Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_E21
(461 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0263 + 2136858-2137331 105 2e-23
12_01_0323 - 2459854-2460306 105 2e-23
11_01_0317 - 2365493-2365786,2365825-2365953 69 1e-12
01_01_0484 - 3558941-3559303,3559439-3559560,3560596-3560743,356... 29 1.8
03_05_0697 + 26888791-26888861,26890468-26890579,26891561-268917... 27 5.6
06_03_1161 - 28089177-28089359,28089473-28089700,28089776-280898... 27 7.3
07_03_0256 - 15875066-15877025,15877292-15877911 27 9.7
03_02_0446 - 8567436-8567567,8567649-8567768,8569837-8569914,857... 27 9.7
>01_01_0263 + 2136858-2137331
Length = 157
Score = 105 bits (252), Expect = 2e-23
Identities = 48/70 (68%), Positives = 61/70 (87%)
Frame = +3
Query: 156 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGAT 335
S ELR K+NV+S+PIRKDDEVQVVRG YKG++ GKV+QVYR+++V+++ERI REK NG+T
Sbjct: 35 SSELRHKYNVRSIPIRKDDEVQVVRGSYKGRE-GKVVQVYRRRWVIHVERITREKVNGST 93
Query: 336 AYVGIHPFKV 365
VGIHP KV
Sbjct: 94 VNVGIHPSKV 103
Score = 50.0 bits (114), Expect = 9e-07
Identities = 24/34 (70%), Positives = 28/34 (82%)
Frame = +2
Query: 53 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 154
MK N +VTSSRRK RK HF+APS +RRVLMS+ L
Sbjct: 1 MKRNPRVTSSRRKCRKAHFTAPSSVRRVLMSAAL 34
Score = 36.3 bits (80), Expect = 0.012
Identities = 15/25 (60%), Positives = 21/25 (84%)
Frame = +1
Query: 355 PSKCVIVKLKMNXDRKAILXRQSKG 429
PSK V+ KLK++ DRKAIL R+++G
Sbjct: 100 PSKVVVTKLKLDKDRKAILDRKARG 124
>12_01_0323 - 2459854-2460306
Length = 150
Score = 105 bits (251), Expect = 2e-23
Identities = 48/70 (68%), Positives = 61/70 (87%)
Frame = +3
Query: 156 SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGAT 335
S ELR K+NV+S+PIRKDDEVQVVRG YKG++ GKV+QVYR+++V+++ERI REK NG+T
Sbjct: 35 STELRHKYNVRSIPIRKDDEVQVVRGSYKGRE-GKVVQVYRRRWVIHVERITREKVNGST 93
Query: 336 AYVGIHPFKV 365
VGIHP KV
Sbjct: 94 VNVGIHPSKV 103
Score = 50.0 bits (114), Expect = 9e-07
Identities = 24/34 (70%), Positives = 28/34 (82%)
Frame = +2
Query: 53 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 154
MK N +VTSSRRK RK HF+APS +RRVLMS+ L
Sbjct: 1 MKRNPRVTSSRRKCRKAHFTAPSSVRRVLMSAAL 34
Score = 35.5 bits (78), Expect = 0.021
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +1
Query: 355 PSKCVIVKLKMNXDRKAILXRQSKG 429
PSK V+ KLK++ DRKAIL R++ G
Sbjct: 100 PSKVVVTKLKLDKDRKAILDRKASG 124
>11_01_0317 - 2365493-2365786,2365825-2365953
Length = 140
Score = 69.3 bits (162), Expect = 1e-12
Identities = 31/48 (64%), Positives = 41/48 (85%)
Frame = +3
Query: 222 VVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPFKV 365
VVRG YKG++ GKV+QVYR+++V+++ERI REK NG+T VGIHP KV
Sbjct: 44 VVRGSYKGRE-GKVVQVYRRRWVIHVERITREKVNGSTVNVGIHPSKV 90
Score = 50.0 bits (114), Expect = 9e-07
Identities = 24/34 (70%), Positives = 28/34 (82%)
Frame = +2
Query: 53 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 154
MK N +VTSSRRK RK HF+APS +RRVLMS+ L
Sbjct: 1 MKRNPRVTSSRRKCRKAHFTAPSSVRRVLMSAAL 34
Score = 35.5 bits (78), Expect = 0.021
