Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_E22
(372 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 146 6e-36
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 146 6e-36
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 93 6e-20
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 93 6e-20
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 92 1e-19
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 92 1e-19
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 92 1e-19
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 91 2e-19
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 91 3e-19
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 91 3e-19
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 91 3e-19
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 90 5e-19
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 90 5e-19
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 78 2e-15
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 66 6e-12
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 66 6e-12
AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock pr... 42 1e-04
L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein. 40 4e-04
Z96047-10|CAH04703.1| 195|Caenorhabditis elegans Hypothetical p... 29 1.4
Z80215-19|CAH19104.1| 195|Caenorhabditis elegans Hypothetical p... 29 1.4
U40942-8|AAC47073.2| 684|Caenorhabditis elegans Hypothetical pr... 28 1.9
L14429-10|AAL00882.1| 69|Caenorhabditis elegans Cu (copper) ch... 27 3.2
AB017201-1|BAA37144.1| 69|Caenorhabditis elegans copper chaper... 27 3.2
AL021175-5|CAA15967.1| 357|Caenorhabditis elegans Hypothetical ... 27 4.3
AC024826-11|AAF60802.1| 246|Caenorhabditis elegans Hypothetical... 27 4.3
Z35598-2|CAA84651.2| 656|Caenorhabditis elegans Hypothetical pr... 27 5.7
U41536-3|AAN39668.1| 1576|Caenorhabditis elegans Kinesin-like pr... 26 7.5
U41536-2|AAM51501.1| 1610|Caenorhabditis elegans Kinesin-like pr... 26 7.5
U41536-1|AAK39239.1| 1595|Caenorhabditis elegans Kinesin-like pr... 26 7.5
AB023496-1|BAA97564.1| 793|Caenorhabditis elegans kinesin like ... 26 7.5
Z83240-3|CAB05813.2| 483|Caenorhabditis elegans Hypothetical pr... 26 9.9
U55367-2|AAA97988.2| 356|Caenorhabditis elegans G protein, alph... 26 9.9
AY008132-1|AAG32085.1| 356|Caenorhabditis elegans heterotrimeri... 26 9.9
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 146 bits (353), Expect = 6e-36
Identities = 72/95 (75%), Positives = 79/95 (83%)
Frame = +3
Query: 87 LSVAGTRSCGDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKM 266
L++ G R+ G +R+QNV NIVKSSLGPVGLDKMLVDD+GDV VTNDGATILK
Sbjct: 9 LALTGKRTTGQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQ 68
Query: 267 LEVEHPAAKVLVELAQLQDEEVGDGTXSVVIIAAE 371
LEVEHPA KVLVELAQLQDEEVGDGT SVVI+AAE
Sbjct: 69 LEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAE 103
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 146 bits (353), Expect = 6e-36
Identities = 72/95 (75%), Positives = 79/95 (83%)
Frame = +3
Query: 87 LSVAGTRSCGDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKM 266
L++ G R+ G +R+QNV NIVKSSLGPVGLDKMLVDD+GDV VTNDGATILK
Sbjct: 9 LALTGKRTTGQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQ 68
Query: 267 LEVEHPAAKVLVELAQLQDEEVGDGTXSVVIIAAE 371
LEVEHPA KVLVELAQLQDEEVGDGT SVVI+AAE
Sbjct: 69 LEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAE 103
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 93.1 bits (221), Expect = 6e-20
