Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_F07
(502 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0683 + 10363963-10364037,10364112-10364185,10364312-103644... 147 5e-36
05_03_0610 - 16167557-16167679,16168236-16168418,16169291-161694... 128 2e-30
02_02_0695 - 13024639-13024800,13025425-13025607,13025635-13025679 72 3e-13
12_01_0191 + 1413287-1413346,1413504-1413632,1416819-1416998,141... 29 2.1
04_04_1644 + 35015849-35016838 29 2.1
02_03_0395 - 18554596-18555090,18555194-18555566,18556026-18556168 29 2.1
06_02_0105 - 11893666-11895483,11895661-11896422 29 2.8
03_02_0488 - 8824980-8825267,8825364-8827775 28 3.7
06_03_0407 + 20476147-20476187,20476784-20477036 28 4.8
01_01_0823 - 6407635-6407731,6407786-6407857,6409766-6409872 28 4.8
05_05_0120 + 22520285-22520569 27 8.5
02_02_0157 - 7280335-7280541,7280656-7280762,7280918-7281097,728... 27 8.5
>03_02_0683 +
10363963-10364037,10364112-10364185,10364312-10364435,
10365047-10365229,10365478-10365600
Length = 192
Score = 147 bits (356), Expect = 5e-36
Identities = 78/157 (49%), Positives = 109/157 (69%), Gaps = 2/157 (1%)
Frame = +2
Query: 38 TMSTKIIKASGAEADSFETSISQALVELET-NSDLKAQLRELXITKAKEXELH-NKKSII 211
T KI K G E FE S++QA +LE N +LK++L++L I A + ++ N+K+++
Sbjct: 3 TARKKIQKEKGLEPSEFEDSVAQAFFDLENGNQELKSELKDLYINNAVQMDIAGNRKAVV 62
Query: 212 IYVPMPKLKAFXKIQIRLVRELEKKFSGKHVXFVGDRKILPKPSHKTRVANKQKRPRSRT 391
I+VP KAF KI +RLVRELEKKFSGK V V R+I+ P + V +RPR+RT
Sbjct: 63 IHVPYRLRKAFKKIHVRLVRELEKKFSGKDVVIVATRRIVRPPKKGSAV----QRPRTRT 118
Query: 392 LTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIXVHL 502
LT+V+D ILED+V+PAEIVGKRIR +LDG+++I + L
Sbjct: 119 LTAVHDGILEDVVYPAEIVGKRIRYRLDGAKVIKIFL 155
>05_03_0610 -
16167557-16167679,16168236-16168418,16169291-16169414,
16169514-16169626,16169668-16169742
Length = 205
Score = 128 bits (309), Expect = 2e-30
Identities = 69/135 (51%), Positives = 94/135 (69%), Gaps = 2/135 (1%)
Frame = +2
Query: 104 QALVELET-NSDLKAQLRELXITKAKEXELH-NKKSIIIYVPMPKLKAFXKIQIRLVREL 277
QA +LE N +LK+ L++L I A + +L N+K++IIYVP KA+ KI +RLVREL
Sbjct: 38 QAFFDLENGNQELKSDLKDLYINGAVQMDLPGNRKAVIIYVPYRLRKAYKKIHVRLVREL 97
Query: 278 EKKFSGKHVXFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKR 457
EKKFSGK V V R+I+ P + V RPR+RTLT+V+D ILED+V+PAEIVGKR
Sbjct: 98 EKKFSGKDVVLVATRRIVRPPKKGSAVV----RPRTRTLTAVHDGILEDVVYPAEIVGKR 153
Query: 458 IRVKLDGSQLIXVHL 502
+R LDG +++ + L
Sbjct: 154 VRYHLDGRKIMKIFL 168
>02_02_0695 - 13024639-13024800,13025425-13025607,13025635-13025679
Length = 129
Score = 71.7 bits (168), Expect = 3e-13
Identities = 40/86 (46%), Positives = 56/86 (65%)
Frame = +2
Query: 194 NKKSIIIYVPMPKLKAFXKIQIRLVRELEKKFSGKHVXFVGDRKILPKPSHKTRVANKQK 373
N K ++I+V KAF KI +RLV+ELEKKFSGK V F R+I+ +P +K +
Sbjct: 42 NWKVVVIHVLYHLCKAFKKIHVRLVKELEKKFSGKDVVFDATRRIV-RPLNKGSAVH--- 97
Query: 374 RPRSRTLTSVYDAILEDLVFPAEIVG 451
PR+RTL +V+D ILED+V ++G
Sbjct: 98 HPRTRTLITVHDGILEDVVSQLRLLG 123
>12_01_0191 +
1413287-1413346,1413504-1413632,1416819-1416998,
1417747-1417938,1418533-1418673,1418785-1418912,
1419088-1419262,1419664-1419852,1420628-1420749,
