Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_E16
(616 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.14c |dsk1||SR protein-specific kinase Dsk1|Schizosacchar... 99 4e-22
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 48 8e-07
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 44 2e-05
SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein k... 39 7e-04
SPAC823.03 |ppk15||serine/threonine protein kinase Ppk15 |Schizo... 38 0.001
SPCC777.14 |prp4||serine/threonine protein kinase Prp4|Schizosac... 32 0.057
SPBC32H8.10 |cdk9||cyclin-dependent protein kinase Cdk9 |Schizos... 31 0.13
SPAC9G1.09 |sid1||PAK-related kinase Sid1|Schizosaccharomyces po... 30 0.23
SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C |Schizosacchar... 29 0.40
SPBC3H7.15 |hhp1||serine/threonine protein kinase Hhp1|Schizosac... 29 0.53
SPCC1259.13 |chk1|rad27|Chk1 protein kinase|Schizosaccharomyces ... 29 0.53
SPAC23C4.12 |hhp2||serine/threonine protein kinase Hhp2 |Schizos... 29 0.71
SPCC645.04 |nse3||Smc5-6 complex non-SMC subunit Nse3 |Schizosac... 29 0.71
SPAC3H1.13 |ppk13||serine/threonine protein kinase Ppk13 |Schizo... 28 1.2
SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein homolog|Schizosacch... 28 1.2
SPAC6G9.04 |mug79||meiotically upregulated gene Mug79|Schizosacc... 27 1.6
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 27 1.6
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 27 1.6
SPAC18B11.06 |||U3 snoRNP-associated protein Lcp5 |Schizosacchar... 27 2.2
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 27 2.2
SPBC8D2.19 |mde3||serine/threonine protein kinase Mde3|Schizosac... 27 2.8
SPCC790.02 |pep3|vps18, vps18|ubiquitin-protein ligase E3 |Schiz... 27 2.8
SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|... 27 2.8
SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces pomb... 26 3.8
SPAC12G12.05c |taf9||transcription initiation factor Taf9|Schizo... 26 3.8
SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces pom... 26 3.8
SPAC2C4.14c |ppk11||PAK-related kinase Ppk11|Schizosaccharomyces... 26 3.8
SPAC13F5.02c |ptr6|taf7|transcription factor TFIID complex subun... 26 3.8
SPAC24B11.11c |sid2||Sid2p-Mob1p kinase complex|Schizosaccharomy... 26 5.0
SPBC3H7.03c |||2-oxoglutarate dehydrogenase |Schizosaccharomyces... 26 5.0
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 25 6.6
SPAC3C7.06c |pit1||serine/threonine protein kinase Pit1|Schizosa... 25 6.6
SPCC364.06 |nap1||nucleosome assembly protein Nap1 |Schizosaccha... 25 6.6
SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr 1|... 25 8.7
SPBC19C2.08 |prp38||U4/U6 x U5 tri-snRNP complex subunit Prp38 |... 25 8.7
SPCC417.06c |ppk35|mug27|serine/threonine protein kinase Ppk35|S... 25 8.7
SPBC17D11.01 |nep1||nedd8 protease Nep1|Schizosaccharomyces pomb... 25 8.7
SPCC777.13 |vps35||retromer complex subunit Vps35|Schizosaccharo... 25 8.7
>SPBC530.14c |dsk1||SR protein-specific kinase
Dsk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 99.1 bits (236), Expect = 4e-22
Identities = 46/77 (59%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Frame = +2
Query: 338 QEDSADYCKGGYHPVKIGDLFLNR-YHVTRKLGWGHFSTVWLCWDLVDKRFVALKVVKSA 514
+E++ DY GGYHPV IG+ F +R Y V RKLGWGHFSTVWL +D KR VALKVV+SA
Sbjct: 56 EENAEDYHYGGYHPVYIGEEFHHRRYVVERKLGWGHFSTVWLAYDRAAKRRVALKVVRSA 115
