Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_E17
(335 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 117 2e-27
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 117 2e-27
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 117 2e-27
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 117 2e-27
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 117 2e-27
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 75 2e-14
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 73 5e-14
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 66 4e-12
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 51 2e-07
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 51 2e-07
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 43 5e-05
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 41 3e-04
Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical pr... 40 6e-04
AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 38 0.001
AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical ... 38 0.001
U40419-6|AAL02445.2| 408|Caenorhabditis elegans Hypothetical pr... 32 0.089
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 31 0.27
Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical pr... 29 0.63
U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical p... 29 0.63
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 28 1.4
L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical pr... 28 1.4
L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical pr... 28 1.4
U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical pr... 28 1.9
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 27 2.5
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 27 2.5
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 27 2.5
AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical ... 27 3.3
AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical... 27 3.3
U64835-3|AAO25999.1| 338|Caenorhabditis elegans Serpentine rece... 27 4.4
AF047657-6|AAK18946.1| 337|Caenorhabditis elegans Serpentine re... 27 4.4
Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical pr... 26 5.8
Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical p... 26 5.8
Z72503-5|CAI79155.1| 513|Caenorhabditis elegans Hypothetical pr... 26 5.8
Z73896-2|CAA98059.2| 1369|Caenorhabditis elegans Hypothetical pr... 26 7.7
U23521-9|AAC46809.2| 499|Caenorhabditis elegans Hypothetical pr... 26 7.7
U00050-9|AAA50695.2| 1154|Caenorhabditis elegans Hypothetical pr... 26 7.7
AF271389-1|AAF76200.1| 1369|Caenorhabditis elegans MSH-5 protein. 26 7.7
AF070070-1|AAC70065.1| 933|Caenorhabditis elegans MutS homolog ... 26 7.7
AF016679-6|AAB66156.1| 490|Caenorhabditis elegans Hypothetical ... 26 7.7
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 117 bits (282), Expect = 2e-27
Identities = 58/66 (87%), Positives = 60/66 (90%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKPLEDGRTIIRLH 272
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGK LEDGRT+ +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 273 IPKEST 290
I KEST
Sbjct: 61 IQKEST 66
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 117 bits (282), Expect = 2e-27
Identities = 58/66 (87%), Positives = 60/66 (90%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKPLEDGRTIIRLH 272
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGK LEDGRT+ +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 273 IPKEST 290
I KEST
Sbjct: 61 IQKEST 66
Score = 117 bits (282), Expect = 2e-27
Identities = 58/66 (87%), Positives = 60/66 (90%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKPLEDGRTIIRLH 272
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGK LEDGRT+ +
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 273 IPKEST 290
I KEST
Sbjct: 137 IQKEST 142
Score = 117 bits (282), Expect = 2e-27
Identities = 58/66 (87%), Positives = 60/66 (90%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKPLEDGRTIIRLH 272
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGK LEDGRT+ +
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 273 IPKEST 290
I KEST
Sbjct: 213 IQKEST 218
Score = 117 bits (282), Expect = 2e-27
Identities = 58/66 (87%), Positives = 60/66 (90%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKPLEDGRTIIRLH 272
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGK LEDGRT+ +
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 273 IPKEST 290
I KEST
Sbjct: 289 IQKEST 294
Score = 117 bits (282), Expect = 2e-27
Identities = 58/66 (87%), Positives = 60/66 (90%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKPLEDGRTIIRLH 272
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGK LEDGRT+ +
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 273 IPKEST 290
I KEST
Sbjct: 365 IQKEST 370
Score = 115 bits (276), Expect = 1e-26
Identities = 57/66 (86%), Positives = 59/66 (89%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKPLEDGRTIIRLH 272
MQIFVKTL GKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGK LEDGRT+ +
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 273 IPKEST 290
I KEST
Sbjct: 441 IQKEST 446
Score = 95.5 bits (227), Expect = 8e-21
