Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_D23
(653 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3A12.03c |mug145||ubiquitin-protein ligase E3 |Schizosacchar... 54 2e-08
SPCC4G3.12c |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 48 1e-06
SPBC15C4.06c ||SPBC21H7.01c|ubiquitin-protein ligase E3 |Schizos... 47 3e-06
SPAC57A7.09 |||human RNF family homolog|Schizosaccharomyces pomb... 45 1e-05
SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 43 4e-05
SPBP4H10.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 40 4e-04
SPAC17G8.10c |dma1||mitotic spindle checkpoint protein Dma1|Schi... 38 0.002
SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces pomb... 37 0.002
SPCC126.07c |||human CTD-binding SR-like protein rA9 homolog|Sch... 34 0.016
SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces pom... 32 0.083
SPBC36B7.05c |||phosphatidylinositol|Schizosaccharomyces pombe|c... 31 0.11
SPAC343.03 |apc11||anaphase-promoting complex subunit Apc11|Schi... 28 1.0
SPAC31G5.09c |spk1||MAP kinase Spk1|Schizosaccharomyces pombe|ch... 27 2.4
SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2 |Schizo... 27 2.4
SPAC1002.14 |itt1||ubiquitin-protein ligase E3 |Schizosaccharomy... 26 4.1
SPBC215.08c |arg4||carbamoyl-phosphate synthase Arg4|Schizosacch... 26 4.1
SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 25 7.2
SPBC1105.07c |||nuclear pore associated protein Thp1-Sac3 comple... 25 7.2
SPAC19A8.04 |erg5||C-22 sterol desaturase Erg5 |Schizosaccharomy... 25 7.2
SPAC23H4.18c |rbx1|pip1, pip1|RING-box protein 1|Schizosaccharom... 25 7.2
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 25 9.5
SPAC17A5.04c |mde10|mug139|spore wall assembly peptidase Mde10|S... 25 9.5
SPBC17D11.02c |||synoviolin homolog|Schizosaccharomyces pombe|ch... 25 9.5
>SPAC3A12.03c |mug145||ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 309
Score = 53.6 bits (123), Expect = 2e-08
Identities = 21/38 (55%), Positives = 24/38 (63%)
Frame = +3
Query: 228 DPYDTCAICLDDYQEGDRLRVLPCAHAYHSACIDPWLT 341
D D C IC DY D LRVLPC H +H+ CID W+T
Sbjct: 200 DEEDFCIICYADYAFDDILRVLPCEHVFHTQCIDTWMT 237
>SPCC4G3.12c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 821
Score = 48.0 bits (109), Expect = 1e-06
Identities = 20/36 (55%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +3
Query: 237 DTCAICLDDYQEGDRLRVLP-CAHAYHSACIDPWLT 341
D+C ICL+ Y GD R L C H +H ACID WLT
Sbjct: 764 DSCLICLETYTNGDICRKLQACKHFFHQACIDQWLT 799
>SPBC15C4.06c ||SPBC21H7.01c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 46.8 bits (106), Expect = 3e-06
Identities = 20/36 (55%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +3
Query: 243 CAICLDDYQEGDRL-RVLPCAHAYHSACIDPWLTQN 347
C ICL +Y E L R LPC H +H ACIDP+L +N
Sbjct: 498 CTICLCEYSEESPLYRELPCHHIFHPACIDPYLLKN 533
>SPAC57A7.09 |||human RNF family homolog|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 372
Score = 44.8 bits (101), Expect = 1e-05
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 243 CAICLDDYQEGDRLRVLPCAHAYHSACIDPWL 338
C ICL+ + +GD++ LPC H +H CI W+
Sbjct: 321 CVICLESFTKGDKVVALPCKHEFHRPCIAKWI 352
>SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 513
Score = 42.7 bits (96), Expect = 4e-05
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 228 DPYDTCAICLDDYQEGDRLRVLPCAHAYHSACIDPWLTQN 347
D C IC++ ++ D + LPC H +H CI PWL N
Sbjct: 391 DEEGECTICMEMFKINDDVIQLPCKHYFHENCIKPWLRVN 430
>SPBP4H10.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 583
Score = 39.5 bits (88), Expect = 4e-04
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +3
Query: 237 DTCAICLDDYQEGDRLRVLP-CAHAYHSACIDPWLTQN 347
+ C +CL +++ D R L C H +H CID WLT +
Sbjct: 523 ERCLVCLSNFELNDECRRLKQCNHFFHRECIDQWLTSS 560
>SPAC17G8.10c |dma1||mitotic spindle checkpoint protein
Dma1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 267
Score = 37.5 bits (83), Expect = 0.002
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +3
Query: 210 CKFSKGDPYDTCAICLDDYQEGDRLRVLPCAHAYHSACIDPWLTQN 347
C S+ P + C ICL L V PC+H+YH CI P L ++
Sbjct: 182 CGSSESGPPE-CCICLMPVLPCQALFVAPCSHSYHYKCIRPTLNES 226
>SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 741
Score = 37.1 bits (82), Expect = 0.002
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = +3
Query: 240 TCAICLDDYQEGDRLRV--LPCAHAYHSACIDPWL 338
TC IC DD E D + +PC H + C+ WL
Sbjct: 106 TCPICYDDMNENDEKQATKMPCGHIFGKNCLQKWL 140
>SPCC126.07c |||human CTD-binding SR-like protein rA9
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 571
Score = 34.3 bits (75), Expect = 0.016
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +3
Query: 195 SKIPTCKFSKGDPYDTCAICLDDYQEGDRLRVLPCAHAYHSACIDPW 335