1420829-1420874
Length = 453
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +2
Query: 377 PRSRTLTSVYDAILEDLVFPAEIVGKRI 460
P +RTLT+ +D IL+D + A+I GK +
Sbjct: 86 PNTRTLTNAHDGILDD-INCAQIAGKHV 112
>04_04_1644 + 35015849-35016838
Length = 329
Score = 29.1 bits (62), Expect = 2.1
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1
Query: 154 PKLGFEVGVGFEFDQRLRDRGLEGIRLSTARFDDLRTHR 38
P L FE+ + +FDQR+ E ++L DL HR
Sbjct: 134 PALAFEINLS-DFDQRVHRHAAESVQLLAEHGVDLAAHR 171
>02_03_0395 - 18554596-18555090,18555194-18555566,18556026-18556168
Length = 336
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = -2
Query: 372 FCLLATRVLWLGLGRILRSPTKXTCLPLNFFSSSRTSLI 256
F L A+ L L L +L T CLPL FF+ + SL+
Sbjct: 4 FSLFASLSLSLSLSFVLADITDNPCLPLIFFAGNLISLM 42
>06_02_0105 - 11893666-11895483,11895661-11896422
Length = 859
Score = 28.7 bits (61), Expect = 2.8
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +2
Query: 26 VKLSTMSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELXITKAKEXELHN 196
V +++ T++IK A A + + ++ +++ LREL +AKE E N
Sbjct: 536 VAAASLKTELIKEKTALATMKQMEATSSIAAASLRVEIQLALRELEAVQAKEKESRN 592
>03_02_0488 - 8824980-8825267,8825364-8827775
Length = 899
Score = 28.3 bits (60), Expect = 3.7
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +2
Query: 59 KASGAEADSFETSISQALVELETNSDL 139
++SG + FET +S A++E+E N+ L
Sbjct: 305 QSSGVTGEVFETLVSSAVMEMERNASL 331
>06_03_0407 + 20476147-20476187,20476784-20477036
Length = 97
Score = 27.9 bits (59), Expect = 4.8
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -1
Query: 133 GVGFEFDQRLRDRGLEGIRLSTARFDDLRTHR*QLYGRERDPT 5
G G E D+ + RG+EG+ + R LR R ++ G E T
Sbjct: 19 GHGLECDKVWQQRGIEGVTAAGDRRRYLRVRREEITGEETHAT 61
>01_01_0823 - 6407635-6407731,6407786-6407857,6409766-6409872
Length = 91
Score = 27.9 bits (59), Expect = 4.8
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 107 ALVELETNSDLKAQLRELXITKAKEXELHNKKSIIIY 217
A++E+E N DL + L T+ E H + S++IY
Sbjct: 2 AILEIEDNDDLLSLPGSLANTRIGESPSHQRDSLLIY 38
>05_05_0120 + 22520285-22520569
Length = 94
Score = 27.1 bits (57), Expect = 8.5
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = -3
Query: 440 QQGRPSPRG*HRTQRSMSLSVAS 372
QQ RPSP HR R+MS++VAS
Sbjct: 56 QQARPSPAARHR--RAMSVAVAS 76
>02_02_0157 -
7280335-7280541,7280656-7280762,7280918-7281097,
7281182-7281277,7281378-7281459,7281553-7283037,
7283376-7283450,7283521-7283598,7283708-7283791,
7283885-7283965,7284073-7284291,7284398-7284648,
7284748-7284796
Length = 997
Score = 27.1 bits (57), Expect = 8.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 153 GSXTLQKLKKXNYTIRSRSSSMCRCL 230
G+ T+ KLKK + T+RS CR L
Sbjct: 645 GNNTILKLKKESETLRSSYEESCRLL 670
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,019,869
Number of Sequences: 37544
Number of extensions: 220176
Number of successful extensions: 609
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 605
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1059318940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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