Query: 515 PHFTETALDEIKIXRAV 565
H+ ET++DEI+I + +
Sbjct: 116 EHYRETSIDEIRILQKI 132
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 48.4 bits (110), Expect = 8e-07
Identities = 23/66 (34%), Positives = 36/66 (54%)
Frame = +2
Query: 368 GYHPVKIGDLFLNRYHVTRKLGWGHFSTVWLCWDLVDKRFVALKVVKSAPHFTETALDEI 547
G++ V F NRY V R LG G F V C+D R A+KV ++ P + E +L E+
Sbjct: 348 GHYKVVPNSKFANRYTVVRLLGHGTFGKVIQCYDQSTGRHCAIKVTRAIPKYREASLIEL 407
Query: 548 KIXRAV 565
++ + +
Sbjct: 408 RVLQTI 413
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 44.0 bits (99), Expect = 2e-05
Identities = 26/86 (30%), Positives = 42/86 (48%)
Frame = +2
Query: 308 DEQYTSDDEEQEDSADYCKGGYHPVKIGDLFLNRYHVTRKLGWGHFSTVWLCWDLVDKRF 487
D++ ++D+ + + G + V +GD RY V LG G F V C D +
Sbjct: 665 DKRRSADENTSSNFGFDDERGDYKVVLGDHIAYRYEVVDFLGKGSFGQVLRCIDYETGKL 724
Query: 488 VALKVVKSAPHFTETALDEIKIXRAV 565
VALK++++ F AL E KI + +
Sbjct: 725 VALKIIRNKKRFHMQALVETKILQKI 750
>SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein
kinase Ppk5 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 836
Score = 38.7 bits (86), Expect = 7e-04
Identities = 26/77 (33%), Positives = 36/77 (46%)
Frame = +2
Query: 329 DEEQEDSADYCKGGYHPVKIGDLFLNRYHVTRKLGWGHFSTVWLCWDLVDKRFVALKVVK 508
DE E D G Y ++ GD L RY + +G G F V C D + VA+KV+K
Sbjct: 492 DECNEALFDDDNGDYKAIQ-GDHLLYRYEIIDTVGKGSFGQVLKCIDHKRGQVVAIKVIK 550
Query: 509 SAPHFTETALDEIKIXR 559
+ F L E+ I +
Sbjct: 551 NRQKFHGQTLVEVGILK 567
>SPAC823.03 |ppk15||serine/threonine protein kinase Ppk15
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 534
Score = 37.9 bits (84), Expect = 0.001
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = +2
Query: 407 RYHVTRKLGWGHFSTVWLCWDLVDKRFVALKVVKSAPHFTETALDEIKIXRAVXXXXXXX 586
+Y + LG G F V C DL ++ VA+KV+K+ P F + E+ I +
Sbjct: 129 KYLILDTLGHGTFGQVARCQDLKTQQIVAIKVIKNKPAFYNQCVMEVSILELLNNKYDPE 188
Query: 587 XKRN 598
KR+
Sbjct: 189 DKRH 192
>SPCC777.14 |prp4||serine/threonine protein kinase
Prp4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 477
Score = 32.3 bits (70), Expect = 0.057
Identities = 22/73 (30%), Positives = 37/73 (50%)
Frame = +2
Query: 335 EQEDSADYCKGGYHPVKIGDLFLNRYHVTRKLGWGHFSTVWLCWDLVDKRFVALKVVKSA 514
+ +D+ D +G Y V + +L +RY V LG G FSTV D + A+K++++
Sbjct: 135 DMQDNWDDIEGYYKVVLMEELD-SRYIVQSNLGKGMFSTVVSALDRNRNQTFAIKIIRNN 193
Query: 515 PHFTETALDEIKI 553
+ L E+ I
Sbjct: 194 EVMYKEGLKEVSI 206
>SPBC32H8.10 |cdk9||cyclin-dependent protein kinase Cdk9
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 591
Score = 31.1 bits (67), Expect = 0.13
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +2
Query: 386 IGDLFLNRYHVTRKLGWGHFSTVWLCWDLVDKRFVALKVV---KSAPHFTETALDEIKIX 556
+G L YH+ KLG G F V+ D + ALK + F TA+ EIKI
Sbjct: 28 VGCSHLTDYHLMEKLGEGTFGEVYKSQRRKDGKVYALKRILMHTEKEGFPITAIREIKIL 87
Query: 557 RAV 565
+++
Sbjct: 88 KSI 90
>SPAC9G1.09 |sid1||PAK-related kinase Sid1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 471
Score = 30.3 bits (65), Expect = 0.23
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +2
Query: 404 NRYHVTRKLGWGHFSTVWLCWDLVDKRFVALKVVKSAPHFTETALDEI 547
N Y + RKLG G F VW + V +A+K + ET +D+I
Sbjct: 7 NSYTLLRKLGSGSFGVVWKARENVSGDIIAIKQID-----LETGIDDI 49
>SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 988