Identities = 46/47 (97%), Positives = 46/47 (97%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAG 233
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAG
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 117 bits (282), Expect = 2e-27
Identities = 58/66 (87%), Positives = 60/66 (90%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKPLEDGRTIIRLH 272
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGK LEDGRT+ +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 273 IPKEST 290
I KEST
Sbjct: 61 IQKEST 66
Score = 117 bits (282), Expect = 2e-27
Identities = 58/66 (87%), Positives = 60/66 (90%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKPLEDGRTIIRLH 272
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGK LEDGRT+ +
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 273 IPKEST 290
I KEST
Sbjct: 137 IQKEST 142
Score = 117 bits (282), Expect = 2e-27
Identities = 58/66 (87%), Positives = 60/66 (90%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKPLEDGRTIIRLH 272
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGK LEDGRT+ +
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 273 IPKEST 290
I KEST
Sbjct: 213 IQKEST 218
Score = 117 bits (282), Expect = 2e-27
Identities = 58/66 (87%), Positives = 60/66 (90%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKPLEDGRTIIRLH 272
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGK LEDGRT+ +
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 273 IPKEST 290
I KEST
Sbjct: 289 IQKEST 294
Score = 117 bits (282), Expect = 2e-27
Identities = 58/66 (87%), Positives = 60/66 (90%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKPLEDGRTIIRLH 272
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGK LEDGRT+ +
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 273 IPKEST 290
I KEST
Sbjct: 365 IQKEST 370
Score = 117 bits (282), Expect = 2e-27
Identities = 58/66 (87%), Positives = 60/66 (90%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKPLEDGRTIIRLH 272
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGK LEDGRT+ +
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 273 IPKEST 290
I KEST
Sbjct: 517 IQKEST 522
Score = 117 bits (282), Expect = 2e-27
Identities = 58/66 (87%), Positives = 60/66 (90%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKPLEDGRTIIRLH 272
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGK LEDGRT+ +
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 273 IPKEST 290
I KEST
Sbjct: 593 IQKEST 598
Score = 117 bits (282), Expect = 2e-27
Identities = 58/66 (87%), Positives = 60/66 (90%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKPLEDGRTIIRLH 272
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGK LEDGRT+ +
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 273 IPKEST 290
I KEST
Sbjct: 669 IQKEST 674
Score = 117 bits (282), Expect = 2e-27
Identities = 58/66 (87%), Positives = 60/66 (90%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKPLEDGRTIIRLH 272
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGK LEDGRT+ +
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 273 IPKEST 290
I KEST
Sbjct: 745 IQKEST 750
Score = 117 bits (282), Expect = 2e-27
Identities = 58/66 (87%), Positives = 60/66 (90%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKPLEDGRTIIRLH 272
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGK LEDGRT+ +
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 273 IPKEST 290
I KEST
Sbjct: 821 IQKEST 826
Score = 115 bits (276), Expect = 1e-26
Identities = 57/66 (86%), Positives = 59/66 (89%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKPLEDGRTIIRLH 272
MQIFVKTL GKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGK LEDGRT+ +
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 273 IPKEST 290
I KEST
Sbjct: 441 IQKEST 446
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 117 bits (282), Expect = 2e-27
Identities = 58/66 (87%), Positives = 60/66 (90%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKPLEDGRTIIRLH 272
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGK LEDGRT+ +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 273 IPKEST 290
I KEST
Sbjct: 61 IQKEST 66
Score = 117 bits (282), Expect = 2e-27
Identities = 58/66 (87%), Positives = 60/66 (90%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKPLEDGRTIIRLH 272
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGK LEDGRT+ +
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 273 IPKEST 290
I KEST
Sbjct: 137 IQKEST 142
Score = 117 bits (282), Expect = 2e-27
Identities = 58/66 (87%), Positives = 60/66 (90%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKPLEDGRTIIRLH 272
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGK LEDGRT+ +
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 273 IPKEST 290
I KEST
Sbjct: 213 IQKEST 218
Score = 117 bits (282), Expect = 2e-27
Identities = 58/66 (87%), Positives = 60/66 (90%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKPLEDGRTIIRLH 272
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGK LEDGRT+ +
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 273 IPKEST 290
I KEST
Sbjct: 289 IQKEST 294
Score = 117 bits (282), Expect = 2e-27
