Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_D18
(577 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1032 - 30259180-30260519,30260650-30260720,30261099-302621... 32 0.38
03_06_0419 - 33789625-33789843,33790884-33791185,33791279-33792248 32 0.38
12_01_0648 + 5496696-5497052 25 0.46
06_03_0336 + 19671500-19672150,19672681-19673301 31 0.87
07_03_0793 + 21552499-21552729 30 1.1
02_05_0059 - 25482207-25482271,25482432-25482651 30 1.1
01_06_1358 - 36637369-36637573,36637643-36638119,36638217-366384... 30 1.1
01_05_0339 + 21135250-21135467,21136465-21137513,21137905-21138962 30 1.1
04_04_0673 - 27168305-27168874,27168977-27169099,27169180-271694... 30 1.5
12_02_1261 + 27410921-27413401 29 2.0
11_06_0257 + 21746643-21748091 29 2.0
04_01_0167 + 1864956-1865495 29 2.0
10_04_0012 + 7555067-7555867 29 2.7
12_02_0992 + 25083397-25083537,25084198-25084228,25084971-250851... 29 3.5
11_03_0183 - 11310671-11313625,11314243-11314287,11314550-11314717 29 3.5
08_02_0386 - 16575636-16575698,16575799-16575858,16575947-165762... 29 3.5
04_03_0801 - 19828175-19828770,19828913-19828994 29 3.5
02_05_0419 - 28814754-28816114,28816749-28817435,28817554-288177... 29 3.5
12_02_0121 + 13919496-13919734,13919821-13919982,13920102-13920534 28 4.6
03_01_0313 - 2476171-2476569 28 4.6
02_01_0574 + 4247469-4248196,4249501-4249691,4250565-4251022 28 4.6
12_02_0927 + 24473634-24474236,24474464-24474518,24474579-24474952 28 6.1
08_01_0935 - 9218271-9219860,9219959-9220232,9220506-9221767 28 6.1
07_01_1139 - 10684647-10685837,10685877-10686251,10686351-106865... 28 6.1
05_03_0466 - 14362190-14362312,14362411-14362658,14363289-14363664 28 6.1
01_04_0138 + 16554175-16554822 28 6.1
01_03_0213 - 13860284-13860299,13860480-13860537,13860678-13861107 28 6.1
06_03_0683 - 23490215-23490997 27 8.1
03_04_0113 + 17382370-17382714 27 8.1
03_02_0431 - 8384259-8384266,8384649-8384787,8385875-8386067,838... 27 8.1
02_02_0299 - 8726024-8726101,8726460-8726534,8726836-8726965,872... 27 8.1
>04_04_1032 -
30259180-30260519,30260650-30260720,30261099-30262118,
30263886-30264121
Length = 888
Score = 31.9 bits (69), Expect = 0.38
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 180 VCTCLCGVLGWARDRNRSWWP 242
+ C G++ W R RN SWWP
Sbjct: 26 ITDCSPGIIVWVRRRNGSWWP 46
>03_06_0419 - 33789625-33789843,33790884-33791185,33791279-33792248
Length = 496
Score = 31.9 bits (69), Expect = 0.38
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = -1
Query: 376 SQVGMGQPVLV-VHRSPLHVTSAVEALVVPRLSHESSARARV*GSAGHHERFRSRAQPK 203
+ VG G P+ VH SPL TS VVP + A+ R +A R R +P+
Sbjct: 129 AMVGSGHPMAAPVHSSPLATTSGSNHAVVPDAPPQEPAKRRRRNTAAAATARRGRGRPR 187
>12_01_0648 + 5496696-5497052
Length = 118
Score = 25.4 bits (53), Expect(2) = 0.46
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -3
Query: 392 GGSALEPGGDGSACARGTS 336
GGSA PGG+ SA G S
Sbjct: 70 GGSASAPGGNSSALGSGAS 88
Score = 25.0 bits (52), Expect(2) = 0.46
