Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_E21
(461 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69392-1|CAA49189.1| 145|Homo sapiens ribosomal protein L26 pro... 136 5e-32
L07287-1|AAA60279.1| 145|Homo sapiens ribosomal protein L26 pro... 136 5e-32
CR456828-1|CAG33109.1| 145|Homo sapiens RPL26 protein. 136 5e-32
BC071664-1|AAH71664.1| 145|Homo sapiens RPL26 protein protein. 136 5e-32
BC070192-1|AAH70192.1| 145|Homo sapiens ribosomal protein L26-l... 136 5e-32
BC017360-1|AAH17360.1| 145|Homo sapiens ribosomal protein L26-l... 136 5e-32
AB061829-1|BAB79467.1| 145|Homo sapiens ribosomal protein L26 p... 136 5e-32
BC000573-1|AAH00573.1| 139|Homo sapiens cornichon homolog 4 (Dr... 29 5.9
AK222634-1|BAD96354.1| 139|Homo sapiens HSPC163 protein variant... 29 5.9
>X69392-1|CAA49189.1| 145|Homo sapiens ribosomal protein L26
protein.
Length = 145
Score = 136 bits (328), Expect = 5e-32
Identities = 60/72 (83%), Positives = 68/72 (94%)
Frame = +3
Query: 150 PXSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 329
P SKELRQK+NV+SMPIRKDDEVQVVRGHYKGQQ+GKV+QVYRKK+V+YIER+QREKANG
Sbjct: 33 PLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANG 92
Query: 330 ATAYVGIHPFKV 365
T +VGIHP KV
Sbjct: 93 TTVHVGIHPSKV 104
Score = 59.3 bits (137), Expect = 6e-09
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +2
Query: 53 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 154
MKFN VTS R KNRKRHF+APSHIRR +MSSPL
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPL 34
Score = 35.1 bits (77), Expect = 0.12
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = +1
Query: 280 KSLLYTLRGFKEKRPMVQQHMSAFTPSKCVIVKLKMNXDRKAILXRQSK 426
K ++Y R +EK H+ PSK VI +LK++ DRK IL R++K
Sbjct: 77 KYVIYIERVQREKANGTTVHVGIH-PSKVVITRLKLDKDRKKILERKAK 124
>L07287-1|AAA60279.1| 145|Homo sapiens ribosomal protein L26
protein.
Length = 145
Score = 136 bits (328), Expect = 5e-32
Identities = 60/72 (83%), Positives = 68/72 (94%)
Frame = +3
Query: 150 PXSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 329
P SKELRQK+NV+SMPIRKDDEVQVVRGHYKGQQ+GKV+QVYRKK+V+YIER+QREKANG
Sbjct: 33 PLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANG 92
Query: 330 ATAYVGIHPFKV 365
T +VGIHP KV
Sbjct: 93 TTVHVGIHPSKV 104
Score = 59.3 bits (137), Expect = 6e-09
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +2
Query: 53 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 154
MKFN VTS R KNRKRHF+APSHIRR +MSSPL
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPL 34
Score = 35.1 bits (77), Expect = 0.12
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = +1
Query: 280 KSLLYTLRGFKEKRPMVQQHMSAFTPSKCVIVKLKMNXDRKAILXRQSK 426
K ++Y R +EK H+ PSK VI +LK++ DRK IL R++K
Sbjct: 77 KYVIYIERVQREKANGTTVHVGIH-PSKVVITRLKLDKDRKKILERKAK 124
>CR456828-1|CAG33109.1| 145|Homo sapiens RPL26 protein.
Length = 145
Score = 136 bits (328), Expect = 5e-32
Identities = 60/72 (83%), Positives = 68/72 (94%)
Frame = +3
Query: 150 PXSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 329
P SKELRQK+NV+SMPIRKDDEVQVVRGHYKGQQ+GKV+QVYRKK+V+YIER+QREKANG
Sbjct: 33 PLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANG 92
Query: 330 ATAYVGIHPFKV 365
T +VGIHP KV
Sbjct: 93 TTVHVGIHPSKV 104
Score = 59.3 bits (137), Expect = 6e-09
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +2
Query: 53 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 154
MKFN VTS R KNRKRHF+APSHIRR +MSSPL
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPL 34
Score = 35.1 bits (77), Expect = 0.12
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = +1
Query: 280 KSLLYTLRGFKEKRPMVQQHMSAFTPSKCVIVKLKMNXDRKAILXRQSK 426
K ++Y R +EK H+ PSK VI +LK++ DRK IL R++K
Sbjct: 77 KYVIYIERVQREKANGTTVHVGIH-PSKVVITRLKLDKDRKKILERKAK 124
>BC071664-1|AAH71664.1| 145|Homo sapiens RPL26 protein protein.
Length = 145
Score = 136 bits (328), Expect = 5e-32
Identities = 60/72 (83%), Positives = 68/72 (94%)
Frame = +3
Query: 150 PXSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 329
P SKELRQK+NV+SMPIRKDDEVQVVRGHYKGQQ+GKV+QVYRKK+V+YIER+QREKANG
Sbjct: 33 PLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANG 92
Query: 330 ATAYVGIHPFKV 365
T +VGIHP KV
Sbjct: 93 TTVHVGIHPSKV 104
Score = 59.3 bits (137), Expect = 6e-09
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +2
Query: 53 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 154
MKFN VTS R KNRKRHF+APSHIRR +MSSPL
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPL 34
Score = 35.1 bits (77), Expect = 0.12
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = +1
Query: 280 KSLLYTLRGFKEKRPMVQQHMSAFTPSKCVIVKLKMNXDRKAILXRQSK 426
K ++Y R +EK H+ PSK VI +LK++ DRK IL R++K
Sbjct: 77 KYVIYIERVQREKANGTTVHVGIH-PSKVVITRLKLDKDRKKILERKAK 124
>BC070192-1|AAH70192.1| 145|Homo sapiens ribosomal protein L26-like
1 protein.
