Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_F03
         (647 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118368-1|AAM48397.1|  478|Drosophila melanogaster RE11562p pro...   159   2e-39
AE013599-97|AAF57318.2|  478|Drosophila melanogaster CG17337-PA ...   159   2e-39
AY113542-1|AAM29547.1|  400|Drosophila melanogaster RE61589p pro...    35   0.083
AE014297-3271|AAF56096.1|  400|Drosophila melanogaster CG17109-P...    35   0.083
U51473-1|AAA96526.1|  711|Drosophila melanogaster A-band associa...    28   9.5  
AE013599-2148|AAM70939.1| 2403|Drosophila melanogaster CG18255-P...    28   9.5  
AE013599-2142|AAM70937.1| 4463|Drosophila melanogaster CG18255-P...    28   9.5  

>AY118368-1|AAM48397.1|  478|Drosophila melanogaster RE11562p
           protein.
          Length = 478

 Score =  159 bits (387), Expect = 2e-39
 Identities = 78/159 (49%), Positives = 98/159 (61%), Gaps = 1/159 (0%)
 Frame = +2

Query: 119 LPEIFKYVDQNKDSYKQLLKEAVAIPSVSCDVKYRADCIRMVHWMQDKLKEVGATTELRD 298
           L + F +VD  K+ Y   LK  V I SVS   + R +  RMV W  D+L+ +GA TEL D
Sbjct: 8   LQKFFAFVDGKKEDYIGALKTVVGIQSVSAWPEKRGEIGRMVEWTADRLRSLGAETELAD 67

Query: 299 VGFQTI-DGKDVQXXXXXXXXXXNDPKKNTVCIYGHLDVQPALKSDGWETEPXELVERHE 475
           VG QT+ +G+ +            DP K TV +YGHLDVQPALK DGW T P EL E   
Sbjct: 68  VGQQTLPNGQIIPLPKVLLGTLGKDPSKKTVLVYGHLDVQPALKEDGWNTNPFELTEVDG 127

Query: 476 KXYGRGSTDDKGPVLGWLHTINAYKGTGAXLPVNLKFIF 592
           K +GRG++DDKGPVL W+H I AY+     LPVN+KF+F
Sbjct: 128 KLFGRGASDDKGPVLCWIHAIEAYQKLNIALPVNVKFVF 166


>AE013599-97|AAF57318.2|  478|Drosophila melanogaster CG17337-PA
           protein.
          Length = 478

 Score =  159 bits (387), Expect = 2e-39
 Identities = 78/159 (49%), Positives = 98/159 (61%), Gaps = 1/159 (0%)
 Frame = +2

Query: 119 LPEIFKYVDQNKDSYKQLLKEAVAIPSVSCDVKYRADCIRMVHWMQDKLKEVGATTELRD 298
           L + F +VD  K+ Y   LK  V I SVS   + R +  RMV W  D+L+ +GA TEL D
Sbjct: 8   LQKFFAFVDGKKEDYIGALKTVVGIQSVSAWPEKRGEIGRMVEWTADRLRSLGAETELAD 67

Query: 299 VGFQTI-DGKDVQXXXXXXXXXXNDPKKNTVCIYGHLDVQPALKSDGWETEPXELVERHE 475
           VG QT+ +G+ +            DP K TV +YGHLDVQPALK DGW T P EL E   
Sbjct: 68  VGQQTLPNGQIIPLPKVLLGTLGKDPSKKTVLVYGHLDVQPALKEDGWNTNPFELTEVDG 127

Query: 476 KXYGRGSTDDKGPVLGWLHTINAYKGTGAXLPVNLKFIF 592
           K +GRG++DDKGPVL W+H I AY+     LPVN+KF+F
Sbjct: 128 KLFGRGASDDKGPVLCWIHAIEAYQKLNIALPVNVKFVF 166


>AY113542-1|AAM29547.1|  400|Drosophila melanogaster RE61589p
           protein.
          Length = 400

 Score = 35.1 bits (77), Expect = 0.083
 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = +2

Query: 368 DPKKNTVCIYGHLDVQPALKSDGWETEPXEL-VERHEKXYGRGSTDDKGPVLGWLHTINA 544
           +P+  +V +  H+DV P  + D W  +P    ++   + + RG+ D K    G+L  I  
Sbjct: 68  EPELPSVILNSHMDVVPVFR-DKWTHDPFAADIDEEGRIFARGTQDMKSVGTGYLGAIRL 126

Query: 545 YKGTG 559
            K +G
Sbjct: 127 LKASG 131


>AE014297-3271|AAF56096.1|  400|Drosophila melanogaster CG17109-PA
           protein.
          Length = 400

 Score = 35.1 bits (77), Expect = 0.083
 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = +2

Query: 368 DPKKNTVCIYGHLDVQPALKSDGWETEPXEL-VERHEKXYGRGSTDDKGPVLGWLHTINA 544
           +P+  +V +  H+DV P  + D W  +P    ++   + + RG+ D K    G+L  I  
Sbjct: 68  EPELPSVILNSHMDVVPVFR-DKWTHDPFAADIDEEGRIFARGTQDMKSVGTGYLGAIRL 126

Query: 545 YKGTG 559
            K +G
Sbjct: 127 LKASG 131


>U51473-1|AAA96526.1|  711|Drosophila melanogaster A-band associated
           protein protein.
          Length = 711

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = +2

Query: 374 KKNTVCIYGHLDVQPALKSDGWETEPXELVERHEKXYGRGSTDD 505
           ++ T   YG  D +     D  E EP E  ++ EK  G  S+DD
Sbjct: 129 EEGTEAGYGDEDQEQEYPEDEIEAEPEEDTKKKEKRRGSDSSDD 172


>AE013599-2148|AAM70939.1| 2403|Drosophila melanogaster CG18255-PE,
           isoform E protein.
          Length = 2403

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = +2

Query: 374 KKNTVCIYGHLDVQPALKSDGWETEPXELVERHEKXYGRGSTDD 505
           ++ T   YG  D +     D  E EP E  ++ EK  G  S+DD
Sbjct: 358 EEGTEAGYGDEDQEQEYPEDEIEAEPEEDTKKKEKRRGSDSSDD 401


>AE013599-2142|AAM70937.1| 4463|Drosophila melanogaster CG18255-PC,
           isoform C protein.
          Length = 4463

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = +2

Query: 374 KKNTVCIYGHLDVQPALKSDGWETEPXELVERHEKXYGRGSTDD 505
           ++ T   YG  D +     D  E EP E  ++ EK  G  S+DD
Sbjct: 358 EEGTEAGYGDEDQEQEYPEDEIEAEPEEDTKKKEKRRGSDSSDD 401


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,553,627
Number of Sequences: 53049
Number of extensions: 610064
Number of successful extensions: 1514
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1442
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1512
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)