Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_E10
(426 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99716-3|CAI41690.1| 184|Homo sapiens protein ( ry element bind... 31 1.2
EF064710-1|ABK41893.1| 184|Homo sapiens tumor necrosis factor r... 31 1.2
BC112030-1|AAI12031.1| 184|Homo sapiens BAFF receptor protein. 31 1.2
BC105123-1|AAI05124.1| 184|Homo sapiens BAFF receptor protein. 31 1.2
AF373846-1|AAK91826.1| 184|Homo sapiens BAFF receptor protein. 31 1.2
AB222990-1|BAE16554.1| 184|Homo sapiens BAFF-R protein. 31 1.2
Y07848-2|CAA69176.1| 329|Homo sapiens GAR22 protein protein. 31 1.6
AB046843-1|BAB13449.2| 1236|Homo sapiens KIAA1623 protein protein. 29 6.6
L19711-1|AAA81779.1| 895|Homo sapiens dystroglycan protein. 29 8.7
BC014616-1|AAH14616.1| 895|Homo sapiens dystroglycan 1 (dystrop... 29 8.7
BC012740-1|AAH12740.1| 895|Homo sapiens dystroglycan 1 (dystrop... 29 8.7
>Z99716-3|CAI41690.1| 184|Homo sapiens protein ( ry element binding
transcription factosterol regulatory element binding
transcription factor 2).).
Length = 184
Score = 31.5 bits (68), Expect = 1.2
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3
Query: 39 HCAACGPGLTKHPKPGHASYTGTKNPVQPE 128
HC ACG T PKP AS + +QP+
Sbjct: 31 HCVACGLLRTPRPKPAGASSPAPRTALQPQ 60
>EF064710-1|ABK41893.1| 184|Homo sapiens tumor necrosis factor
receptor superfamily, member 13C protein.
Length = 184
Score = 31.5 bits (68), Expect = 1.2
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3
Query: 39 HCAACGPGLTKHPKPGHASYTGTKNPVQPE 128
HC ACG T PKP AS + +QP+
Sbjct: 31 HCVACGLLRTPRPKPAGASSPAPRTALQPQ 60
>BC112030-1|AAI12031.1| 184|Homo sapiens BAFF receptor protein.
Length = 184
Score = 31.5 bits (68), Expect = 1.2
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3
Query: 39 HCAACGPGLTKHPKPGHASYTGTKNPVQPE 128
HC ACG T PKP AS + +QP+
Sbjct: 31 HCVACGLLRTPRPKPAGASSPAPRTALQPQ 60
>BC105123-1|AAI05124.1| 184|Homo sapiens BAFF receptor protein.
Length = 184
Score = 31.5 bits (68), Expect = 1.2
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3
Query: 39 HCAACGPGLTKHPKPGHASYTGTKNPVQPE 128
HC ACG T PKP AS + +QP+
Sbjct: 31 HCVACGLLRTPRPKPAGASSPAPRTALQPQ 60
>AF373846-1|AAK91826.1| 184|Homo sapiens BAFF receptor protein.
Length = 184
Score = 31.5 bits (68), Expect = 1.2
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3
Query: 39 HCAACGPGLTKHPKPGHASYTGTKNPVQPE 128
HC ACG T PKP AS + +QP+
Sbjct: 31 HCVACGLLRTPRPKPAGASSPAPRTALQPQ 60
>AB222990-1|BAE16554.1| 184|Homo sapiens BAFF-R protein.
Length = 184
Score = 31.5 bits (68), Expect = 1.2
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3
Query: 39 HCAACGPGLTKHPKPGHASYTGTKNPVQPE 128
HC ACG T PKP AS + +QP+
Sbjct: 31 HCVACGLLRTPRPKPAGASSPAPRTALQPQ 60
>Y07848-2|CAA69176.1| 329|Homo sapiens GAR22 protein protein.
Length = 329
Score = 31.1 bits (67), Expect = 1.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 36 CHCAACGPGLTKHPKPGHASYTGTKNPVQP 125
C C++ GPG++ P P A+ GT P P
Sbjct: 274 CRCSSTGPGISCPPIPAPAATPGTVTPQPP 303
>AB046843-1|BAB13449.2| 1236|Homo sapiens KIAA1623 protein protein.
Length = 1236
Score = 29.1 bits (62), Expect = 6.6
Identities = 16/56 (28%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = +3
Query: 3 SXPHRVATPARCH-CAACGPGLTKHPKPGHASYTGTKNPVQPERDRXVRDPGYIPA 167
+ P + A C CA GP P PG AS+ P P + P P+
Sbjct: 1166 AAPRQALAAAECPPCAMAGPPPAPQPLPGDASFYSLPPPPLPPTSDPLETPAPSPS 1221
>L19711-1|AAA81779.1| 895|Homo sapiens dystroglycan protein.
Length = 895
Score = 28.7 bits (61), Expect = 8.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 4 PDRTGSPRRRAATVPPADPDSLSTLNLVTHPTLVPRT 114
P T + + R +T PA P + ST PT PRT
Sbjct: 419 PPTTTTKKPRVSTPKPATPSTDSTTTTTRRPTKKPRT 455
>BC014616-1|AAH14616.1| 895|Homo sapiens dystroglycan 1
(dystrophin-associated glycoprotein 1) protein.
Length = 895
Score = 28.7 bits (61), Expect = 8.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 4 PDRTGSPRRRAATVPPADPDSLSTLNLVTHPTLVPRT 114
P T + + R +T PA P + ST PT PRT
Sbjct: 419 PPTTTTKKPRVSTPKPATPSTDSTTTTTRRPTKKPRT 455
>BC012740-1|AAH12740.1| 895|Homo sapiens dystroglycan 1
(dystrophin-associated glycoprotein 1) protein.
Length = 895
Score = 28.7 bits (61), Expect = 8.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 4 PDRTGSPRRRAATVPPADPDSLSTLNLVTHPTLVPRT 114
P T + + R +T PA P + ST PT PRT
Sbjct: 419 PPTTTTKKPRVSTPKPATPSTDSTTTTTRRPTKKPRT 455
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,924,190
Number of Sequences: 237096
Number of extensions: 1347556
Number of successful extensions: 3414
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3412
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3316445452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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