Length = 145
Score = 136 bits (328), Expect = 5e-32
Identities = 60/72 (83%), Positives = 68/72 (94%)
Frame = +3
Query: 150 PXSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 329
P SKELRQK+NV+SMPIRKDDEVQVVRGHYKGQQ+GKV+QVYRKK+V+YIER+QREKANG
Sbjct: 33 PLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANG 92
Query: 330 ATAYVGIHPFKV 365
T +VGIHP KV
Sbjct: 93 TTVHVGIHPSKV 104
Score = 58.8 bits (136), Expect = 8e-09
Identities = 26/34 (76%), Positives = 29/34 (85%)
Frame = +2
Query: 53 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 154
MKFN VTS R KNRKRHF+APSH+RR +MSSPL
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHVRRKIMSSPL 34
Score = 35.1 bits (77), Expect = 0.12
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = +1
Query: 280 KSLLYTLRGFKEKRPMVQQHMSAFTPSKCVIVKLKMNXDRKAILXRQSK 426
K ++Y R +EK H+ PSK VI +LK++ DRK IL R++K
Sbjct: 77 KYVIYIERVQREKANGTTVHVGIH-PSKVVITRLKLDKDRKKILERKAK 124
>BC017360-1|AAH17360.1| 145|Homo sapiens ribosomal protein L26-like
1 protein.
Length = 145
Score = 136 bits (328), Expect = 5e-32
Identities = 60/72 (83%), Positives = 68/72 (94%)
Frame = +3
Query: 150 PXSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 329
P SKELRQK+NV+SMPIRKDDEVQVVRGHYKGQQ+GKV+QVYRKK+V+YIER+QREKANG
Sbjct: 33 PLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANG 92
Query: 330 ATAYVGIHPFKV 365
T +VGIHP KV
Sbjct: 93 TTVHVGIHPSKV 104
Score = 58.8 bits (136), Expect = 8e-09
Identities = 26/34 (76%), Positives = 29/34 (85%)
Frame = +2
Query: 53 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 154
MKFN VTS R KNRKRHF+APSH+RR +MSSPL
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHVRRKIMSSPL 34
Score = 35.1 bits (77), Expect = 0.12
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = +1
Query: 280 KSLLYTLRGFKEKRPMVQQHMSAFTPSKCVIVKLKMNXDRKAILXRQSK 426
K ++Y R +EK H+ PSK VI +LK++ DRK IL R++K
Sbjct: 77 KYVIYIERVQREKANGTTVHVGIH-PSKVVITRLKLDKDRKKILERKAK 124
>AB061829-1|BAB79467.1| 145|Homo sapiens ribosomal protein L26
protein.
Length = 145
Score = 136 bits (328), Expect = 5e-32
Identities = 60/72 (83%), Positives = 68/72 (94%)
Frame = +3
Query: 150 PXSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 329
P SKELRQK+NV+SMPIRKDDEVQVVRGHYKGQQ+GKV+QVYRKK+V+YIER+QREKANG
Sbjct: 33 PLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANG 92
Query: 330 ATAYVGIHPFKV 365
T +VGIHP KV
Sbjct: 93 TTVHVGIHPSKV 104
Score = 59.3 bits (137), Expect = 6e-09
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +2
Query: 53 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 154
MKFN VTS R KNRKRHF+APSHIRR +MSSPL
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPL 34
Score = 35.1 bits (77), Expect = 0.12
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = +1
Query: 280 KSLLYTLRGFKEKRPMVQQHMSAFTPSKCVIVKLKMNXDRKAILXRQSK 426
K ++Y R +EK H+ PSK VI +LK++ DRK IL R++K
Sbjct: 77 KYVIYIERVQREKANGTTVHVGIH-PSKVVITRLKLDKDRKKILERKAK 124
>BC000573-1|AAH00573.1| 139|Homo sapiens cornichon homolog 4
(Drosophila) protein.
Length = 139
Score = 29.5 bits (63), Expect = 5.9
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = -1
Query: 407 IALRSXFIFNLTITHFEGVNADICCCTIGLFSLNPL---NVYNKLFTIHLHHFANLLTFV 237
I L FI L+ + +NA CC + + + L + L + LH F LL
Sbjct: 17 IFLSVYFIITLSDLECDYINARSCCSKLNKWVIPELIGHTIVTVLLLMSLHWFIFLLNLP 76
Query: 236 VSTYNL 219
V+T+N+
Sbjct: 77 VATWNI 82
>AK222634-1|BAD96354.1| 139|Homo sapiens HSPC163 protein variant
protein.
Length = 139
Score = 29.5 bits (63), Expect = 5.9
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = -1
Query: 407 IALRSXFIFNLTITHFEGVNADICCCTIGLFSLNPL---NVYNKLFTIHLHHFANLLTFV 237
I L FI L+ + +NA CC + + + L + L + LH F LL
Sbjct: 17 IFLSVYFIITLSDLECDYINARSCCSKLNKWVIPELIGHTIVTVLLLMSLHWFIFLLNLP 76
Query: 236 VSTYNL 219
V+T+N+
Sbjct: 77 VATWNI 82
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,276,642
Number of Sequences: 237096
Number of extensions: 1180414
Number of successful extensions: 2729
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2729
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3929066862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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