Identities = 43/83 (51%), Positives = 59/83 (71%)
Frame = +3
Query: 117 DPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKV 296
+ VR N++ + V++SLGP G+DKM+ GDVT+TNDGATIL + V HP AK+
Sbjct: 30 ESVRNSNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVIHPTAKM 89
Query: 297 LVELAQLQDEEVGDGTXSVVIIA 365
LVEL++ QD E GDGT +VV++A
Sbjct: 90 LVELSKAQDIEAGDGTTTVVVMA 112
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 93.1 bits (221), Expect = 6e-20
Identities = 43/83 (51%), Positives = 59/83 (71%)
Frame = +3
Query: 117 DPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKV 296
+ VR N++ + V++SLGP G+DKM+ GDVT+TNDGATIL + V HP AK+
Sbjct: 30 ESVRNSNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVIHPTAKM 89
Query: 297 LVELAQLQDEEVGDGTXSVVIIA 365
LVEL++ QD E GDGT +VV++A
Sbjct: 90 LVELSKAQDIEAGDGTTTVVVMA 112
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 91.9 bits (218), Expect = 1e-19
Identities = 40/68 (58%), Positives = 56/68 (82%)
Frame = +3
Query: 162 NIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQLQDEEVGDG 341
N +++SLGP GLDKMLV GDVT+TNDGATI++ ++V+H AK++VEL++ QD E+GDG
Sbjct: 47 NTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLMVELSKSQDHEIGDG 106
Query: 342 TXSVVIIA 365
T VV++A
Sbjct: 107 TTGVVVLA 114
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 91.9 bits (218), Expect = 1e-19
Identities = 40/68 (58%), Positives = 56/68 (82%)
Frame = +3
Query: 162 NIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQLQDEEVGDG 341
N +++SLGP GLDKMLV GDVT+TNDGATI++ ++V+H AK++VEL++ QD E+GDG
Sbjct: 47 NTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLMVELSKSQDHEIGDG 106
Query: 342 TXSVVIIA 365
T VV++A
Sbjct: 107 TTGVVVLA 114
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 91.9 bits (218), Expect = 1e-19
Identities = 40/68 (58%), Positives = 56/68 (82%)
Frame = +3
Query: 162 NIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQLQDEEVGDG 341
N +++SLGP GLDKMLV GDVT+TNDGATI++ ++V+H AK++VEL++ QD E+GDG
Sbjct: 47 NTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLMVELSKSQDHEIGDG 106
Query: 342 TXSVVIIA 365
T VV++A
Sbjct: 107 TTGVVVLA 114
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 91.1 bits (216), Expect = 2e-19
Identities = 42/95 (44%), Positives = 63/95 (66%)
Frame = +3
Query: 87 LSVAGTRSCGDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKM 266
LS R G V+ N+ +++++SLGP + KML+D +G + +TNDG IL+
Sbjct: 12 LSQGTKRESGHQVQIGNINACKTIADVIRTSLGPRAMLKMLMDPMGGIVMTNDGNAILRE 71
Query: 267 LEVEHPAAKVLVELAQLQDEEVGDGTXSVVIIAAE 371
+ V+HPAAK ++E+A+ QDEE GDGT SV+I+A E
Sbjct: 72 ITVKHPAAKSMIEIARTQDEETGDGTTSVIILAGE 106
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 90.6 bits (215), Expect = 3e-19
Identities = 44/90 (48%), Positives = 63/90 (70%), Gaps = 4/90 (4%)
Frame = +3
Query: 114 GDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLV----DDIGDVTVTNDGATILKMLEVEH 281
G+ R + + ++VKS+LGP G+DK+L+ + G + VTNDGATILK + V++
Sbjct: 16 GESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTNDGATILKSIGVDN 75
Query: 282 PAAKVLVELAQLQDEEVGDGTXSVVIIAAE 371
PAAKVLV+++ QD EVGDGT SV ++AAE
Sbjct: 76 PAAKVLVDMSMTQDHEVGDGTTSVTVLAAE 105
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 90.6 bits (215), Expect = 3e-19
Identities = 44/90 (48%), Positives = 63/90 (70%), Gaps = 4/90 (4%)
Frame = +3
Query: 114 GDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLV----DDIGDVTVTNDGATILKMLEVEH 281
G+ R + + ++VKS+LGP G+DK+L+ + G + VTNDGATILK + V++