S +P C + D A + +G R+ +PC H +H+ C++ W
Sbjct: 23 SNLPNCPLDQWDSSSVPA-SISSTLDGLRIAKIPCGHYFHNHCLESW 68
>SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1375
Score = 31.9 bits (69), Expect = 0.083
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 222 KGDPYDTCAICLDDYQEGDRLRVLPCAHAYHSACIDPWL 338
K + + C IC D ++G + C H Y S C++ WL
Sbjct: 1085 KAESHQICIICRDIIKQGF---ITTCGHLYCSFCLEAWL 1120
>SPBC36B7.05c |||phosphatidylinositol|Schizosaccharomyces pombe|chr
2|||Manual
Length = 279
Score = 31.5 bits (68), Expect = 0.11
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +3
Query: 243 CAICLDDYQEGDRL-RVLPCAHAYHSACIDPWLT 341
C IC +++ GDR+ R+ C +H C WL+
Sbjct: 230 CIICFEEFAAGDRVARIEYCLCIFHLKCYRDWLS 263
>SPAC343.03 |apc11||anaphase-promoting complex subunit
Apc11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 94
Score = 28.3 bits (60), Expect = 1.0
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +3
Query: 231 PYDTCAICLDDYQEGDRLRVL--PCAHAYHSACIDPWL 338
P+D C C GD ++ C H +H+ CI WL
Sbjct: 30 PFDGC--CPQCTSPGDNCPIVWGKCKHIFHAHCIQNWL 65
>SPAC31G5.09c |spk1||MAP kinase Spk1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 372
Score = 27.1 bits (57), Expect = 2.4
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -2
Query: 118 MTSRQSTTTIAKGNSRCVLMLNGRSPFTN 32
M S ST TIA GNS + RSP T+
Sbjct: 1 MASATSTPTIADGNSNKESVATSRSPHTH 29
>SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1513
Score = 27.1 bits (57), Expect = 2.4
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 237 DTCAICLDDYQEGDRLRVLPCAHAYHSACIDPWLT 341
+ C C D L C AYH++C+DP LT
Sbjct: 269 EQCEYCGLDKNPETILLCDGCEAAYHTSCLDPPLT 303
>SPAC1002.14 |itt1||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 435
Score = 26.2 bits (55), Expect = 4.1
Identities = 8/33 (24%), Positives = 16/33 (48%)
Frame = +3
Query: 243 CAICLDDYQEGDRLRVLPCAHAYHSACIDPWLT 341
C +C D++ D ++ C H +C+ + T
Sbjct: 174 CNVCFDEFNGTDCFQLTRCGHVSCQSCLRDYYT 206
>SPBC215.08c |arg4||carbamoyl-phosphate synthase
Arg4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1160
Score = 26.2 bits (55), Expect = 4.1
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = -2
Query: 181 GKRCLLALRLSFIHFTIININMTSRQSTTTIA 86
G + + ALR S +H +IN N+ + QS+ ++A
Sbjct: 109 GAQAIKALRESSVHTILINPNIATIQSSHSLA 140
>SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 676
Score = 25.4 bits (53), Expect = 7.2
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +3
Query: 294 PCAHAYHSACIDPWL 338
PC H YH C+ W+
Sbjct: 646 PCHHLYHRQCLLQWM 660
>SPBC1105.07c |||nuclear pore associated protein Thp1-Sac3 complex
subunit |Schizosaccharomyces pombe|chr 2|||Manual
Length = 442
Score = 25.4 bits (53), Expect = 7.2
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +1
Query: 478 TFEEQRENPFVRAARFMSRLRAXNNQNSADAE 573
TFE+ ++ P V + ++ R N NS D +
Sbjct: 351 TFEQSQKTPHVSGSYLLTAARLSTNDNSYDMD 382
>SPAC19A8.04 |erg5||C-22 sterol desaturase Erg5 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 541
Score = 25.4 bits (53), Expect = 7.2
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -1
Query: 608 TFLDYLXVQEGTSASALFWLF 546
TFL +L + ++SA+ WLF
Sbjct: 312 TFLSFLFASQDATSSAMTWLF 332
>SPAC23H4.18c |rbx1|pip1, pip1|RING-box protein
1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 107
Score = 25.4 bits (53), Expect = 7.2
Identities = 10/18 (55%), Positives = 12/18 (66%), Gaps = 1/18 (5%)
Frame = +3
Query: 297 CAHAYHSACIDPWL-TQN 347
C HA+H CI WL T+N
Sbjct: 74 CNHAFHFHCISRWLNTRN 91
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 25.0 bits (52), Expect = 9.5
Identities = 9/32 (28%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Frame = +3
Query: 243 CAICLDDYQEGDRLRVL-PCAHAYHSACIDPW 335
C++C D + C H +H +CI W
Sbjct: 197 CSVCTDTINPSTSIWSCGTCYHVFHLSCIRKW 228
>SPAC17A5.04c |mde10|mug139|spore wall assembly peptidase
Mde10|Schizosaccharomyces pombe|chr 1|||Manual
Length = 512
Score = 25.0 bits (52), Expect = 9.5
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +3
Query: 207 TCKFSKGDPYDTCAICLDDYQEGDRLRVLPCAHAYHSACI 326
+CK S + TC I DY +G R R C Y+ C+
Sbjct: 442 SCKVSCQNEDGTCFISAKDYIDGTRCRGGLC---YNGVCV 478
>SPBC17D11.02c |||synoviolin homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 677
Score = 25.0 bits (52), Expect = 9.5
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +3
Query: 291 LPCAHAYHSACIDPWL 338
LPC H H C+ WL
Sbjct: 326 LPCGHILHFHCLRNWL 341
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,707,406
Number of Sequences: 5004
Number of extensions: 23518
Number of successful extensions: 96
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 94
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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