Score = 29.5 bits (63), Expect = 0.40
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +2
Query: 428 LGWGHFSTVWLCWDLVDKRFVALKVVKSAPHFTETALDEIKIXRAV 565
LG G+F V L V+K+F A+KV+K L+ +K + V
Sbjct: 670 LGKGNFGKVMLAEYKVNKKFYAIKVLKKEAILKNEELESLKTEKHV 715
>SPBC3H7.15 |hhp1||serine/threonine protein kinase
Hhp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 365
Score = 29.1 bits (62), Expect = 0.53
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +2
Query: 404 NRYHVTRKLGWGHFSTVWLCWDLVDKRFVALKV 502
N+Y + RK+G G F ++L ++V VA+K+
Sbjct: 9 NKYRIGRKIGSGSFGDIYLGTNVVSGEEVAIKL 41
>SPCC1259.13 |chk1|rad27|Chk1 protein kinase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 496
Score = 29.1 bits (62), Expect = 0.53
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +2
Query: 410 YHVTRKLGWGHFSTVWLCWD 469
YH+ R++G G F++V LC+D
Sbjct: 10 YHIGREIGTGAFASVRLCYD 29
>SPAC23C4.12 |hhp2||serine/threonine protein kinase Hhp2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 400
Score = 28.7 bits (61), Expect = 0.71
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +2
Query: 380 VKIGDLFLNRYHVTRKLGWGHFSTVWLCWDLVDKRFVALKV 502
+KIG N+Y + RK+G G F ++L + V+ VA+K+
Sbjct: 6 IKIG----NKYRIGRKIGSGSFGQIYLGLNTVNGEQVAVKL 42
>SPCC645.04 |nse3||Smc5-6 complex non-SMC subunit Nse3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 328
Score = 28.7 bits (61), Expect = 0.71
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -1
Query: 607 YGFVSLRIGGIAVSHCSXYFNFVQSRLRKM 518
YGF+ I IAVSHCS + +QS L+++
Sbjct: 210 YGFLMTVIAFIAVSHCSVGHSELQSFLQEL 239
>SPAC3H1.13 |ppk13||serine/threonine protein kinase Ppk13
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 344
Score = 27.9 bits (59), Expect = 1.2
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 407 RYHVTRKLGWGHFSTVWLCWDLVDKRFVALKVVK 508
RY + + LG G F+ V+L ++ +++ ALK +K
Sbjct: 31 RYRIQKLLGEGGFAFVYLVQNVSNEKLYALKKIK 64
>SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2609
Score = 27.9 bits (59), Expect = 1.2
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +2
Query: 263 EPTHSSSNETIEEDEDEQYTSDDEEQEDSADYCKGGYHPVKIGDLFLNRYHVTRKLG 433
+ S SN ++E++ED D ++ED D + ++ GD + Y+V+R G
Sbjct: 1701 DAARSDSNNSMEDEED------DVDEEDKEDKNRTVMRSIESGDSIQDVYNVSRIFG 1751
>SPAC6G9.04 |mug79||meiotically upregulated gene
Mug79|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1318
Score = 27.5 bits (58), Expect = 1.6
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -1
Query: 181 NFVSFFLRLYGEYSSIYIRFRTH 113
NF +F L EY ++Y++F +H
Sbjct: 756 NFTDWFASLGSEYENVYVKFISH 778
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 27.5 bits (58), Expect = 1.6
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Frame = +2
Query: 275 SSSNETIEEDED--EQYTSDDEEQEDSAD 355
SS +E+ E DED E+ DD+E D D
Sbjct: 238 SSGSESYERDEDVDEEEEEDDDENNDEGD 266
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 27.5 bits (58), Expect = 1.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 263 EPTHSSSNETIEEDEDEQYTSDDEEQEDSA 352
E ++ EE+EDE+ +DEE ED +
Sbjct: 101 EENEEEADANEEEEEDEEDDEEDEEDEDES 130
Score = 25.8 bits (54), Expect = 5.0
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 275 SSSNETIEEDEDEQYTSDDEEQEDSADYCKGG 370
+ +NE EEDE+ DDEE E+ D GG
Sbjct: 107 ADANEEEEEDEE-----DDEEDEEDEDESGGG 133
>SPAC18B11.06 |||U3 snoRNP-associated protein Lcp5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 327
