Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_E22
(372 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0729 + 27612106-27612195,27612284-27612370,27612469-276125... 105 1e-23
06_03_1193 - 28298656-28298754,28299303-28299377,28299456-282995... 94 4e-20
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 90 4e-19
02_02_0253 - 8325437-8325628,8325705-8325779,8325933-8326037,832... 90 4e-19
06_03_0353 + 19810945-19810975,19811308-19811369,19811741-198118... 90 6e-19
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 88 2e-18
06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516... 85 1e-17
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 77 3e-15
03_06_0362 + 33379489-33379624,33380161-33380423,33380524-333806... 74 4e-14
10_08_0620 - 19321612-19323237 68 2e-12
05_01_0337 - 2658647-2658722,2658797-2658915,2658995-2659102,265... 67 5e-12
02_01_0024 + 159595-159801,159892-160017,160201-160338,160431-16... 45 2e-05
06_01_0097 - 810283-810296,810398-810521,810974-811066,811144-81... 44 5e-05
03_01_0305 - 2383187-2383298,2383606-2383684,2383762-2383867,238... 39 0.001
05_06_0240 - 26629218-26629323,26629412-26629490,26629656-266297... 36 0.013
04_04_1151 - 31284094-31284204,31284375-31284434,31284518-312845... 27 3.6
03_02_0540 + 9340379-9340592,9341250-9342988 27 4.7
01_06_1809 - 40029628-40030539 27 4.7
11_06_0596 + 25385744-25388890 27 6.2
05_07_0220 + 28482589-28483752 27 6.2
02_04_0387 - 22548778-22548917,22550635-22550716 27 6.2
11_04_0203 - 14828009-14828110,14828171-14828269,14828375-148284... 26 8.2
07_03_1649 - 28385289-28385358,28387039-28387877 26 8.2
07_01_0201 - 1434651-1435097 26 8.2
07_01_0197 - 1401500-1401946 26 8.2
07_01_0193 - 1368350-1368796 26 8.2
07_01_0189 - 1335197-1335643 26 8.2
05_05_0390 - 24593985-24595205,24595790-24595867,24596234-24596980 26 8.2
03_06_0600 + 34988743-34989407,34990033-34990051 26 8.2
01_05_0695 + 24360307-24361050,24362913-24363094,24363177-243633... 26 8.2
>04_04_0729 +
27612106-27612195,27612284-27612370,27612469-27612528,
27612554-27612688,27612769-27612864,27613149-27613214,
27613647-27613864,27614093-27614189,27614605-27614691,
27614892-27615026,27615121-27615225,27615717-27615845,
27615925-27616028,27616598-27616688,27616774-27616857
Length = 527
Score = 105 bits (252), Expect = 1e-23
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +3
Query: 204 MLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQLQDEEVGDGTXSVVIIAAE 371
MLVDDIGDVT+TNDGATIL+MLEVEHPAAKVLVELA+LQD EVGDGT SVVIIAAE
Sbjct: 1 MLVDDIGDVTITNDGATILRMLEVEHPAAKVLVELAELQDREVGDGTTSVVIIAAE 56
>06_03_1193 -
28298656-28298754,28299303-28299377,28299456-28299544,
28299679-28299760,28300385-28300474,28300557-28300655,
28300733-28300852,28300968-28301084,28301174-28301309,
28301415-28301584,28301744-28301947,28302032-28302157,
28302841-28303101,28303215-28303229
Length = 560
Score = 93.9 bits (223), Expect = 4e-20
Identities = 40/79 (50%), Positives = 62/79 (78%)
Frame = +3
Query: 135 NVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQ 314
N+ + V+++LGP G+DK++ DD G T++NDGATI+++L++ HPAAK+LV++A+
Sbjct: 28 NINACTVVADTVRTTLGPRGMDKLIHDDKGGTTISNDGATIMRLLDIIHPAAKILVDIAK 87
Query: 315 LQDEEVGDGTXSVVIIAAE 371
QD EVGDGT +VV++AAE