Identities = 58/66 (87%), Positives = 60/66 (90%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKPLEDGRTIIRLH 272
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGK LEDGRT+ +
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 273 IPKEST 290
I KEST
Sbjct: 365 IQKEST 370
Score = 117 bits (282), Expect = 2e-27
Identities = 58/66 (87%), Positives = 60/66 (90%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKPLEDGRTIIRLH 272
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGK LEDGRT+ +
Sbjct: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 273 IPKEST 290
I KEST
Sbjct: 441 IQKEST 446
Score = 117 bits (282), Expect = 2e-27
Identities = 58/66 (87%), Positives = 60/66 (90%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKPLEDGRTIIRLH 272
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGK LEDGRT+ +
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 273 IPKEST 290
I KEST
Sbjct: 517 IQKEST 522
Score = 117 bits (282), Expect = 2e-27
Identities = 58/66 (87%), Positives = 60/66 (90%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKPLEDGRTIIRLH 272
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGK LEDGRT+ +
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 273 IPKEST 290
I KEST
Sbjct: 593 IQKEST 598
Score = 117 bits (282), Expect = 2e-27
Identities = 58/66 (87%), Positives = 60/66 (90%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKPLEDGRTIIRLH 272
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGK LEDGRT+ +
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 273 IPKEST 290
I KEST
Sbjct: 669 IQKEST 674
Score = 117 bits (282), Expect = 2e-27
Identities = 58/66 (87%), Positives = 60/66 (90%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKPLEDGRTIIRLH 272
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGK LEDGRT+ +
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 273 IPKEST 290
I KEST
Sbjct: 745 IQKEST 750
Score = 116 bits (279), Expect = 4e-27
Identities = 57/66 (86%), Positives = 60/66 (90%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKPLEDGRTIIRLH 272
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGK LEDGRT+ +
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 273 IPKEST 290
I K+ST
Sbjct: 821 IQKQST 826
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 117 bits (282), Expect = 2e-27
Identities = 58/66 (87%), Positives = 60/66 (90%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKPLEDGRTIIRLH 272
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG PPDQQRLIFAGK LEDGRT+ +
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 273 IPKEST 290
I KEST
Sbjct: 61 IQKEST 66
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 74.5 bits (175), Expect = 2e-14
Identities = 36/37 (97%), Positives = 36/37 (97%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXP 203
MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG P
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 72.9 bits (171), Expect = 5e-14
Identities = 32/55 (58%), Positives = 42/55 (76%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKPLEDGRT 257
M I VKTLTGK I L++E +D +E +K K+++KEG PP QQRLIFAGK + D +T
Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKT 55
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 66.5 bits (155), Expect = 4e-12
Identities = 30/64 (46%), Positives = 43/64 (67%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKPLEDGRTIIRLH 272
+ + VKTL GKTI + ++ +DT+E +K K+Q+K G PPDQQRLIF LE+ R + +
Sbjct: 161 LTVSVKTLFGKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAYN 220
Query: 273 IPKE 284
I E
Sbjct: 221 IRDE 224
Score = 34.7 bits (76), Expect = 0.017
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +3
Query: 90 TMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG 197
TM + VKT TGKTIT+E +NVK +++DK+G
Sbjct: 58 TMLLSVKTSTGKTITVEAP-----KNVKTEVRDKQG 88
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 51.2 bits (117), Expect = 2e-07
Identities = 24/50 (48%), Positives = 37/50 (74%)
Frame = +3
Query: 99 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKPLED 248
+FVKTL +T+ LEV A++ + ++K KI+ EG P ++QRL +AG+ LED
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED 50
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 51.2 bits (117), Expect = 2e-07
Identities = 24/50 (48%), Positives = 37/50 (74%)
Frame = +3
Query: 99 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKPLED 248
+FVKTL +T+ LEV A++ + ++K KI+ EG P ++QRL +AG+ LED
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED 50
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 43.2 bits (97), Expect = 5e-05
Identities = 20/46 (43%), Positives = 33/46 (71%)
Frame = +3
Query: 99 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGK 236
+FVKTL +T+ LEV A++ + ++K KI+ EG P ++QRL +A +
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 40.7 bits (91), Expect = 3e-04
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = +3
Query: 96 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKPLEDGRTIIRLHI 275
QIFVK L G + ++ DT+ ++K I+ + P L F+GK LED +I +I
Sbjct: 155 QIFVKVL-GVSYAFKIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDYNI 213
Query: 276 PKEST 290
K ST
Sbjct: 214 QKSST 218
>Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical
protein ZK20.3 protein.
