Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_D14
         (374 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0496 + 14706959-14707020,14707173-14707538,14708070-147082...    28   2.1  
01_06_1094 - 34478538-34478624,34478860-34478931,34479154-344792...    28   2.7  
03_02_0850 + 11775232-11776077,11776761-11777321                       27   3.6  
11_01_0615 + 4916377-4916739,4917301-4918086                           27   6.3  
11_04_0313 + 16270807-16272271,16272713-16274140,16274289-16274788     26   8.4  

>05_03_0496 +
           14706959-14707020,14707173-14707538,14708070-14708209,
           14708319-14708566,14708814-14708946,14709096-14709159,
           14709284-14709380,14709505-14709607,14709702-14709838,
           14710063-14710152,14710240-14710401
          Length = 533

 Score = 28.3 bits (60), Expect = 2.1
 Identities = 20/62 (32%), Positives = 32/62 (51%)
 Frame = +3

Query: 3   SWISEHRIGGRV*DGSLTIPAVFYSRLLRVFVYYLPAQFTYILLDGGAFFVNFSNYFWRF 182
           SW  + + G    DG+ +I A  + RL+   ++ L  Q+     +G AFF  F  +F+ F
Sbjct: 45  SWRGQQK-GREYGDGANSIAAPVFVRLVLGAIFVLVGQW-----EGYAFFFFFFFFFFFF 98

Query: 183 FF 188
           FF
Sbjct: 99  FF 100


>01_06_1094 -
           34478538-34478624,34478860-34478931,34479154-34479222,
           34479312-34479422,34480390-34480528,34480590-34480705,
           34480821-34480968,34481058-34481215,34481654-34481827,
           34482592-34483056
          Length = 512

 Score = 27.9 bits (59), Expect = 2.7
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +3

Query: 84  LRVFVYYLPAQFTYILL 134
           LRV+VY +P++FTY LL
Sbjct: 113 LRVYVYEMPSRFTYDLL 129


>03_02_0850 + 11775232-11776077,11776761-11777321
          Length = 468

 Score = 27.5 bits (58), Expect = 3.6
 Identities = 12/18 (66%), Positives = 15/18 (83%)
 Frame = +3

Query: 84  LRVFVYYLPAQFTYILLD 137
           LRVF+Y LPA+F + LLD
Sbjct: 70  LRVFMYDLPAEFHFGLLD 87


>11_01_0615 + 4916377-4916739,4917301-4918086
          Length = 382

 Score = 26.6 bits (56), Expect = 6.3
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +2

Query: 23  DRRACVGWIANDTSSFLFPSSKSVCLLPSGTIYVHPSRRW 142
           +RR C+    ND    L P+  S C +P+G  Y   +R W
Sbjct: 90  NRRVCLDLANNDG---LTPADLSRCTIPAGLNYKTNARTW 126


>11_04_0313 + 16270807-16272271,16272713-16274140,16274289-16274788
          Length = 1130

 Score = 26.2 bits (55), Expect = 8.4
 Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
 Frame = +3

Query: 87  RVFVYYLPAQ---FTYILLDGGAFFVNFSNYFWRFFFLHLLTLYRFHVEKATATSLKAAF 257
           RV   YLPA     T++ +  G F      + WR   LHL TL  F   + T  S +   
Sbjct: 498 RVESNYLPASSRLMTHMSVTSG-FLPTLRKFRWRITELHLRTLIVFGPSEHTEPSTEDIL 556

Query: 258 EE 263
           +E
Sbjct: 557 DE 558


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,124,842
Number of Sequences: 37544
Number of extensions: 146405
Number of successful extensions: 343
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 343
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 600754600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)