Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_E21
         (461 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    22   2.8  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   2.8  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   3.7  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    22   3.7  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              21   4.9  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    21   6.5  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   8.5  

>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -1

Query: 314 SLNPLNVYNKLF 279
           S+NP+NVY K +
Sbjct: 35  SINPINVYTKAY 46


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -1

Query: 227 YNLNFIVFANRHGFYI 180
           YN +FI++++   FYI
Sbjct: 339 YNTDFIIYSSLSSFYI 354


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 327 HWPFLFESSQCIQQTF 280
           H+P++F  + CI Q+F
Sbjct: 117 HFPYVFGEAFCIIQSF 132


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -3

Query: 387 HLQLDNHTL*RGECRHMLLHHWPFLFESS 301
           H++   HT    +C H LL H P L + S
Sbjct: 324 HIKSPYHTP-EPDCIHELLGHMPLLADPS 351


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 91  KQEEAFQCSFTYKASVDVLS 150
           K  + FQC   YK   D+L+
Sbjct: 115 KISKIFQCFMKYKTITDILN 134


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 3   PFLFRFLAVSFW 38
           PFLF  L V++W
Sbjct: 410 PFLFAVLNVTYW 421


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -1

Query: 449 CQVQPVGPLLWR 414
           CQ+   GP+LW+
Sbjct: 345 CQMDSGGPVLWQ 356


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,376
Number of Sequences: 438
Number of extensions: 2178
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12312900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)