Length = 372
Score = 39.5 bits (88), Expect = 6e-04
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Frame = +3
Query: 66 FCEFQKETTMQIFV--KTLTGKTITLEVEASDTIENVKAKIQDKEG--XPPDQQRLIFAG 233
FC F M + V +TLT LE+ TI VKA + ++G P+ Q+LI+ G
Sbjct: 41 FCSFINNQMMVLSVTFRTLTQVNFNLELNEDQTIAEVKALVASEKGDDYAPELQKLIYNG 100
Query: 234 KPLED 248
K L+D
Sbjct: 101 KILDD 105
>AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical
protein F52C6.3 protein.
Length = 197
Score = 38.3 bits (85), Expect = 0.001
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKPLE 245
++I+V+ G+T TL+ ASDT+ +VKAKI +K P+ Q+L+ L+
Sbjct: 103 IRIYVEN-AGRTCTLDTSASDTMASVKAKIWEKLRILPNTQKLLLENWDLD 152
Score = 29.1 bits (62), Expect = 0.83
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 72 EFQKETTMQIFVKTLTGKTITLEV 143
E E + +FVKT TGKTIT+ +
Sbjct: 174 EVSIEKEIDVFVKTYTGKTITISI 197
Score = 28.7 bits (61), Expect = 1.1
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG 197
M + +KT TGK IT+E S VK +++DK+G
Sbjct: 1 MLLSIKTSTGKNITVEAPKS-----VKTEVRDKQG 30
>AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical
protein F14D2.11 protein.
Length = 110
Score = 38.3 bits (85), Expect = 0.001
Identities = 26/65 (40%), Positives = 33/65 (50%)
Frame = +3
Query: 96 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKPLEDGRTIIRLHI 275
Q FV+ L GKT TL V ASDT+E K ++ R+ + GKPL D T +I
Sbjct: 44 QYFVR-LNGKTRTLNVNASDTVEQGKMQLCHN----ARSTRMSYGGKPLSDQITFGEYNI 98
Query: 276 PKEST 290
ST
Sbjct: 99 SNNST 103
>U40419-6|AAL02445.2| 408|Caenorhabditis elegans Hypothetical
protein C27F2.7 protein.
Length = 408
Score = 32.3 bits (70), Expect = 0.089
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -2
Query: 106 TKICMVVSFWNSQKLLKLSQIVGHVVQL 23
T IC ++SF ++Q LL LSQ H+ QL
Sbjct: 133 TDICQIMSFLDAQSLLNLSQTCSHLRQL 160
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 30.7 bits (66), Expect = 0.27
Identities = 19/58 (32%), Positives = 25/58 (43%)
Frame = +3
Query: 117 TGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKPLEDGRTIIRLHIPKEST 290
+G L V SDTI VK I R++ K LED T+ +I + ST
Sbjct: 181 SGNYRNLWVRGSDTIRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQEGST 238
>Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical
protein K08E3.7 protein.
Length = 386
Score = 29.5 bits (63), Expect = 0.63
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +3
Query: 108 KTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKPLEDGRTIIR 266
KT + +TL + + IE++ ++ P D+ ++F GK L TI+R
Sbjct: 13 KTGQRRNLTLNINITGNIEDLTKDVEKLTEIPSDELEVVFCGKKLSKS-TIMR 64
>U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical
protein C16C8.11 protein.
Length = 214
Score = 29.5 bits (63), Expect = 0.63
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +3
Query: 111 TLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKPLEDGRTI 260
++ G+ ++ +++E +K KI+ + G P + L GKPL D + +
Sbjct: 149 SMPGRLFSIGANKMESVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKL 198
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 28.3 bits (60), Expect = 1.4
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +3
Query: 135 LEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKPLEDGRTIIRLHIPKEST 290
L V SDTI +K +I G R K LED T+ +I + ST
Sbjct: 176 LRVCGSDTIRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREGST 227
>L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical
protein ZK688.5b protein.
