Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_E21
         (461 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071133-1|AAL48755.1|  149|Drosophila melanogaster RE17611p pro...   128   5e-30
AE014296-3077|AAF49215.1|  149|Drosophila melanogaster CG6846-PA...   128   5e-30
BT003208-1|AAO24963.1|  478|Drosophila melanogaster SD23764p pro...    30   1.7  
AE013599-1621|AAF58436.2|  478|Drosophila melanogaster CG3884-PA...    30   1.7  
BT022707-1|AAY55123.1| 1316|Drosophila melanogaster RH74732p pro...    28   5.3  
X03431-3|CAB57797.1|  471|Drosophila melanogaster protein ( Dros...    27   9.3  
AE014297-756|AAF54239.3| 1052|Drosophila melanogaster CG31462-PA...    27   9.3  

>AY071133-1|AAL48755.1|  149|Drosophila melanogaster RE17611p
           protein.
          Length = 149

 Score =  128 bits (308), Expect = 5e-30
 Identities = 56/72 (77%), Positives = 64/72 (88%)
 Frame = +3

Query: 150 PXSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 329
           P SKELRQK+NV+SMPIR+DDEVQV+RGH+KG QVGKV+Q YRKKFVVY+E+IQRE ANG
Sbjct: 33  PLSKELRQKYNVRSMPIRRDDEVQVIRGHFKGNQVGKVVQAYRKKFVVYVEKIQRENANG 92

Query: 330 ATAYVGIHPFKV 365
              YVGIHP KV
Sbjct: 93  TNVYVGIHPSKV 104



 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = +2

Query: 53  MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 154
           MK N  V+SSRRKNRKRHF APSHIRR LMS+PL
Sbjct: 1   MKQNPFVSSSRRKNRKRHFQAPSHIRRRLMSAPL 34



 Score = 37.9 bits (84), Expect = 0.007
 Identities = 17/25 (68%), Positives = 21/25 (84%)
 Frame = +1

Query: 355 PSKCVIVKLKMNXDRKAILXRQSKG 429
           PSK +IVKLK++ DRKAIL R+ KG
Sbjct: 101 PSKVLIVKLKLDKDRKAILERRGKG 125


>AE014296-3077|AAF49215.1|  149|Drosophila melanogaster CG6846-PA
           protein.
          Length = 149

 Score =  128 bits (308), Expect = 5e-30
 Identities = 56/72 (77%), Positives = 64/72 (88%)
 Frame = +3

Query: 150 PXSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 329
           P SKELRQK+NV+SMPIR+DDEVQV+RGH+KG QVGKV+Q YRKKFVVY+E+IQRE ANG
Sbjct: 33  PLSKELRQKYNVRSMPIRRDDEVQVIRGHFKGNQVGKVVQAYRKKFVVYVEKIQRENANG 92

Query: 330 ATAYVGIHPFKV 365
              YVGIHP KV
Sbjct: 93  TNVYVGIHPSKV 104



 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = +2

Query: 53  MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 154
           MK N  V+SSRRKNRKRHF APSHIRR LMS+PL
Sbjct: 1   MKQNPFVSSSRRKNRKRHFQAPSHIRRRLMSAPL 34



 Score = 37.9 bits (84), Expect = 0.007
 Identities = 17/25 (68%), Positives = 21/25 (84%)
 Frame = +1

Query: 355 PSKCVIVKLKMNXDRKAILXRQSKG 429
           PSK +IVKLK++ DRKAIL R+ KG
Sbjct: 101 PSKVLIVKLKLDKDRKAILERRGKG 125


>BT003208-1|AAO24963.1|  478|Drosophila melanogaster SD23764p
           protein.
          Length = 478

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +3

Query: 207 DDEVQVVRGHYKGQQ-VGKVMQVYRKKFVVY 296
           D  V + RGHY+G   +GK+  V+R  F+ +
Sbjct: 98  DQPVYIGRGHYEGHLIIGKISSVHRALFIAF 128


>AE013599-1621|AAF58436.2|  478|Drosophila melanogaster CG3884-PA,
           isoform A protein.
          Length = 478

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +3

Query: 207 DDEVQVVRGHYKGQQ-VGKVMQVYRKKFVVY 296
           D  V + RGHY+G   +GK+  V+R  F+ +
Sbjct: 98  DQPVYIGRGHYEGHLIIGKISSVHRALFIAF 128


>BT022707-1|AAY55123.1| 1316|Drosophila melanogaster RH74732p protein.
          Length = 1316

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -3

Query: 342  HMLLHHWPFLFESSQCIQQTFYDTPASLCQPVD 244
            H+L + WP +FE+S  + Q F D+   L  P D
Sbjct: 1266 HLLNYVWPNIFETSPHLVQAFMDSVDGLGCPWD 1298


>X03431-3|CAB57797.1|  471|Drosophila melanogaster protein (
           Drosophila melanogastertransposable element 297. ).
          Length = 471

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 15/53 (28%), Positives = 27/53 (50%)
 Frame = -1

Query: 326 IGLFSLNPLNVYNKLFTIHLHHFANLLTFVVSTYNLNFIVFANRHGFYIEFLS 168
           +GLF+   LN Y+KL  ++  +  N+ T     YN N ++  +    Y+  +S
Sbjct: 197 LGLFNPKLLN-YDKLENVNSQNILNIKTSTWINYNDNQVLIISHIPIYLSLIS 248


>AE014297-756|AAF54239.3| 1052|Drosophila melanogaster CG31462-PA
           protein.
          Length = 1052

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = +3

Query: 159 KELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKA 323
           KELR+K    +  +R   E  +  G  +GQQ+    Q    K VV ++  Q+E A
Sbjct: 69  KELRRKTGSDAPSVRSRSETDL--GQVRGQQLMPHQQHSEAKVVVVLDSKQKEVA 121


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,329,595
Number of Sequences: 53049
Number of extensions: 380687
Number of successful extensions: 945
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 945
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1539014778
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)