9.1  

>Z47075-5|CAA87378.1|  402|Caenorhabditis elegans Hypothetical
           protein E02H1.3 protein.
          Length = 402

 Score = 54.4 bits (125), Expect = 5e-08
 Identities = 27/75 (36%), Positives = 40/75 (53%)
 Frame = +2

Query: 329 KQKKVDQREFMFEKCHYRHVLLRVSYLGWEYQXLAVQENTTQTVEYHLFEXLXRACLIQS 508
           K KK    +F+      R + ++  YLGWE+  L  Q +T  TVE H+ + L +  LI+ 
Sbjct: 15  KSKKAKTLDFLAHP--RRKIAIQFFYLGWEHDGLVQQPHTQNTVENHIMQALIKTHLIED 72

Query: 509 RETSNHHRCGRTDQG 553
               +  RCGRTD+G
Sbjct: 73  WTKCDFSRCGRTDKG 87


>Z68315-4|CAA92675.2|  745|Caenorhabditis elegans Hypothetical
           protein F28C6.4a protein.
          Length = 745

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
 Frame = -2

Query: 291 FQLCIMGLQL--YYFLDEIIFVQL*KFLSCCVPVNLLFWWQFFHILTSLILL--FQVHV 127
           +Q  ++GLQL  Y F   I+F+      SC   +N LF ++   + TSLI L  FQ H+
Sbjct: 661 YQPILVGLQLMLYTFSGPILFLCGCNASSCTSLLNHLFSYRISSMCTSLICLYIFQNHL 719


>Z82260-2|CAB05130.1|  344|Caenorhabditis elegans Hypothetical
           protein C32H11.3 protein.
          Length = 344

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 18/58 (31%), Positives = 24/58 (41%)
 Frame = -3

Query: 533 IGDD*RFLGFVSDRPXSRXQKDDILLFVLYSPVQPDXGIPSQGTIPLGGHDDNGIFQT 360
           IG     L    DR  +    D + L V  SPV P      + T+   G D NG ++T
Sbjct: 143 IGMQPHVLNITKDRFAAEFNSDAVSLLV--SPVDPKNYYSLRSTLVFEGQDFNGFYRT 198


>Z49125-7|CAN99660.1|  717|Caenorhabditis elegans Hypothetical
           protein C47G2.5b protein.
          Length = 717

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
 Frame = +1

Query: 241 DLVEKIIQLQAHNTQLKNIINKTTPCRWP-KAEKSRPKRIYV*KMPLSSCPPKGIVPWL- 414
           D   K+   +A+++    I  +T+P +WP +AEK+  K      +  +  PPK    W  
Sbjct: 589 DEFRKLCSERANSSSCAGISFETSPIKWPGEAEKTSEKASEPPSVVANMAPPKEDDMWAD 648

Query: 415 --GIPXSGCTGEYNTNSRISS 471
               P    T   N+ S  SS
Sbjct: 649 FSSFPTISPTAAANSASSSSS 669


>Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical
           protein C47A10.1 protein.
          Length = 1294

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = -2

Query: 321 SARCSFIYDVFQLCIMGLQLYYFLDEIIFVQL*KFLSCCVPVNLLFWWQFFH 166
           +AR  F ++V Q C+  + L   +    F+Q   F+  C  ++  F  QFFH
Sbjct: 93  AARAEFSHEVIQNCLKYVYLGCGIFAAGFLQASCFMVICEKLSNRFRRQFFH 144


>Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical
           protein C47A10.1 protein.
          Length = 1294

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = -2

Query: 321 SARCSFIYDVFQLCIMGLQLYYFLDEIIFVQL*KFLSCCVPVNLLFWWQFFH 166
           +AR  F ++V Q C+  + L   +    F+Q   F+  C  ++  F  QFFH
Sbjct: 93  AARAEFSHEVIQNCLKYVYLGCGIFAAGFLQASCFMVICEKLSNRFRRQFFH 144


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,089,721
Number of Sequences: 27780
Number of extensions: 284396
Number of successful extensions: 744
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 744
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)