Sbjct: 16 GESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTNDGATILKSIGVDN 75
Query: 282 PAAKVLVELAQLQDEEVGDGTXSVVIIAAE 371
PAAKVLV+++ QD EVGDGT SV ++AAE
Sbjct: 76 PAAKVLVDMSMTQDHEVGDGTTSVTVLAAE 105
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 90.6 bits (215), Expect = 3e-19
Identities = 44/90 (48%), Positives = 63/90 (70%), Gaps = 4/90 (4%)
Frame = +3
Query: 114 GDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLV----DDIGDVTVTNDGATILKMLEVEH 281
G+ R + + ++VKS+LGP G+DK+L+ + G + VTNDGATILK + V++
Sbjct: 16 GESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTNDGATILKSIGVDN 75
Query: 282 PAAKVLVELAQLQDEEVGDGTXSVVIIAAE 371
PAAKVLV+++ QD EVGDGT SV ++AAE
Sbjct: 76 PAAKVLVDMSMTQDHEVGDGTTSVTVLAAE 105
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 89.8 bits (213), Expect = 5e-19
Identities = 39/68 (57%), Positives = 56/68 (82%)
Frame = +3
Query: 168 VKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQLQDEEVGDGTX 347
++++LGP GLDK++VD G T++NDGATILK+L++ PAA +V++A+ QD EVGDGT
Sbjct: 36 IRTTLGPRGLDKLIVDSKGATTISNDGATILKLLDIVFPAASTMVDIARSQDAEVGDGTT 95
Query: 348 SVVIIAAE 371
SVV++AAE
Sbjct: 96 SVVVLAAE 103
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 89.8 bits (213), Expect = 5e-19
Identities = 39/68 (57%), Positives = 56/68 (82%)
Frame = +3
Query: 168 VKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQLQDEEVGDGTX 347
++++LGP GLDK++VD G T++NDGATILK+L++ PAA +V++A+ QD EVGDGT
Sbjct: 36 IRTTLGPRGLDKLIVDSKGATTISNDGATILKLLDIVFPAASTMVDIARSQDAEVGDGTT 95
Query: 348 SVVIIAAE 371
SVV++AAE
Sbjct: 96 SVVVLAAE 103
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 78.2 bits (184), Expect = 2e-15
Identities = 33/84 (39%), Positives = 59/84 (70%)
Frame = +3
Query: 117 DPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKV 296
D +N+ + ++S+ GP G++KM+++ I + VTND ATILK LE++HPAA++
Sbjct: 25 DEAVQRNIEACTELASQIRSAYGPNGMNKMVINHIEKLFVTNDAATILKELEIQHPAARI 84
Query: 297 LVELAQLQDEEVGDGTXSVVIIAA 368
++ ++Q++++GD T +VVI+AA
Sbjct: 85 IIMATEMQEKQIGDNTNTVVILAA 108
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 66.5 bits (155), Expect = 6e-12
Identities = 28/79 (35%), Positives = 47/79 (59%)
Frame = +3
Query: 135 NVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQ 314
N+ ++++S+LGP G KMLV GD+ +T DG +L + ++HP A ++ + +
Sbjct: 23 NISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHPTASMIAKAST 82
Query: 315 LQDEEVGDGTXSVVIIAAE 371
QD+ GDGT S V++ E
Sbjct: 83 AQDDVTGDGTTSTVLLIGE 101
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 66.5 bits (155), Expect = 6e-12
Identities = 28/79 (35%), Positives = 47/79 (59%)
Frame = +3
Query: 135 NVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQ 314
N+ ++++S+LGP G KMLV GD+ +T DG +L + ++HP A ++ + +
Sbjct: 23 NISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHPTASMIAKAST 82
Query: 315 LQDEEVGDGTXSVVIIAAE 371
QD+ GDGT S V++ E
Sbjct: 83 AQDDVTGDGTTSTVLLIGE 101
>AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock
protein protein 60 protein.
Length = 568
Score = 41.9 bits (94), Expect = 1e-04
Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Frame = +3
Query: 168 VKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEV----EHPAAKVLVELAQLQDEEVG 335
V ++GP G + ++ G +T DG T+ K +++ ++ AK++ ++A +EE G
Sbjct: 42 VSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIDLKDKYQNLGAKLIQDVANKANEEAG 101
Query: 336 DGTXSVVIIA 365
DGT ++A
Sbjct: 102 DGTTCATVLA 111
>L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein.