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +1
Query: 355 PSKCVIVKLKMNXDRKAILXRQSKG 429
PSK V+ KLK++ DRKAIL R++ G
Sbjct: 87 PSKVVVTKLKLDKDRKAILDRKASG 111
>01_01_0484 - 3558941-3559303,3559439-3559560,3560596-3560743,
3560853-3561491,3562154-3562450,3562553-3563407,
3564363-3564545,3565041-3565118,3565762-3565974,
3566075-3566238,3566357-3566445,3566761-3566891,
3566980-3567148,3567255-3567327,3567525-3567606,
3567677-3567808,3568743-3568818,3568965-3569065,
3569446-3569636,3569738-3569912,3570604-3570854,
3571327-3571603,3572184-3572267,3572496-3573206
Length = 1867
Score = 29.1 bits (62), Expect = 1.8
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1
Query: 374 TITHFEGVNADICCCTIGLFSLNPLNVYNKL 282
T+ HF G+ CC + L +NP NV + L
Sbjct: 1747 TVLHFVGLLCGSCCIYMPLLIVNPTNVLSDL 1777
>03_05_0697 + 26888791-26888861,26890468-26890579,26891561-26891757,
26892215-26892266,26893530-26893795,26894007-26894229,
26895154-26895327,26895408-26895485,26895566-26895817,
26896138-26898204,26899477-26901322,26901474-26901574,
26902179-26902535,26902681-26902799,26903558-26903559,
26903630-26903662,26903709-26903841,26904285-26904537,
26905688-26905912,26906401-26906466,26907373-26907471,
26908528-26908545,26908546-26908893,26909878-26910354
Length = 2522
Score = 27.5 bits (58), Expect = 5.6
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 162 ELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERI 308
E KF + P K D +Q+V + + QQ + V K+F +YI +
Sbjct: 1278 ETTWKFLATTNPYEKVDRLQIVSEYMEIQQTDGHVDVSAKEFKMYISSL 1326
>06_03_1161 -
28089177-28089359,28089473-28089700,28089776-28089814,
28090681-28090737,28090924-28091046
Length = 209
Score = 27.1 bits (57), Expect = 7.3
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 192 MPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIE 302
M +R D VQV+ G KG +VG+V ++++ V ++
Sbjct: 93 MHVRIGDTVQVIAGREKG-KVGEVTRLFKHNSTVIVK 128
>07_03_0256 - 15875066-15877025,15877292-15877911
Length = 859
Score = 26.6 bits (56), Expect = 9.7
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +1
Query: 193 CLFAKTMKFRLYVDTTKVNRLAK*CRCIVKSLLYTLR 303
C K + V TT++N +AK C C +Y ++
Sbjct: 226 CALVKNSQGSRIVTTTRINEIAKSCCCSYGDQVYEMK 262
>03_02_0446 -
8567436-8567567,8567649-8567768,8569837-8569914,
8570018-8570122,8570214-8570306,8570464-8570619
Length = 227
Score = 26.6 bits (56), Expect = 9.7
Identities = 11/49 (22%), Positives = 26/49 (53%)
Frame = +3
Query: 159 KELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIER 305
+EL+Q+ + ++P DDE + + +++ R++FV++ R
Sbjct: 13 EELQQQHDEPAVPSADDDEAEAEENERRNRELKAGFHPLRRRFVLWYTR 61
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,315,571
Number of Sequences: 37544
Number of extensions: 214868
Number of successful extensions: 501
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 499
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 919380308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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