Length = 1595
Score = 28.3 bits (60), Expect = 1.4
Identities = 15/58 (25%), Positives = 31/58 (53%)
Frame = +3
Query: 87 TTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKPLEDGRTI 260
TT+++ +KTL + T+ + DTI+++ + + QR+I G+ L +T+
Sbjct: 19 TTIRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTV 76
>L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical
protein ZK688.5a protein.
Length = 1620
Score = 28.3 bits (60), Expect = 1.4
Identities = 15/58 (25%), Positives = 31/58 (53%)
Frame = +3
Query: 87 TTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKPLEDGRTI 260
TT+++ +KTL + T+ + DTI+++ + + QR+I G+ L +T+
Sbjct: 19 TTIRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTV 76
>U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical protein
F48E3.3 protein.
Length = 1493
Score = 27.9 bits (59), Expect = 1.9
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +3
Query: 84 ETTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG 197
E +Q+ + + TGK++ + VE + +E D+EG
Sbjct: 1146 EDVLQVVIDSFTGKSVRVRVEKREGMEERNLLSDDEEG 1183
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 27.5 bits (58), Expect = 2.5
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +3
Query: 135 LEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKPLEDGRTIIRLHI 275
L V SDTI ++K +I R++ GK LED ++ +I
Sbjct: 210 LRVCGSDTIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNI 256
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 27.5 bits (58), Expect = 2.5
Identities = 11/45 (24%), Positives = 25/45 (55%)
Frame = +3
Query: 114 LTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKPLED 248
+ G + ++ + + +K +IQD+ G P +Q+L+ G ++D
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKD 628
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 27.5 bits (58), Expect = 2.5
Identities = 11/45 (24%), Positives = 25/45 (55%)
Frame = +3
Query: 114 LTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKPLED 248
+ G + ++ + + +K +IQD+ G P +Q+L+ G ++D
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKD 628
>AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical
protein F54D10.7 protein.
Length = 264
Score = 27.1 bits (57), Expect = 3.3
Identities = 21/70 (30%), Positives = 33/70 (47%)
Frame = +3
Query: 114 LTGKTITLEVEASDTIENVKAKIQDKEGXPPDQQRLIFAGKPLEDGRTIIRLHIPKESTP 293
L G I +E+++ DTI V + G +QRL+ K L+ +T+ I K+ +
Sbjct: 189 LHGSRIPMELDSLDTIYTVGMALLKHGGLALHRQRLMLNDKELQYNQTLEEAGI-KDGSV 247
Query: 294 PFGITSEKWD 323
T EK D
Sbjct: 248 IKQHTDEKCD 257
>AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical
protein F52C6.2 protein.
Length = 110
Score = 27.1 bits (57), Expect = 3.3
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +3
Query: 93 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG 197
M + +KT TGKTIT+E S VK +++ K+G
Sbjct: 1 MLLSIKTSTGKTITVEAPKS-----VKTEVRYKQG 30
>U64835-3|AAO25999.1| 338|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 27 protein.
Length = 338
Score = 26.6 bits (56), Expect = 4.4
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = -1
Query: 215 LLIWRXALFVLNFCFYIFYGVGCFDF*CYGFTSESFYKNLHGGFFLEFTKIIKIITNCRT 36
L +W + NF Y G+ ++ + + S+ + L GG L FT I+T+C+
Sbjct: 167 LFVWPVGIAKTNFQPYKGQGLIMYEH-RFSWAHTSYGRILIGGSTLFFTIFSSIVTSCKL 225
Query: 35 RRATR 21
+ R
Sbjct: 226 SKLGR 230
>AF047657-6|AAK18946.1| 337|Caenorhabditis elegans Serpentine
receptor, class h protein243 protein.
Length = 337
Score = 26.6 bits (56), Expect = 4.4
Identities = 11/39 (28%), Positives = 25/39 (64%)
Frame = -2
Query: 157 VSDASTSNVMVLPVRVFTKICMVVSFWNSQKLLKLSQIV 41
+ ST+ ++++P+ F IC ++ ++++QKL L +V
Sbjct: 247 IQSISTAGIVLVPLTTF--ICFMMFWYHNQKLNNLGYLV 283
>Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical protein
C26C6.1a protein.
