Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_E10
         (426 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81132-8|CAB03429.1|   90|Caenorhabditis elegans Hypothetical pr...    28   2.4  
Z81132-7|CAB03428.1|   86|Caenorhabditis elegans Hypothetical pr...    28   2.4  
Z78059-1|CAH04725.2|  348|Caenorhabditis elegans Hypothetical pr...    28   3.2  
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr...    27   5.6  
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr...    27   5.6  
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr...    27   5.6  
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr...    27   5.6  
Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical pr...    27   5.6  
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr...    27   5.6  
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr...    27   5.6  
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr...    27   5.6  
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr...    27   5.6  
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra...    27   5.6  
AL132948-20|CAD31821.1|  391|Caenorhabditis elegans Hypothetical...    27   5.6  
AL032623-6|CAA21513.1|  198|Caenorhabditis elegans Hypothetical ...    27   5.6  
Z81528-1|CAB04282.1|  345|Caenorhabditis elegans Hypothetical pr...    26   9.8  
AF099925-3|AAC69507.1|  394|Caenorhabditis elegans Collagen prot...    26   9.8  

>Z81132-8|CAB03429.1|   90|Caenorhabditis elegans Hypothetical
           protein T26E4.10 protein.
          Length = 90

 Score = 28.3 bits (60), Expect = 2.4
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +3

Query: 9   PHRVATPARCHCAACGPGLTK 71
           P   ATPA C+C  CG G  K
Sbjct: 70  PDPAATPAPCNCGCCGCGWGK 90


>Z81132-7|CAB03428.1|   86|Caenorhabditis elegans Hypothetical
           protein T26E4.9 protein.
          Length = 86

 Score = 28.3 bits (60), Expect = 2.4
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +3

Query: 9   PHRVATPARCHCAACGPGLTK 71
           P   ATPA C+C  CG G  K
Sbjct: 66  PDPAATPAPCNCGCCGCGWGK 86


>Z78059-1|CAH04725.2|  348|Caenorhabditis elegans Hypothetical
           protein C34B4.5 protein.
          Length = 348

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -1

Query: 366 NKTLFHLMKKYFEHFYIIKCINILMLPGVFFKTTTILYF 250
           NKT   ++K+ F  F + +  NI++L G   K TT+  F
Sbjct: 253 NKTEIIILKQAFFIFLMFQIYNIIVLYGKTLKMTTVTAF 291


>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical
           protein ZC101.2f protein.
          Length = 2389

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = +3

Query: 42  CAACGPGLTKHPKPGHASYTGTKNPVQPERDRXVRDPGYIPALRGKRGE 188
           C  C PG   + + G+  Y GT  P+QP   +    PG +      +G+
Sbjct: 645 CEDCAPG---YERSGYGPYLGTCVPIQPRHQQC--GPGAVAPTAPAQGQ 688


>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical
           protein ZC101.2e protein.
          Length = 3375

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = +3

Query: 42  CAACGPGLTKHPKPGHASYTGTKNPVQPERDRXVRDPGYIPALRGKRGE 188
           C  C PG   + + G+  Y GT  P+QP   +    PG +      +G+
Sbjct: 645 CEDCAPG---YERSGYGPYLGTCVPIQPRHQQC--GPGAVAPTAPAQGQ 688


>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical
           protein ZC101.2c protein.
          Length = 2295

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = +3

Query: 42  CAACGPGLTKHPKPGHASYTGTKNPVQPERDRXVRDPGYIPALRGKRGE 188
           C  C PG   + + G+  Y GT  P+QP   +    PG +      +G+
Sbjct: 645 CEDCAPG---YERSGYGPYLGTCVPIQPRHQQC--GPGAVAPTAPAQGQ 688


>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical
           protein ZC101.2a protein.
          Length = 2482

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = +3

Query: 42  CAACGPGLTKHPKPGHASYTGTKNPVQPERDRXVRDPGYIPALRGKRGE 188
           C  C PG   + + G+  Y GT  P+QP   +    PG +      +G+
Sbjct: 645 CEDCAPG---YERSGYGPYLGTCVPIQPRHQQC--GPGAVAPTAPAQGQ 688


>Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical
           protein ZC101.2b protein.
          Length = 1160

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = +3

Query: 42  CAACGPGLTKHPKPGHASYTGTKNPVQPERDRXVRDPGYIPALRGKRGE 188
           C  C PG   + + G+  Y GT  P+QP   +    PG +      +G+
Sbjct: 645 CEDCAPG---YERSGYGPYLGTCVPIQPRHQQC--GPGAVAPTAPAQGQ 688