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -3
Query: 437 GLVVPRGGRERVLPAGGSALEPGG 366
G P G LP GG A+ PGG
Sbjct: 6 GDAAPPGSGMAALPGGGEAVLPGG 29
>06_03_0336 + 19671500-19672150,19672681-19673301
Length = 423
Score = 30.7 bits (66), Expect = 0.87
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -3
Query: 494 SEPAGETGDARK*RLC-LSCGLVVPRGGRERVLPAGGSALEPGGDG 360
S A +G R+ C +CGL+ P G VLPA A EPGG G
Sbjct: 310 SAAAAASGRRRRLLSCPCACGLMAPGAGGIGVLPA--FAYEPGGGG 353
>07_03_0793 + 21552499-21552729
Length = 76
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -3
Query: 422 RGGRERVLPAGGSALEPGGDGSACARGTSL 333
+GG +RV +GG ++ GGD + ARG +
Sbjct: 22 QGGGQRVNRSGGGSMRRGGDNGSLARGDDI 51
>02_05_0059 - 25482207-25482271,25482432-25482651
Length = 94
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3
Query: 422 RGGRERVLPAGGSALEPGGDGSACARG 342
RGG ++V GG +++ GGD + ARG
Sbjct: 22 RGGGQQVNDGGGGSMKGGGDSGSLARG 48
>01_06_1358 -
36637369-36637573,36637643-36638119,36638217-36638446,
36638545-36638677,36638772-36638860,36638959-36639029,
36639116-36639185,36640178-36640300,36640492-36640941
Length = 615
Score = 30.3 bits (65), Expect = 1.1
Identities = 25/69 (36%), Positives = 30/69 (43%), Gaps = 5/69 (7%)
Frame = -3
Query: 569 GGAHVSARHGQGPGGYRSXAHTXRRSEPAGETGDARK*RLCLSC--GLVVPRG---GRER 405
GG V HG G G R+ + RRS+ A D R ++C GL V G R
Sbjct: 52 GGGGVRRGHGAGVAGVRALFSSARRSKRASVIIDQAWLRNVVACLLGLTVVAGLVLSSHR 111
Query: 404 VLPAGGSAL 378
V AGG L
Sbjct: 112 VSGAGGGRL 120
>01_05_0339 + 21135250-21135467,21136465-21137513,21137905-21138962
Length = 774
Score = 30.3 bits (65), Expect = 1.1
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +3
Query: 198 GVLGWARDRNRSWWPAE 248
G L W R RN SWWP +
Sbjct: 25 GALVWVRRRNGSWWPGQ 41
>04_04_0673 -
27168305-27168874,27168977-27169099,27169180-27169440,
27169723-27169970,27170403-27170483,27171530-27171902
Length = 551
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = -3
Query: 437 GLVVPRGGRERVLPAGGSALEPGGDGSACARGTSLPPPCNLRR 309
GL+ PR G LP E G G A A S P C RR
Sbjct: 153 GLLPPRNGLHVPLPGQAQEQETAGGGGAGAGTGSALPECRCRR 195
>12_02_1261 + 27410921-27413401
Length = 826
Score = 29.5 bits (63), Expect = 2.0
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 186 TCLCGVLGWARDRNRSWWPA 245
T G L WA+ + R WWPA
Sbjct: 9 TLAAGDLVWAKSKRRPWWPA 28
>11_06_0257 + 21746643-21748091
Length = 482
Score = 29.5 bits (63), Expect = 2.0
Identities = 22/58 (37%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Frame = -3
Query: 404 VLPAGGSALEPGGDGSACARGTSLPPPCNL---RRGGSRRT*AEP*KLGPSPGVGLRW 240
VL G A GGD +AC P C L R G R T + P G GLRW
Sbjct: 189 VLSCGPHAAAGGGDAAACVVLLLHMPRCELSYARPGDERWT-----WISPGAGTGLRW 241
>04_01_0167 + 1864956-1865495
Length = 179
Score = 29.5 bits (63), Expect = 2.0
Identities = 21/64 (32%), Positives = 27/64 (42%)
Frame = -3
Query: 443 SCGLVVPRGGRERVLPAGGSALEPGGDGSACARGTSLPPPCNLRRGGSRRT*AEP*KLGP 264
+C + G V A +A P +A R T LPP RR G R + A P P