Score = 27.1 bits (57), Expect = 2.2
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +2
Query: 275 SSSNETIEEDEDEQYTSDDEEQEDSADYCKGGYHPVKIGDLFLNRYHVTR 424
+S N ++ED+ +S+DEE E+ G Y P +I + ++ TR
Sbjct: 138 ASENNVVKEDDKSSISSEDEE-EELRSAKDGIYRPPRIRAVTMDSEKRTR 186
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 27.1 bits (57), Expect = 2.2
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +2
Query: 269 THSSSNETI--EEDEDEQYTSDDEEQEDSADYCKGG 370
T+ S E + EED+ E S+DEE ++S D + G
Sbjct: 341 TYDSEAEWVADEEDDGEDLESEDEEVDNSDDIVEDG 376
>SPBC8D2.19 |mde3||serine/threonine protein kinase
Mde3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 559
Score = 26.6 bits (56), Expect = 2.8
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 395 LFLNRYHVTRKLGWGHFSTVWL 460
+F +RY V +KLG G F TV+L
Sbjct: 16 IFEDRYLVKQKLGDGSFGTVYL 37
>SPCC790.02 |pep3|vps18, vps18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 900
Score = 26.6 bits (56), Expect = 2.8
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +2
Query: 272 HSSSNETIEEDEDEQYTSDDEEQE 343
+SS + I+ED + +YT+D+ E+E
Sbjct: 11 NSSEDSDIQEDAELEYTADNPEKE 34
>SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 732
Score = 26.6 bits (56), Expect = 2.8
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = -1
Query: 277 TMRWF*TILVL-VTQTVSLANS-PVFFLAIFLFTNFVSFFLRLYGEYSSIYIRFRTHLVV 104
T+ WF I +T + N+ + F IF FVSF + G YS + F+ V+
Sbjct: 53 TLGWFSVICAFSITGSGLEVNTMSIPFYLIFGIFAFVSFTTQYLGIYSFSFQPFQLLNVI 112
Query: 103 IISLSPI 83
I SLS +
Sbjct: 113 IASLSMV 119
>SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 394
Score = 26.2 bits (55), Expect = 3.8
Identities = 8/18 (44%), Positives = 17/18 (94%)
Frame = +2
Query: 296 EEDEDEQYTSDDEEQEDS 349
+++EDE+ ++D+E++EDS
Sbjct: 232 DDEEDEEGSADEEDEEDS 249
>SPAC12G12.05c |taf9||transcription initiation factor
Taf9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 163
Score = 26.2 bits (55), Expect = 3.8
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 263 EPTHSSSNETIEEDEDEQYTSDDEEQEDSADY 358
+P SNET + E+ +SD +ED D+
Sbjct: 127 QPNWIVSNETQQNQPKEENSSDSRMEEDKLDF 158
>SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 649
Score = 26.2 bits (55), Expect = 3.8
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +2
Query: 275 SSSNETIEED--EDEQYTSDDEEQEDSADYCKGGYHPVKIGDLFLN 406
+S ET EE+ E+E ++EE+E+ +Y K+GDL L+
Sbjct: 346 TSRIETQEEEIKEEEMEGEEEEEEEEVPNYESENELEDKVGDLSLS 391
>SPAC2C4.14c |ppk11||PAK-related kinase Ppk11|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 312
Score = 26.2 bits (55), Expect = 3.8
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 404 NRYHVTRKLGWGHFSTVWLCWDLVDKRFVALKVV 505
++Y + +G G F +V+ D+ + VALKVV
Sbjct: 4 HQYRDLQLIGQGSFGSVFRAQDVESSKIVALKVV 37
>SPAC13F5.02c |ptr6|taf7|transcription factor TFIID complex subunit
Taf7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 393
Score = 26.2 bits (55), Expect = 3.8
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 263 EPTHSSSNETIEEDEDEQYTSDDEEQED 346
E + S E EE+E+E+ +DDE +E+
Sbjct: 306 EESASEEEEEEEEEEEEENEADDETREN 333
>SPAC24B11.11c |sid2||Sid2p-Mob1p kinase complex|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 607
Score = 25.8 bits (54), Expect = 5.0
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 410 YHVTRKLGWGHFSTVWLCWDLVDKRFVALKVV-KSAPHFTETALDEIK 550