Sbjct: 88 SQDSEVGDGTTTVVLLAAE 106
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 90.2 bits (214), Expect = 4e-19
Identities = 46/93 (49%), Positives = 66/93 (70%), Gaps = 3/93 (3%)
Frame = +3
Query: 102 TRSCGDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIG---DVTVTNDGATILKMLE 272
T G+ R + + ++VK++LGP G+DK+L G VTVTNDGATILK L
Sbjct: 11 TEEKGERARMASFVGGMAISDLVKTTLGPKGMDKIL-QSTGRGRSVTVTNDGATILKSLH 69
Query: 273 VEHPAAKVLVELAQLQDEEVGDGTXSVVIIAAE 371
+++PAAKVLV+++++QD+EVGDGT SVV++A E
Sbjct: 70 IDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGE 102
>02_02_0253 -
8325437-8325628,8325705-8325779,8325933-8326037,
8326249-8326374,8326451-8326835,8326931-8327208,
8327294-8327367,8327476-8327547,8327637-8327705,
8340132-8340201,8340806-8340873,8341571-8341643,
8341807-8341868,8342168-8342198
Length = 559
Score = 90.2 bits (214), Expect = 4e-19
Identities = 41/89 (46%), Positives = 60/89 (67%)
Frame = +3
Query: 105 RSCGDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHP 284
R G V N+ +I++++LGP + KML+D G + VTNDG IL+ L++ HP
Sbjct: 16 RESGTKVHHANIQAAKAVADIIRTTLGPQSMLKMLLDAAGGIVVTNDGNCILRELDLAHP 75
Query: 285 AAKVLVELAQLQDEEVGDGTXSVVIIAAE 371
AAK ++EL++ QDEEVGDGT SV+++A E
Sbjct: 76 AAKSMIELSRTQDEEVGDGTTSVIVLAGE 104
>06_03_0353 +
19810945-19810975,19811308-19811369,19811741-19811813,
19813292-19813359,19813496-19813565,19813908-19813976,
19814065-19814136,19814247-19814320,19814420-19814697,
19814804-19815188,19815268-19815393,19815583-19815687,
19815986-19815994,19817040-19817114,19817202-19817390
Length = 561
Score = 89.8 bits (213), Expect = 6e-19
Identities = 40/89 (44%), Positives = 60/89 (67%)
Frame = +3
Query: 105 RSCGDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHP 284
R G V N+ +I++++LGP + KML+D G + VTNDG IL+ +++ HP
Sbjct: 16 RESGTKVHHANIQAAKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILREIDIAHP 75
Query: 285 AAKVLVELAQLQDEEVGDGTXSVVIIAAE 371
AAK ++EL++ QDEEVGDGT SV+++A E
Sbjct: 76 AAKSMIELSRTQDEEVGDGTTSVIVLAGE 104
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 88.2 bits (209), Expect = 2e-18
Identities = 45/89 (50%), Positives = 64/89 (71%), Gaps = 3/89 (3%)
Frame = +3
Query: 114 GDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIG---DVTVTNDGATILKMLEVEHP 284
G+ R + ++VK++LGP G+DK+L G VTVTNDGATILK L +++P
Sbjct: 14 GERARMAAFIGAMAIADLVKTTLGPKGMDKIL-QSTGRGRSVTVTNDGATILKSLHIDNP 72
Query: 285 AAKVLVELAQLQDEEVGDGTXSVVIIAAE 371
AAKVLV+++++QD+EVGDGT SVV++A E
Sbjct: 73 AAKVLVDISKVQDDEVGDGTTSVVVLAGE 101
>06_03_0477 -
21250811-21250981,21251261-21251374,21251447-21251613,
21252051-21252153,21252315-21252367,21252438-21252570,
21252835-21253183,21253685-21254003,21254519-21254717
Length = 535
Score = 85.4 bits (202), Expect = 1e-17
Identities = 41/88 (46%), Positives = 60/88 (68%)
Frame = +3
Query: 102 TRSCGDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEH 281
+R G + N+ I+++SLGP G+DKML GDVT+TNDGATIL+ ++V++
Sbjct: 22 SRLRGLDAQKANIAAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDN 81
Query: 282 PAAKVLVELAQLQDEEVGDGTXSVVIIA 365
AK++VEL+ QD E+GDGT VV++A
Sbjct: 82 QIAKLMVELSCSQDYEIGDGTTGVVVMA 109
>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
Length = 550
Score = 77.4 bits (182), Expect = 3e-15
Identities = 37/83 (44%), Positives = 54/83 (65%)