Sbjct: 20 ACSVTAAMPGARAVYSAPVAAGGPPSSHAASLRST-LPPCSTPRRAGQRSSTAAPRHHRP 78
Query: 263 SPGV 252
SP +
Sbjct: 79 SPAL 82
>10_04_0012 + 7555067-7555867
Length = 266
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -3
Query: 389 GSALEPGGDGSACARGTSLPPPCNLRRGGSR 297
GS +P GD +GTS PC LR+G R
Sbjct: 8 GSCRKPCGDQGRQQQGTSFLHPCPLRQGEGR 38
>12_02_0992 +
25083397-25083537,25084198-25084228,25084971-25085139,
25085228-25085291,25085408-25085474,25086543-25086586,
25086835-25086922,25087079-25087238,25087659-25087779,
25087859-25087942,25088043-25088162,25088689-25088901,
25088995-25089054,25089144-25089262,25089407-25089465,
25089585-25089919
Length = 624
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +3
Query: 198 GVLGWARDRNRSW-WPAEPYTRARAELSWLSLGT 296
GVLGW +NRS WP +RAR L L LG+
Sbjct: 58 GVLGWGEIKNRSCPWPVVRLSRAR--LVTLCLGS 89
>11_03_0183 - 11310671-11313625,11314243-11314287,11314550-11314717
Length = 1055
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 204 LGWARDRNRSWWPAEPYTRARAELSWLSLGTTRASTAEVTW 326
L W + R+ WWP + + A A S L+L TRA V +
Sbjct: 119 LVWGKVRSHPWWPGQVFDAADA--SKLALKHTRAGAPLVAY 157
>08_02_0386 -
16575636-16575698,16575799-16575858,16575947-16576239,
16576361-16576517,16576601-16576948,16577047-16577177,
16577417-16577882,16578425-16579132
Length = 741
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = -2
Query: 333 PPSM*PPPWRLSSYLG*AMKARPEPGCRAPLATTNDFGHGP 211
PPS PPPW ++ + P+P AP A G P
Sbjct: 15 PPSPTPPPWLHGPHVPSTSVSPPDPATEAPPAPKQHRGPRP 55
>04_03_0801 - 19828175-19828770,19828913-19828994
Length = 225
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -3
Query: 395 AGGSALEPGGDGSACARGTSLPPPC 321
+GG E GG G C + PPPC
Sbjct: 173 SGGHGGECGGGGGGCKKPCCSPPPC 197
>02_05_0419 -
28814754-28816114,28816749-28817435,28817554-28817774,
28818536-28818750
Length = 827
Score = 28.7 bits (61), Expect = 3.5
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3
Query: 198 GVLGWARDRNRSWWP 242
G + W R RN SWWP
Sbjct: 25 GTIVWVRRRNGSWWP 39
>12_02_0121 + 13919496-13919734,13919821-13919982,13920102-13920534
Length = 277
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = -3
Query: 437 GLVVPRGGRERVLPAGGSALEPGGDG 360
G V+P GR VLP G A+ PGG+G
Sbjct: 251 GEVMP--GRGEVLPGRGKAILPGGEG 274
>03_01_0313 - 2476171-2476569
Length = 132
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 98 EWRVFVGGSGRGVAERGAVKREARRARQS 12
EWR + GG+ RG A G +R+ R R +
Sbjct: 62 EWRRWWGGAWRGNAGEGGARRQCRWGRDA 90
>02_01_0574 + 4247469-4248196,4249501-4249691,4250565-4251022
Length = 458
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -1
Query: 289 RLSHESSARARV*GSAGHHERFRSRAQPKTPHKH 188
RL H+ V +A HH RS A+ + H+H
Sbjct: 378 RLQHDGDGDDDVAAAAAHHHLMRSLARQQQQHRH 411
>12_02_0927 + 24473634-24474236,24474464-24474518,24474579-24474952
Length = 343
Score = 27.9 bits (59), Expect = 6.1
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = -3
Query: 554 SARH--GQGPGGYRSXAHT-XRRSEPAGETGDARK*RLCLS 441
S RH GQG GG R + T S+P G++ D+RK +L LS