Length = 1883
Score = 26.2 bits (55), Expect = 5.8
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 195 GXPPDQQRLIFAGKPLED-GRTIIRLHIPKESTPPFGITSEK 317
G PP QQ+ + D GRT++R +P PP I S +
Sbjct: 1753 GPPPQQQQPQMQPIVVTDVGRTVVRAVVPAFVAPPNQIHSRR 1794
>Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical
protein C26C6.1a protein.
Length = 1883
Score = 26.2 bits (55), Expect = 5.8
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 195 GXPPDQQRLIFAGKPLED-GRTIIRLHIPKESTPPFGITSEK 317
G PP QQ+ + D GRT++R +P PP I S +
Sbjct: 1753 GPPPQQQQPQMQPIVVTDVGRTVVRAVVPAFVAPPNQIHSRR 1794
>Z72503-5|CAI79155.1| 513|Caenorhabditis elegans Hypothetical
protein C26C6.1b protein.
Length = 513
Score = 26.2 bits (55), Expect = 5.8
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 195 GXPPDQQRLIFAGKPLED-GRTIIRLHIPKESTPPFGITSEK 317
G PP QQ+ + D GRT++R +P PP I S +
Sbjct: 383 GPPPQQQQPQMQPIVVTDVGRTVVRAVVPAFVAPPNQIHSRR 424
>Z73896-2|CAA98059.2| 1369|Caenorhabditis elegans Hypothetical
protein F09E8.3 protein.
Length = 1369
Score = 25.8 bits (54), Expect = 7.7
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 79 WNSQKLLKLSQIVGHVVQLGSSFNE 5
WN++ KLS I+G V L S F +
Sbjct: 351 WNAEVTAKLSSILGRVKALNSVFQK 375
>U23521-9|AAC46809.2| 499|Caenorhabditis elegans Hypothetical
protein F41C3.2 protein.
Length = 499
Score = 25.8 bits (54), Expect = 7.7
Identities = 10/32 (31%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +3
Query: 204 PDQQRLIFAG--KPLEDGRTIIRLHIPKESTP 293
P + + + G K +EDG+++ H+ K TP
Sbjct: 238 PSESKFVSKGELKAIEDGKSLEEKHVEKSKTP 269
>U00050-9|AAA50695.2| 1154|Caenorhabditis elegans Hypothetical
protein F09F7.3 protein.
Length = 1154
Score = 25.8 bits (54), Expect = 7.7
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 207 DQQRLIFAGKPLEDGRTIIRLHIP 278
DQ+ ++FAG + +TII H+P
Sbjct: 823 DQEGIVFAGARIMPKQTIINKHMP 846
>AF271389-1|AAF76200.1| 1369|Caenorhabditis elegans MSH-5 protein.
Length = 1369
Score = 25.8 bits (54), Expect = 7.7
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 79 WNSQKLLKLSQIVGHVVQLGSSFNE 5
WN++ KLS I+G V L S F +
Sbjct: 351 WNAEVTAKLSSILGRVKALNSVFQK 375
>AF070070-1|AAC70065.1| 933|Caenorhabditis elegans MutS homolog
protein.
Length = 933
Score = 25.8 bits (54), Expect = 7.7
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 79 WNSQKLLKLSQIVGHVVQLGSSFNE 5
WN++ KLS I+G V L S F +
Sbjct: 351 WNAEVTAKLSSILGRVKALNSVFQK 375
>AF016679-6|AAB66156.1| 490|Caenorhabditis elegans Hypothetical
protein T28C12.1 protein.
Length = 490
Score = 25.8 bits (54), Expect = 7.7
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 203 RXALFVLNFCFYIFYGV 153
R LF+ FCF +F+GV
Sbjct: 379 RVPLFIYLFCFIVFFGV 395
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,207,309
Number of Sequences: 27780
Number of extensions: 136229
Number of successful extensions: 565
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 564
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 418861482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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