Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_F03
(647 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1198.08 |||dipeptidase Dug1 |Schizosaccharomyces pombe|chr 2... 145 4e-36
SPAC24C9.08 |||vacuolar carboxypeptidase |Schizosaccharomyces po... 31 0.14
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 30 0.33
SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch... 26 4.1
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 26 4.1
SPBC19C7.08c |||leucine carboxyl methyltransferase|Schizosacchar... 26 4.1
SPAC25H1.09 |mde5|meu30, SPAC4A8.01|alpha-amylase homolog Mde5|S... 26 4.1
SPAC17H9.01 |cid16||poly|Schizosaccharomyces pombe|chr 1|||Manual 25 9.4
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 25 9.4
SPBC609.02 |ptn1||phosphatidylinositol-3,4,5-trisphosphate3-phos... 25 9.4
SPBC3B9.10 |vti1||SNARE Vti1|Schizosaccharomyces pombe|chr 2|||M... 25 9.4
>SPBC1198.08 |||dipeptidase Dug1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 474
Score = 145 bits (352), Expect = 4e-36
Identities = 67/160 (41%), Positives = 95/160 (59%), Gaps = 1/160 (0%)
Frame = +2
Query: 116 TLPEIFKYVDQNKDSYKQLLKEAVAIPSVSCDVKYRADCIRMVHWMQDKLKEVGATTELR 295
+L ++++ +D+ KD + L AV+IPSVS DV R + M ++ + ++GA E R
Sbjct: 2 SLDKLYEVIDKKKDEFVTRLSRAVSIPSVSADVTLRPKVVEMADFVVSEFTKLGAKMEKR 61
Query: 296 DVGFQTIDGKDVQXXXXXXXXXXNDPKKNTVCIYGHLDVQPALKSDGWETEPXEL-VERH 472
D+G+ +DG+DV NDP K TV IY H DVQPA DGW T+P L V+
Sbjct: 62 DIGYHQMDGQDVPLPPIVLGQYGNDPSKKTVLIYNHFDVQPASLEDGWSTDPFTLTVDNK 121
Query: 473 EKXYGRGSTDDKGPVLGWLHTINAYKGTGAXLPVNLKFIF 592
+ +GRG+TDDKGP++GW+ I A+K G PVNL F
Sbjct: 122 GRMFGRGATDDKGPLIGWISAIEAHKELGIDFPVNLLMCF 161
>SPAC24C9.08 |||vacuolar carboxypeptidase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 596
Score = 31.1 bits (67), Expect = 0.14
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +2
Query: 392 IYGHLDVQPALKS--DGWETEPXELVERHEKXYGRGSTDDKGPVLGWLHTI 538
+ GH DV P ++ D W P + Y RG+ DDK V+ L +
Sbjct: 194 LMGHQDVVPVNQASLDRWYFPPFSATYHNGHVYSRGAADDKNSVVAILEAL 244
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 29.9 bits (64), Expect = 0.33
Identities = 32/120 (26%), Positives = 50/120 (41%), Gaps = 3/120 (2%)
Frame = -3
Query: 528 SQPSTGPLSSVEPLPYXFSWRSTSSKGSVSHPSDFNAGCTSK*P*IQTVFFFGSLPNTPT 349
S T S +P S S++S S S A +S I + S ++PT
Sbjct: 227 SSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSI--ISSSSSSSSSPT 284
Query: 348 KTGGS*TSLPSIV*KPTSLNSVVAPTSFNLSCIQ*TI---RMQSARYFTSHETDGMATAS 178
T + +S S PTS +S ++ +S + S T+ M S+ F+S T +T S
Sbjct: 285 STSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTIS 344
>SPBC16D10.05 |mok13||alpha-1,3-glucan synthase
Mok13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2358
Score = 26.2 bits (55), Expect = 4.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 476 FHGAQLVXKVQSPIHQISMQVVHPNDHR 393
FH + + + IH+I +Q VH DH+
Sbjct: 796 FHWSGDLINIADGIHEIKLQRVHSQDHQ 823
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 26.2 bits (55), Expect = 4.1
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 631 LSSPXEPDSSIHSENELQIDRQXSTSALIGIDGMQPTK 518
+S EPDS + S NE+Q+ + + L + PTK
Sbjct: 214 VSQRSEPDSRLSSMNEMQLLASAAANQLDAAPRITPTK 251
>SPBC19C7.08c |||leucine carboxyl
methyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 681
Score = 26.2 bits (55), Expect = 4.1
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1
Query: 419 QVVHPNDHRYKLYFFLDHYPIR 354
++V P D + YFFL HY I+
Sbjct: 295 EMVEPFDEWEEFYFFLQHYSIQ 316
>SPAC25H1.09 |mde5|meu30, SPAC4A8.01|alpha-amylase homolog
Mde5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 513
Score = 26.2 bits (55), Expect = 4.1
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +1
Query: 7 LIKLPGNETACTIFSCLSSTLFSEFQTSFCKNGNGK 114
LIK+PG+ET + +C + E + K G K
Sbjct: 439 LIKMPGSETMIDLLTCTLIEVEGEVMRTSIKKGEPK 474
>SPAC17H9.01 |cid16||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1202
Score = 25.0 bits (52), Expect = 9.4
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = -1
Query: 434 HQISMQVVHPNDHRYKLYFFLDHYPIRLLKLAAVERLCHLLFESQHPL 291
H+I+M +V ++ F + R + L +E L +F+S HPL
Sbjct: 381 HEINMLLVDLLLEPLQVAFVYKNLARRWISLEEIENLWLKVFDSSHPL 428
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 25.0 bits (52), Expect = 9.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 445 SLPSIRFQCRLYIQMTIDTNCIFFW 371
SLPS+R C+LY ++I + F W
Sbjct: 4083 SLPSVRLACQLY-GVSIQSLVFFTW 4106
>SPBC609.02 |ptn1||phosphatidylinositol-3,4,
5-trisphosphate3-phosphatase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 348
Score = 25.0 bits (52), Expect = 9.4
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -1
Query: 383 YFFLDHYPIRLLKLAAVERLCHLLFESQHPLTL 285
Y F DH P LL L A+ LF++Q LTL
Sbjct: 93 YGFQDHNPPPLLFLWAIVMNMDALFQTQPLLTL 125
>SPBC3B9.10 |vti1||SNARE Vti1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 214
Score = 25.0 bits (52), Expect = 9.4
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 639 IISCQALXNQIPPYIRKMNFKLTG 568
I SCQ L N+I I +M ++TG
Sbjct: 31 IQSCQRLLNEIDEVIGQMEIEITG 54
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,790,761
Number of Sequences: 5004
Number of extensions: 57097
Number of successful extensions: 170
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 169
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 291768710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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