Sbjct: 244 SPRHQTGQGSGGPRIRSETQPSASDPVGQS-DSRKRKLVLS 283
>08_01_0935 - 9218271-9219860,9219959-9220232,9220506-9221767
Length = 1041
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -3
Query: 428 VPRGGRERVLPAGGSALEPGGDG 360
+ RGG A GSAL PGG G
Sbjct: 404 IARGGAPIAAAAAGSALRPGGSG 426
>07_01_1139 -
10684647-10685837,10685877-10686251,10686351-10686534,
10686699-10686895
Length = 648
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 406 RSRPPRGTTSPQERQRRYLRASPVSP 483
+SR RG+ P + QRRY R SP P
Sbjct: 617 QSRQLRGSRLPHQSQRRYGRRSPRRP 642
>05_03_0466 - 14362190-14362312,14362411-14362658,14363289-14363664
Length = 248
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Frame = -3
Query: 440 CGL--VVPRGGRERVLPAGGSALEPGGD 363
CG+ +VP G +V+ GG + PGGD
Sbjct: 14 CGVRVIVPGSGGVQVIVPGGGGVHPGGD 41
>01_04_0138 + 16554175-16554822
Length = 215
Score = 27.9 bits (59), Expect = 6.1
Identities = 19/57 (33%), Positives = 24/57 (42%)
Frame = -3
Query: 530 GGYRSXAHTXRRSEPAGETGDARK*RLCLSCGLVVPRGGRERVLPAGGSALEPGGDG 360
G R A RR+ G++G R R + V P G R R AG + GG G
Sbjct: 112 GSRRRKAAIGRRT---GKSGTRRSRRCVAAAARVKPNGDRRRKKAAGRVVWQEGGSG 165
>01_03_0213 - 13860284-13860299,13860480-13860537,13860678-13861107
Length = 167
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -3
Query: 80 GGSGRGVAERGAVKREARRARQSG 9
GG G G E V+R A RAR+ G
Sbjct: 112 GGEGSGEVEAATVERRAERARRRG 135
>06_03_0683 - 23490215-23490997
Length = 260
Score = 27.5 bits (58), Expect = 8.1
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = -3
Query: 497 RSEPAGETGDARK*RLCLSCGLVVPRGGRERVLPAG 390
RS AGE GD R R+C G V G ER+ P G
Sbjct: 196 RSTGAGEFGDLRAGRVCYRRGGPVQGGMMERI-PCG 230
>03_04_0113 + 17382370-17382714
Length = 114
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -3
Query: 422 RGGRERVLPAGG-SALEPGGDGSACARGTSLPPPCNL 315
+G RE PA +A P G GS A+ LPPP L
Sbjct: 20 QGVREVADPATDVAAATPSGGGSTAAKSPLLPPPLPL 56
>03_02_0431 -
8384259-8384266,8384649-8384787,8385875-8386067,
8386180-8387702
Length = 620
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -1
Query: 379 WSQVGMGQPVLVVHRSPLHVTSAVEALV 296
W + +G+PVLVV SP + AV LV
Sbjct: 243 WELMVVGEPVLVVAPSPPQCSEAVAGLV 270
>02_02_0299 -
8726024-8726101,8726460-8726534,8726836-8726965,
8727406-8727601,8727894-8727965,8728087-8728159,
8728240-8728344,8728502-8728624,8728730-8728806,
8729064-8729108,8729214-8729433
Length = 397
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = -3
Query: 416 GRERVLPAGGSALEPGGDGSACARGTSLPPPC 321
G R +GG A GG GSA G LPP C
Sbjct: 13 GAARTGGSGGDAAAGGGGGSA-GNGKPLPPCC 43
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,922,202
Number of Sequences: 37544
Number of extensions: 559933
Number of successful extensions: 2287
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 2110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2280
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1340735508
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -