Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_D20
         (587 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73103-1|CAA97424.1|  117|Caenorhabditis elegans Hypothetical pr...    43   1e-04
U39849-8|AAA81050.1|  479|Caenorhabditis elegans Hypothetical pr...    29   1.9  
U42841-14|AAC48172.3|  469|Caenorhabditis elegans Hypothetical p...    29   2.4  
AC024844-7|AAK29952.3|  461|Caenorhabditis elegans Hypothetical ...    29   3.2  
Z71261-4|CAA95804.1|  126|Caenorhabditis elegans Hypothetical pr...    27   7.5  
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr...    27   7.5  

>Z73103-1|CAA97424.1|  117|Caenorhabditis elegans Hypothetical
           protein C08F8.1 protein.
          Length = 117

 Score = 43.2 bits (97), Expect = 1e-04
 Identities = 30/115 (26%), Positives = 53/115 (46%)
 Frame = +2

Query: 122 DLELKQAFVDLQVLMIETKKTIENIDHQLAVLGRMQMHTNLTQREIDVLPPGTKTYESMA 301
           D E+ +AF DLQ    ET+  I   +    V  +    +  T++ +  L    K Y S+ 
Sbjct: 3   DEEISKAFRDLQFKTNETRMRIVQGEQNKKVNYQKMRISESTKKNLVDLDENLKYYRSVG 62

Query: 302 RMFVQSDLEHIKQNLRQKTNTLISRXDDLNNRKVCLNHTLNESESNIRDLIQPKK 466
           RMF+ +D          +      + + +  +K  L   L E+E+N+R+LIQ ++
Sbjct: 63  RMFLLTDKPAEISRHEAEAKQSKEKIEAIEKQKDYLEKGLVEAETNLRELIQSRR 117


>U39849-8|AAA81050.1|  479|Caenorhabditis elegans Hypothetical
           protein C06A8.5 protein.
          Length = 479

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
 Frame = +2

Query: 317 SDLEHIKQNLRQKTNTLISRXDDLNNR------KVCLNHTLNESESNIRDL 451
           +D+E +K+ LRQK   L    DDL N+      K+ L     E    +RDL
Sbjct: 12  ADVERLKKILRQKDEMLEEMEDDLKNQGKPCSSKLSLEERAQELSEQLRDL 62


>U42841-14|AAC48172.3|  469|Caenorhabditis elegans Hypothetical
           protein T17H7.7 protein.
          Length = 469

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
 Frame = +2

Query: 122 DLELKQAFVDLQVLMIETKKTIENIDHQLAVLGRMQMHTNLTQREIDVL---PPGTKTYE 292
           DLE+ Q F  L +   ETK  +E ++  +      +M T+ T  E+  +   P  T T  
Sbjct: 188 DLEVVQLFKKLNLSKEETKSIVERVEQVVREKLMSKMDTSSTTTEVTTVVTTPSTTTTTT 247

Query: 293 SMARMFVQSDLEHIKQNLRQK 355
           S  +    +  E I++ + ++
Sbjct: 248 STTQAPTTTTKEFIEEEIEEE 268


>AC024844-7|AAK29952.3|  461|Caenorhabditis elegans Hypothetical
           protein Y65B4A.8 protein.
          Length = 461

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +2

Query: 5   GRYPCLRKATRLFVFKIVIGAQDSDFIFXTTIIKMAKTVDLELKQ 139
           G    L KA  L    IV+G  D D I   ++ +M + V+  +K+
Sbjct: 114 GHKVLLNKAAELASDVIVVGVTDKDMIIKKSLFEMIEPVEFRIKK 158


>Z71261-4|CAA95804.1|  126|Caenorhabditis elegans Hypothetical
           protein F21C3.5 protein.
          Length = 126

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 15/64 (23%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
 Frame = +2

Query: 179 KTIENIDHQLAVLGRMQMHTNLTQR-----EIDVLPPGTKTYESMARMFVQSDLEHIKQN 343
           +T+E  D +     R +M   LT+      E+D++   +K Y+ +  + V+ DLE  +  
Sbjct: 15  RTLEK-DREKYFTSRQEMEMRLTESKNVKAELDLMESDSKVYKLIGAVLVRQDLEEARST 73

Query: 344 LRQK 355
           + ++
Sbjct: 74  VEKR 77


>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein
            T28C6.9 protein.
          Length = 1861

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 18/86 (20%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
 Frame = +2

Query: 281  KTYESMARMFVQSDLEHIKQNLRQKTNTLISRXDDLNNRKVCLNHTLNESESNIRDLIQP 460
            +T E    +  +++L+   Q  + +   L+     LNNR + L     E E  ++++ + 
Sbjct: 1216 ETQEEPKELSEKTELDKELQEAKSEIGRLVEIEKVLNNRILSLEDQNLELEERLQEMEEE 1275

Query: 461  KKDE--K*KSASSRIKPNTFKKIDDW 532
              DE  K K   ++++  + +   DW
Sbjct: 1276 LLDEKNKKKEVDAKVEQKSEENWGDW 1301


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,911,336
Number of Sequences: 27780
Number of extensions: 230013
Number of successful extensions: 556
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 555
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)