+ ++G G + +VWL K VALK++ KS H +DEI+
Sbjct: 208 FQTITQVGQGGYGSVWLARKRDTKEIVALKIMNKSVLH----KMDEIR 251
>SPBC3H7.03c |||2-oxoglutarate dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1009
Score = 25.8 bits (54), Expect = 5.0
Identities = 11/41 (26%), Positives = 18/41 (43%)
Frame = -3
Query: 350 HYPPAPRRRWCIAHLRLPQLFRWKNYALVLDDSGSGYADRF 228
H R W ++HL P FR+ + ++ +AD F
Sbjct: 217 HISSRKRSNWILSHLETPTPFRYSHDQKIMIFDRLSWADSF 257
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 25.4 bits (53), Expect = 6.6
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 275 SSSNETIEEDEDEQYTSDDEEQEDSAD 355
SSSN + ED+ +SD E + S D
Sbjct: 272 SSSNSSDSEDDSSSDSSDSESESSSED 298
>SPAC3C7.06c |pit1||serine/threonine protein kinase
Pit1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 650
Score = 25.4 bits (53), Expect = 6.6
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 410 YHVTRKLGWGHFSTVWLCWDLV-DKRFVALKVVK 508
Y+V RK+G G F +V+L K VA+K +K
Sbjct: 36 YNVVRKVGDGTFGSVYLATTKTPSKEVVAIKSMK 69
>SPCC364.06 |nap1||nucleosome assembly protein Nap1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 393
Score = 25.4 bits (53), Expect = 6.6
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 281 SNETIEEDEDEQYTSDDEEQEDS 349
S+ +EEDED+ +S +EE DS
Sbjct: 348 SDLDVEEDEDDVESSSNEEVSDS 370
>SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1402
Score = 25.0 bits (52), Expect = 8.7
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -3
Query: 170 FFSSPVWRVLFYLHQI*NSFSSYYI 96
F+ S VW + +QI N+F + Y+
Sbjct: 1074 FYKSVVWTFTLFWYQIYNNFDANYL 1098
>SPBC19C2.08 |prp38||U4/U6 x U5 tri-snRNP complex subunit Prp38
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 210
Score = 25.0 bits (52), Expect = 8.7
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 263 EPTHSSSNETIEEDEDEQYTSDDEEQEDSAD 355
EP SSS+E ED+DE+ S E E + D
Sbjct: 180 EPLSSSSDE---EDDDEEQISKLESNEGAVD 207
>SPCC417.06c |ppk35|mug27|serine/threonine protein kinase
Ppk35|Schizosaccharomyces pombe|chr 3|||Manual
Length = 624
Score = 25.0 bits (52), Expect = 8.7
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 425 KLGWGHFSTVWLCWDLVDKRFVALKVVKSAPHFTETALDEIK 550
KLG G + +VWL +A+K++K + T L+E+K
Sbjct: 167 KLGQGGYGSVWLAKKRNTHELLAMKMMKKS---TLQQLNEVK 205
>SPBC17D11.01 |nep1||nedd8 protease Nep1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 420
Score = 25.0 bits (52), Expect = 8.7
Identities = 10/38 (26%), Positives = 17/38 (44%)
Frame = +2
Query: 263 EPTHSSSNETIEEDEDEQYTSDDEEQEDSADYCKGGYH 376
E +H SSN +++ + T+ E D G+H
Sbjct: 263 ETSHESSNSNLKKSSESGSTNHHNNHESDKDLHHEGHH 300
>SPCC777.13 |vps35||retromer complex subunit
Vps35|Schizosaccharomyces pombe|chr 3|||Manual
Length = 785
Score = 25.0 bits (52), Expect = 8.7
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 332 EEQEDSADYCKGGYHPVKIGDLFLNRYHVTR 424
E D D C+G HP++ LFL Y +T+
Sbjct: 77 EIMNDLLDMCRGVQHPLR--GLFLRHYLLTQ 105
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,236,831
Number of Sequences: 5004
Number of extensions: 44452
Number of successful extensions: 286
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 266
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 269634532
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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