Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_F07
         (502 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75714-1|CAB00058.1|  194|Caenorhabditis elegans Hypothetical pr...   179   9e-46
U41263-5|AAC24427.1|  400|Caenorhabditis elegans Hypothetical pr...    29   2.5  
AL034488-17|CAA22459.2|  316|Caenorhabditis elegans Hypothetical...    28   3.3  
AL034488-16|CAN99708.1|  317|Caenorhabditis elegans Hypothetical...    28   3.3  
Z78063-2|CAB01503.2|  275|Caenorhabditis elegans Hypothetical pr...    28   4.4  
Z78420-2|CAB01710.3|  738|Caenorhabditis elegans Hypothetical pr...    27   5.8  

>Z75714-1|CAB00058.1|  194|Caenorhabditis elegans Hypothetical
           protein ZC434.2 protein.
          Length = 194

 Score =  179 bits (436), Expect = 9e-46
 Identities = 86/152 (56%), Positives = 114/152 (75%), Gaps = 1/152 (0%)
 Frame = +2

Query: 50  KIIKASGAEADSFETSISQALVELETNSDLKAQLRELXITKAKEXELHNKKSIIIYVPMP 229
           K++K+ G      E  +SQAL++LETN D+++QL+EL I   KE EL NK +IIIYVP+P
Sbjct: 7   KLLKSDGKVVSEIEKQVSQALIDLETNDDVQSQLKELYIVGVKEVELGNKSAIIIYVPVP 66

Query: 230 KLKAFXKIQIRLVRELEKKFSGKHVXFVGDRKILPKPSHKTRV-ANKQKRPRSRTLTSVY 406
           +LKAF KI   LVRELEKKF G+ +  +  R+ILPKP   ++    KQKRPRSRTLT+V+
Sbjct: 67  QLKAFHKIHPALVRELEKKFGGRDILILAKRRILPKPQRGSKARPQKQKRPRSRTLTAVH 126

Query: 407 DAILEDLVFPAEIVGKRIRVKLDGSQLIXVHL 502
           DA L++LV+PAE+VG+RIRVKLDG ++  VHL
Sbjct: 127 DAWLDELVYPAEVVGRRIRVKLDGKKVYKVHL 158


>U41263-5|AAC24427.1|  400|Caenorhabditis elegans Hypothetical
           protein T19D12.7 protein.
          Length = 400

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -1

Query: 337 LRQDLTVSNKXYMFTTELLFELTDKPDLDLXKGLQFRHRHIDD 209
           L+QD     K +MF    +F   DK  +D  + L+F+  + DD
Sbjct: 167 LQQDFRSFQKVWMFNKTEMFSADDKTFIDSNRSLEFQVLNEDD 209


>AL034488-17|CAA22459.2|  316|Caenorhabditis elegans Hypothetical
           protein Y54G11A.10b protein.
          Length = 316

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 14/58 (24%), Positives = 26/58 (44%)
 Frame = +2

Query: 179 EXELHNKKSIIIYVPMPKLKAFXKIQIRLVRELEKKFSGKHVXFVGDRKILPKPSHKT 352
           E E H K   ++   +  +K   +   +L+ E+E++F  + +        LP PS  T
Sbjct: 255 EAECHEKAVDLLKSAVGSVKLVIRYMPKLLDEMERRFERQRIRSTQQSPTLPTPSSST 312


>AL034488-16|CAN99708.1|  317|Caenorhabditis elegans Hypothetical
           protein Y54G11A.10a protein.
          Length = 317

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 14/58 (24%), Positives = 26/58 (44%)
 Frame = +2

Query: 179 EXELHNKKSIIIYVPMPKLKAFXKIQIRLVRELEKKFSGKHVXFVGDRKILPKPSHKT 352
           E E H K   ++   +  +K   +   +L+ E+E++F  + +        LP PS  T
Sbjct: 256 EAECHEKAVDLLKSAVGSVKLVIRYMPKLLDEMERRFERQRIRSTQQSPTLPTPSSST 313


>Z78063-2|CAB01503.2|  275|Caenorhabditis elegans Hypothetical
           protein F45D3.2 protein.
          Length = 275

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 17/74 (22%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
 Frame = +2

Query: 20  PPVKLSTMSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELXITKAKEXELHNK 199
           P + ++T +      S   + S  TS+ + LVE +       ++R + +TK +E  +  K
Sbjct: 158 PSLPITTSTITCSSNSSPSSSSITTSVLRTLVEDDDADVHPNKVRPIQVTKEEEDLVRRK 217

Query: 200 -KSIIIYVPMPKLK 238
            + ++  +P+ KL+
Sbjct: 218 TQELLKSMPLQKLE 231


>Z78420-2|CAB01710.3|  738|Caenorhabditis elegans Hypothetical
           protein F45H11.3 protein.
          Length = 738

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = -1

Query: 136 VGVGFEFDQRLRDRGLEGIRLSTARFDDL 50
           V VGFE   RLRD+GL   +LS   +D L
Sbjct: 522 VEVGFENWIRLRDKGLSHSQLSCQLYDTL 550


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,942,193
Number of Sequences: 27780
Number of extensions: 179695
Number of successful extensions: 556
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 555
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)