Length = 568
Score = 40.3 bits (90), Expect = 4e-04
Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Frame = +3
Query: 168 VKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEV----EHPAAKVLVELAQLQDEEVG 335
V ++GP G + ++ G +T DG T+ K +++ ++ AK++ ++A +EE G
Sbjct: 42 VSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIDLKDKYQNLGAKLIQDVANKANEEAG 101
Query: 336 DGTXSVVII 362
DGT ++
Sbjct: 102 DGTTCATVL 110
>Z96047-10|CAH04703.1| 195|Caenorhabditis elegans Hypothetical
protein DY3.8 protein.
Length = 195
Score = 28.7 bits (61), Expect = 1.4
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -2
Query: 254 CGTIVSDCNIPNIVNQHLIQTNWPKGALYYVCYSRCCHYVL 132
CG V C+I IVN +L++ W G L Y+ S YVL
Sbjct: 71 CGMAV--CSIIVIVNHYLLEKKWVWGGLLYL--SNIMFYVL 107
>Z80215-19|CAH19104.1| 195|Caenorhabditis elegans Hypothetical
protein DY3.8 protein.
Length = 195
Score = 28.7 bits (61), Expect = 1.4
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -2
Query: 254 CGTIVSDCNIPNIVNQHLIQTNWPKGALYYVCYSRCCHYVL 132
CG V C+I IVN +L++ W G L Y+ S YVL
Sbjct: 71 CGMAV--CSIIVIVNHYLLEKKWVWGGLLYL--SNIMFYVL 107
>U40942-8|AAC47073.2| 684|Caenorhabditis elegans Hypothetical
protein K02E10.7 protein.
Length = 684
Score = 28.3 bits (60), Expect = 1.9
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +3
Query: 228 VTVTNDGATILKMLEVEHPAAKVLVELAQLQD 323
+T ++G+T+ K++ +EHPA ++ QD
Sbjct: 90 LTAHDEGSTLQKIISIEHPAIVQTFSVSHFQD 121
>L14429-10|AAL00882.1| 69|Caenorhabditis elegans Cu (copper)
chaperonin protein 1 protein.
Length = 69
Score = 27.5 bits (58), Expect = 3.2
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +3
Query: 162 NIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQLQ 320
N + LG +G DK+ +DDI T T L +V K E+ QLQ
Sbjct: 17 NAARKVLGKLGEDKIKIDDINVETKKITVTTDLPASDVLEALKKTGKEIKQLQ 69
>AB017201-1|BAA37144.1| 69|Caenorhabditis elegans copper chaperone
protein.
Length = 69
Score = 27.5 bits (58), Expect = 3.2
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +3
Query: 162 NIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQLQ 320
N + LG +G DK+ +DDI T T L +V K E+ QLQ
Sbjct: 17 NAARKVLGKLGEDKIKIDDINVETKKITVTTDLPASDVLEALKKTGKEIKQLQ 69
>AL021175-5|CAA15967.1| 357|Caenorhabditis elegans Hypothetical
protein Y6E2A.6 protein.
Length = 357
Score = 27.1 bits (57), Expect = 4.3
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -1
Query: 129 FSLGLRRILSLLQTKVRL*STFFIVFLTQNSXLK 28
F L ILS +QT V + TF IVF T + K
Sbjct: 14 FYLRASHILSCIQTPVNIFGTFIIVFKTPKNMEK 47
>AC024826-11|AAF60802.1| 246|Caenorhabditis elegans Hypothetical
protein Y55F3AM.10 protein.
Length = 246
Score = 27.1 bits (57), Expect = 4.3
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +3
Query: 219 IGDVTVTNDGATILKMLEVEHPA---AKVLVELAQLQDEEVGDGTXSVVI 359
+G T G ++L+ ++ HP A+ L +L + + V GT SV +
Sbjct: 9 LGSHHATTSGGSLLERADLSHPIPENARKLAQLVEYDESRVELGTHSVFV 58
>Z35598-2|CAA84651.2| 656|Caenorhabditis elegans Hypothetical
protein F10F2.4 protein.