Frame = +3
Query: 117 DPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKV 296
D VR N+ + V++SLGP G+DKM+ +V +TNDGATIL + + PAA++
Sbjct: 25 DDVRGLNIAAARAVADAVRTSLGPRGMDKMISSGEQEVIITNDGATILSRMSLLQPAARM 84
Query: 297 LVELAQLQDEEVGDGTXSVVIIA 365
L EL++ QD GDGT +VV++A
Sbjct: 85 LAELSRSQDAAAGDGTTTVVVLA 107
>03_06_0362 +
33379489-33379624,33380161-33380423,33380524-33380670,
33380753-33380914,33381681-33381758,33382329-33382462,
33382702-33382774,33382852-33382929,33383002-33383124,
33383223-33383317,33383723-33383932,33384115-33384172,
33384268-33384333
Length = 540
Score = 73.7 bits (173), Expect = 4e-14
Identities = 33/69 (47%), Positives = 48/69 (69%)
Frame = +3
Query: 165 IVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQLQDEEVGDGT 344
I ++SLGP G++KM+++ + + VTND ATI+ LEV+HPAAK+LV + Q EE+GDG
Sbjct: 37 ITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKILVLAGRAQQEEIGDGA 96
Query: 345 XSVVIIAAE 371
+ A E
Sbjct: 97 NLTISFAGE 105
>10_08_0620 - 19321612-19323237
Length = 541
Score = 68.1 bits (159), Expect = 2e-12
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Frame = +3
Query: 117 DPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDI--GD--VTVTNDGATILKMLEVEHP 284
D VR N+ ++SLGP G+DKM+ GD V +TNDGATIL + + P
Sbjct: 25 DDVRGLNIAAGRAVAAAARTSLGPRGMDKMISSSSSGGDQAVIITNDGATILSRMPLLQP 84
Query: 285 AAKVLVELAQLQDEEVGDGTXSVVIIA 365
AA++L +L++ QD GDGT +VV++A
Sbjct: 85 AARMLADLSRSQDAAAGDGTTTVVVLA 111
>05_01_0337 -
2658647-2658722,2658797-2658915,2658995-2659102,
2659187-2659255,2659561-2659655,2659740-2659944,
2660125-2660211,2660291-2660405,2660696-2660802,
2661054-2661146,2661243-2661290,2661345-2661544,
2661993-2662128,2662228-2662291,2662779-2662912
Length = 551
Score = 66.9 bits (156), Expect = 5e-12
Identities = 30/79 (37%), Positives = 48/79 (60%)
Frame = +3
Query: 135 NVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQ 314
N+ +++K++LGP G KMLV GD+ +T DG T+LK +++++P A ++ A
Sbjct: 22 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAV 81
Query: 315 LQDEEVGDGTXSVVIIAAE 371
QD+ GDGT S V+ E
Sbjct: 82 AQDDTSGDGTTSTVLFIGE 100
>02_01_0024 +
159595-159801,159892-160017,160201-160338,160431-160526,
160958-161200,161249-161537,161612-161781,161975-162052,
162156-162227,162345-162449,162555-162647,162737-162829,
163109-163235,163317-163330
Length = 616
Score = 44.8 bits (101), Expect = 2e-05
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Frame = +3
Query: 162 NIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHP----AAKVLVELAQLQDEE 329
++V +LGP G + +L G + NDG T+ K +E+E P AK++ + A ++
Sbjct: 77 DLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDL 136
Query: 330 VGDGTXSVVIIA 365
GDGT + V++A
Sbjct: 137 AGDGTTTSVVLA 148
>06_01_0097 -
810283-810296,810398-810521,810974-811066,811144-811236,
811410-811514,811661-811732,811857-811934,812210-812379,
812507-812741,812832-813074,813243-813338,813445-813582,
814014-814139,814235-814453
Length = 601
Score = 43.6 bits (98), Expect = 5e-05
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Frame = +3
Query: 162 NIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHP----AAKVLVELAQLQDEE 329
++V +LGP G + +L G + NDG T+ + +E+E P AK++ + A ++
Sbjct: 81 DLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAKLVRQAAAKTNDL 140
Query: 330 VGDGTXSVVIIA 365
GDGT + V++A
Sbjct: 141 AGDGTTTSVVLA 152
>03_01_0305 -
2383187-2383298,2383606-2383684,2383762-2383867,
2383941-2384044,2384141-2384240,2384533-2384628,
2384724-2384801,2385355-2385423,2385511-2385591,
2385670-2385759,2385859-2385945,2386022-2386126,
2386591-2386686,2386796-2386971,2387225-2387384,
2387898-2388029,2388236-2388260,2389023-2389174
Length = 615
Score = 39.1 bits (87), Expect = 0.001
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Frame = +3
Query: 168 VKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLE----VEHPAAKVLVELAQLQDEEVG 335
VK ++GP G ++ G VT DG T+ K +E V++ A ++ ++A ++ G
Sbjct: 96 VKVTMGPKGRTVVIEQSFGAPKVTKDGVTVAKSIEFSNRVKNVGASLVKQVANATNDTAG 155
Query: 336 DGTXSVVII 362
DGT ++
Sbjct: 156 DGTTCATVL 164
>05_06_0240 -
26629218-26629323,26629412-26629490,26629656-26629761,
26629844-26629947,26630069-26630168,26630256-26630351,
26630464-26630541,26630603-26630671,26630766-26630846,
26630879-26630935,26631016-26631105,26631192-26631278,
26631690-26631794,26631899-26631994,26632222-26632397,
26632847-26633006,26633151-26633600
Length = 679
Score = 35.5 bits (78), Expect = 0.013
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Frame = +3
Query: 168 VKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPA----AKVLVELAQLQDEEVG 335
VK ++GP G + ++ VT DG T+ K +E E A A ++ ++A+ ++ G
Sbjct: 143 VKVTMGPKGRNVIIERSHRAPKVTKDGVTVAKSIEFEDSAKNVGANLVKQVAEATNKVAG 202
Query: 336 DGTXSVVII 362
DGT ++
Sbjct: 203 DGTTCATVL 211
>04_04_1151 -
31284094-31284204,31284375-31284434,31284518-31284595,
31284688-31284812,31284898-31285906,31286513-31286920,
31287323-31287400,31287524-31287934
Length = 759
Score = 27.5 bits (58), Expect = 3.6
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2
Query: 56 TIKNVDYSRTFVCSRD 103
T+KNV SR FVCSR+
Sbjct: 221 TVKNVARSRVFVCSRE 236
>03_02_0540 + 9340379-9340592,9341250-9342988
Length = 650
Score = 27.1 bits (57), Expect = 4.7
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +2
Query: 2 EKQKKRDGDFKXEFCVKNTIKNVDYSRTFVCSRDKILRRPSENTKR 139
EK K D + K + KN+++N Y+ DKI + E K+
Sbjct: 529 EKYKAEDEEHKKKVDAKNSLENYAYNMRNTIKDDKIASKLPEADKK 574
>01_06_1809 - 40029628-40030539
Length = 303
Score = 27.1 bits (57), Expect = 4.7
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = -2
Query: 182 KGALYYVCYSRCCHYVLCSH--WVSAGSCP 99
KGA + C C LCS WVS G+CP
Sbjct: 263 KGAAFIPCGHTFCR--LCSRELWVSRGNCP 290
>11_06_0596 + 25385744-25388890
Length = 1048
Score = 26.6 bits (56), Expect = 6.2
Identities = 16/61 (26%), Positives = 26/61 (42%)
Frame = +2
Query: 11 KKRDGDFKXEFCVKNTIKNVDYSRTFVCSRDKILRRPSENTKRNGSSGYSKHSKELPWAS 190
K+R D + +K ++ S V ++ R S +R G G + + LPWA
Sbjct: 51 KERASDHQVRAWIKQVMELAYDSNNCV---ERYARTRSGRRRRRGFLGSLRRAARLPWAM 107
Query: 191 W 193
W
Sbjct: 108 W 108
>05_07_0220 + 28482589-28483752
Length = 387
Score = 26.6 bits (56), Expect = 6.2
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -2
Query: 185 PKGALYYVCYSRCCHYV-LCSHWVSAGSCPCYRQRCGYS 72
P G L + Y++ LC+ W G+CP Y +C ++
Sbjct: 299 PMGGLEFEVYNQGMFKTELCNKWEETGACP-YGDQCQFA 336
>02_04_0387 - 22548778-22548917,22550635-22550716
Length = 73
Score = 26.6 bits (56), Expect = 6.2
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -2
Query: 149 CCHYVLCSHWVSAGSCPC 96
CCHY C + S S PC
Sbjct: 45 CCHYDKCYEYCSGDSGPC 62
>11_04_0203 -
14828009-14828110,14828171-14828269,14828375-14828461,
14828733-14829111,14829214-14829377,14829544-14829636,
14829843-14829989,14830065-14830166,14830392-14830490,
14830669-14830803,14830928-14831006,14831111-14831186,
14831281-14831370,14831723-14831798,14831880-14831914,
14832303-14832377,14832468-14832840
Length = 736
Score = 26.2 bits (55), Expect = 8.2
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +2
Query: 218 YWGCYSH*RWCHNIKNAGSGASCCQSLSGTSTAT 319
YW YSH H + A SG+ +L T + T
Sbjct: 514 YWDLYSHLVGYHKLPRAASGSHASAALVPTLSGT 547
>07_03_1649 - 28385289-28385358,28387039-28387877
Length = 302
Score = 26.2 bits (55), Expect = 8.2
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +3
Query: 207 LVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQLQDEEVGDGTXSV 353
L+ D GDV+ ++ +++ L+ + P + VLV D + GT S+
Sbjct: 244 LLVDSGDVSAGSEADGVMRWLDGQEPGSVVLVSFG--SDSKTKKGTTSM 290
>07_01_0201 - 1434651-1435097
Length = 148
Score = 26.2 bits (55), Expect = 8.2
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 245 WCHNIKNAGSGASCCQSLSG 304
WC N +G+GA+C S+ G
Sbjct: 53 WCDNGGTSGTGAACKSSVDG 72
>07_01_0197 - 1401500-1401946
Length = 148
Score = 26.2 bits (55), Expect = 8.2
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 245 WCHNIKNAGSGASCCQSLSG 304
WC N +G+GA+C S+ G
Sbjct: 53 WCDNGGTSGTGAACKSSVDG 72
>07_01_0193 - 1368350-1368796
Length = 148
Score = 26.2 bits (55), Expect = 8.2
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 245 WCHNIKNAGSGASCCQSLSG 304
WC N +G+GA+C S+ G
Sbjct: 53 WCDNGGTSGTGAACKSSVDG 72
>07_01_0189 - 1335197-1335643
Length = 148
Score = 26.2 bits (55), Expect = 8.2
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 245 WCHNIKNAGSGASCCQSLSG 304
WC N +G+GA+C S+ G
Sbjct: 53 WCDNGGTSGTGAACKSSVDG 72
>05_05_0390 - 24593985-24595205,24595790-24595867,24596234-24596980
Length = 681
Score = 26.2 bits (55), Expect = 8.2
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Frame = +3
Query: 198 DKMLVDDIGDVTVTNDGATILKMLEVEHPAAKV-----LVELAQLQDEEVGDG 341
D+ DIGD+ V DG+ I M++VE V V LA +++E G G
Sbjct: 110 DQHPASDIGDLAVREDGSEI--MVDVERSTVPVDADMNNVSLALVKEEAEGGG 160
>03_06_0600 + 34988743-34989407,34990033-34990051
Length = 227
Score = 26.2 bits (55), Expect = 8.2
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -2
Query: 137 VLCSHWVSAGSCPCYRQRCG 78
V C+ WVS CP RCG
Sbjct: 188 VHCNRWVSLFPCPARCARCG 207
>01_05_0695 +
24360307-24361050,24362913-24363094,24363177-24363332,
24363413-24363749
Length = 472
Score = 26.2 bits (55), Expect = 8.2
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +2
Query: 62 KNVDYSRTFVCSRDKILRRPSENTKRNGSSGYSKHSKELPW 184
+NVD +RT V R SEN N +S + +K +PW
Sbjct: 341 QNVDSARTRVFFRSISPEHKSENWCYNQTSPITDETKIVPW 381
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,275,092
Number of Sequences: 37544
Number of extensions: 177262
Number of successful extensions: 455
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 442
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 452
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 588739508
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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