>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical
           protein ZC101.2f protein.
          Length = 2389

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = +3

Query: 42  CAACGPGLTKHPKPGHASYTGTKNPVQPERDRXVRDPGYIPALRGKRGE 188
           C  C PG   + + G+  Y GT  P+QP   +    PG +      +G+
Sbjct: 645 CEDCAPG---YERSGYGPYLGTCVPIQPRHQQC--GPGAVAPTAPAQGQ 688


>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical
           protein ZC101.2e protein.
          Length = 3375

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = +3

Query: 42  CAACGPGLTKHPKPGHASYTGTKNPVQPERDRXVRDPGYIPALRGKRGE 188
           C  C PG   + + G+  Y GT  P+QP   +    PG +      +G+
Sbjct: 645 CEDCAPG---YERSGYGPYLGTCVPIQPRHQQC--GPGAVAPTAPAQGQ 688


>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical
           protein ZC101.2c protein.
          Length = 2295

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = +3

Query: 42  CAACGPGLTKHPKPGHASYTGTKNPVQPERDRXVRDPGYIPALRGKRGE 188
           C  C PG   + + G+  Y GT  P+QP   +    PG +      +G+
Sbjct: 645 CEDCAPG---YERSGYGPYLGTCVPIQPRHQQC--GPGAVAPTAPAQGQ 688


>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical
           protein ZC101.2a protein.
          Length = 2482

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = +3

Query: 42  CAACGPGLTKHPKPGHASYTGTKNPVQPERDRXVRDPGYIPALRGKRGE 188
           C  C PG   + + G+  Y GT  P+QP   +    PG +      +G+
Sbjct: 645 CEDCAPG---YERSGYGPYLGTCVPIQPRHQQC--GPGAVAPTAPAQGQ 688


>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
           proteoglycan protein.
          Length = 2481

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = +3

Query: 42  CAACGPGLTKHPKPGHASYTGTKNPVQPERDRXVRDPGYIPALRGKRGE 188
           C  C PG   + + G+  Y GT  P+QP   +    PG +      +G+
Sbjct: 644 CEDCAPG---YERSGYGPYLGTCVPIQPRHQQC--GPGAVAPTAPAQGQ 687


>AL132948-20|CAD31821.1|  391|Caenorhabditis elegans Hypothetical
           protein Y39B6A.24 protein.
          Length = 391

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 13/41 (31%), Positives = 26/41 (63%), Gaps = 6/41 (14%)
 Frame = -2

Query: 155 SGITYXPVPLRLYWVL---GTSVGCVTRF---RVLSESGSA 51
           +G+TY P+  + YW     G +VG  +++   +V+S++GS+
Sbjct: 238 AGVTYVPLTAKTYWQFKMDGFAVGTYSQYGYNQVISDTGSS 278


>AL032623-6|CAA21513.1|  198|Caenorhabditis elegans Hypothetical
           protein Y43F8B.5 protein.
          Length = 198

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -2

Query: 170 KRWNISGITYXPVPLRLYWVLGTSVGC 90
           K WN+       + ++L W   +SVGC
Sbjct: 116 KEWNLKSYNSNYIGIQLIWAKSSSVGC 142


>Z81528-1|CAB04282.1|  345|Caenorhabditis elegans Hypothetical
           protein F35E2.1 protein.
          Length = 345

 Score = 26.2 bits (55), Expect = 9.8
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -2

Query: 188 FSSLPPKRWNISGITYXPVPLR 123
           ++SLPP  +N+S +T  P+  R
Sbjct: 20  YNSLPPANYNLSDLTVTPMTFR 41


>AF099925-3|AAC69507.1|  394|Caenorhabditis elegans Collagen protein
           69 protein.
          Length = 394

 Score = 26.2 bits (55), Expect = 9.8
 Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
 Frame = +3

Query: 51  CGP-GLTKHP-KPGHASYTGTKNPVQPERDRXVRDPGYIPALRGKRG 185
           CGP G+   P  PG+ S  G   P  P  +     P   P L+G+ G
Sbjct: 198 CGPSGIPGLPGNPGYTSPPGLPGPPGPCGEAGREGPNGTPGLKGEPG 244


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,478,808
Number of Sequences: 27780
Number of extensions: 186447
Number of successful extensions: 449
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 447
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 703342068
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)