Length = 656
Score = 26.6 bits (56), Expect = 5.7
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -2
Query: 236 DCNIPNIVNQHLIQTNWPKGALYYVCYSRCCHYVLCSHWVSAGSC 102
DC++ +IV HL+ + L Y C+S Y L + S C
Sbjct: 558 DCSLYDIV-PHLLNQSQISDPLLYYCFSGSWQYPLLPYLASVKPC 601
>U41536-3|AAN39668.1| 1576|Caenorhabditis elegans Kinesin-like protein
protein 4,isoform c protein.
Length = 1576
Score = 26.2 bits (55), Expect = 7.5
Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 3/54 (5%)
Frame = -2
Query: 251 GTIVSDCNIPNIVNQHLIQTNWPKGALYYV---CYSRCCHYVLCSHWVSAGSCP 99
G + SD N+P + H + P+G L V Y H CS S CP
Sbjct: 1233 GEMTSDENVPRVAGLHSMLPLEPEGNLLMVPIQKYDDKDHVATCSWDSSVHDCP 1286
>U41536-2|AAM51501.1| 1610|Caenorhabditis elegans Kinesin-like protein
protein 4,isoform b protein.
Length = 1610
Score = 26.2 bits (55), Expect = 7.5
Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 3/54 (5%)
Frame = -2
Query: 251 GTIVSDCNIPNIVNQHLIQTNWPKGALYYV---CYSRCCHYVLCSHWVSAGSCP 99
G + SD N+P + H + P+G L V Y H CS S CP
Sbjct: 1233 GEMTSDENVPRVAGLHSMLPLEPEGNLLMVPIQKYDDKDHVATCSWDSSVHDCP 1286
>U41536-1|AAK39239.1| 1595|Caenorhabditis elegans Kinesin-like protein
protein 4,isoform a protein.
Length = 1595
Score = 26.2 bits (55), Expect = 7.5
Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 3/54 (5%)
Frame = -2
Query: 251 GTIVSDCNIPNIVNQHLIQTNWPKGALYYV---CYSRCCHYVLCSHWVSAGSCP 99
G + SD N+P + H + P+G L V Y H CS S CP
Sbjct: 1233 GEMTSDENVPRVAGLHSMLPLEPEGNLLMVPIQKYDDKDHVATCSWDSSVHDCP 1286
>AB023496-1|BAA97564.1| 793|Caenorhabditis elegans kinesin like
protein KLP-4 protein.
Length = 793
Score = 26.2 bits (55), Expect = 7.5
Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 3/54 (5%)
Frame = -2
Query: 251 GTIVSDCNIPNIVNQHLIQTNWPKGALYYV---CYSRCCHYVLCSHWVSAGSCP 99
G + SD N+P + H + P+G L V Y H CS S CP
Sbjct: 653 GEMTSDENVPRVAGLHSMLPLEPEGNLLMVPIQKYDDKDHVATCSWDSSVHDCP 706
>Z83240-3|CAB05813.2| 483|Caenorhabditis elegans Hypothetical
protein T23H4.1 protein.
Length = 483
Score = 25.8 bits (54), Expect = 9.9
Identities = 10/43 (23%), Positives = 19/43 (44%)
Frame = -2
Query: 248 TIVSDCNIPNIVNQHLIQTNWPKGALYYVCYSRCCHYVLCSHW 120
T D N+P +VN+ ++ + +++ Y Y C W
Sbjct: 105 TAFEDDNLPEVVNREYTMVSYYQWVPFFLVYVAFSFYAPCLIW 147
>U55367-2|AAA97988.2| 356|Caenorhabditis elegans G protein, alpha
subunit protein 10 protein.
Length = 356
Score = 25.8 bits (54), Expect = 9.9
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -3
Query: 73 VDIFYCIFNTKFTFKIAVTLFL 8
+ +F+ +FN KF K AV LFL
Sbjct: 250 IRLFWTVFNGKFFKKAAVILFL 271
>AY008132-1|AAG32085.1| 356|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 356
Score = 25.8 bits (54), Expect = 9.9
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -3
Query: 73 VDIFYCIFNTKFTFKIAVTLFL 8
+ +F+ +FN KF K AV LFL
Sbjct: 250 IRLFWTVFNGKFFKKAAVILFL 271
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,940,839
Number of Sequences: 27780
Number of extensions: 155015
Number of successful extensions: 398
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 395
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 535612900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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