Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_D14
(374 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006677-3|AAF39952.2| 298|Caenorhabditis elegans Serpentine re... 31 0.35
U42438-8|AAF99867.2| 368|Caenorhabditis elegans Homolog of yeas... 27 3.3
AF105010-1|AAD16893.1| 368|Caenorhabditis elegans LAG1Ce-1 prot... 27 3.3
U41557-7|AAQ01534.1| 381|Caenorhabditis elegans Hypothetical pr... 27 5.8
AF016421-6|AAT92074.1| 984|Caenorhabditis elegans Hypothetical ... 27 5.8
AF016421-5|AAO12429.1| 1008|Caenorhabditis elegans Hypothetical ... 27 5.8
AF016421-4|AAC25789.1| 1067|Caenorhabditis elegans Hypothetical ... 27 5.8
AF016421-3|AAM45374.1| 1051|Caenorhabditis elegans Hypothetical ... 27 5.8
Z78420-6|CAB01711.2| 1243|Caenorhabditis elegans Hypothetical pr... 26 7.6
Z78418-6|CAB01699.2| 1243|Caenorhabditis elegans Hypothetical pr... 26 7.6
Z49967-7|CAA90257.1| 740|Caenorhabditis elegans Hypothetical pr... 26 7.6
>AC006677-3|AAF39952.2| 298|Caenorhabditis elegans Serpentine
receptor, class x protein28 protein.
Length = 298
Score = 30.7 bits (66), Expect = 0.35
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +3
Query: 69 FYSRLLRVFVYYLPAQFTYILLDGGAFFVNFSNYFWRFFFLHLLTLYRF 215
F + L R ++P +T+I + F + N+ W F + +TLY F
Sbjct: 95 FLNALNRCCALFMPLWYTHIFSNSKTVF--YRNFIWIFSIIFCITLYEF 141
>U42438-8|AAF99867.2| 368|Caenorhabditis elegans Homolog of yeast
longevity geneprotein 1 protein.
Length = 368
Score = 27.5 bits (58), Expect = 3.3
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 99 YYLPAQFTYILLDGGAFFVNFSNYFWRFFFLHLLTLY 209
Y + F Y LL G F V S+ FW+ H++T++
Sbjct: 142 YMIETGFYYSLLIGSTFDVRRSD-FWQLMVHHVITIF 177
>AF105010-1|AAD16893.1| 368|Caenorhabditis elegans LAG1Ce-1
protein.
Length = 368
Score = 27.5 bits (58), Expect = 3.3
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 99 YYLPAQFTYILLDGGAFFVNFSNYFWRFFFLHLLTLY 209
Y + F Y LL G F V S+ FW+ H++T++
Sbjct: 142 YMIETGFYYSLLIGSTFDVRRSD-FWQLMVHHVITIF 177
>U41557-7|AAQ01534.1| 381|Caenorhabditis elegans Hypothetical
protein C50F7.1b protein.
Length = 381
Score = 26.6 bits (56), Expect = 5.8
Identities = 20/70 (28%), Positives = 28/70 (40%)
Frame = +3
Query: 159 FSNYFWRFFFLHLLTLYRFHVEKATATSLKAAFEE*YTYSFXISXSLYQRIKQSRWSRRY 338
F+ + W FF L T A+ +L A + Y I +L + W R Y
Sbjct: 92 FTEWLWGQFFCRLSTWANASTSFASVYTLVAVTADRY---LAICHTLKYN---TSWDREY 145
Query: 339 RKRVXIAVWV 368
K V AVW+
Sbjct: 146 TKYVIFAVWL 155
>AF016421-6|AAT92074.1| 984|Caenorhabditis elegans Hypothetical
protein F44E7.4d protein.
Length = 984
Score = 26.6 bits (56), Expect = 5.8
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -3
Query: 105 GNKQTLLEDGNKK 67
GNKQTLLED KK
Sbjct: 242 GNKQTLLEDARKK 254
>AF016421-5|AAO12429.1| 1008|Caenorhabditis elegans Hypothetical
protein F44E7.4c protein.
Length = 1008
Score = 26.6 bits (56), Expect = 5.8
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -3
Query: 105 GNKQTLLEDGNKK 67
GNKQTLLED KK
Sbjct: 183 GNKQTLLEDARKK 195
>AF016421-4|AAC25789.1| 1067|Caenorhabditis elegans Hypothetical
protein F44E7.4a protein.
Length = 1067
Score = 26.6 bits (56), Expect = 5.8
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -3
Query: 105 GNKQTLLEDGNKK 67
GNKQTLLED KK
Sbjct: 242 GNKQTLLEDARKK 254
>AF016421-3|AAM45374.1| 1051|Caenorhabditis elegans Hypothetical
protein F44E7.4b protein.
Length = 1051
Score = 26.6 bits (56), Expect = 5.8
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -3
Query: 105 GNKQTLLEDGNKK 67
GNKQTLLED KK
Sbjct: 242 GNKQTLLEDARKK 254
>Z78420-6|CAB01711.2| 1243|Caenorhabditis elegans Hypothetical
protein F45H11.4 protein.
Length = 1243
Score = 26.2 bits (55), Expect = 7.6
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +3
Query: 168 YFWRFFFLHLLTLYRFHVEKATATSLKAAF 257
+FW FF + L TLY F +A F
Sbjct: 743 FFWDFFLITLCTLYAFKTRNLPENFNEAKF 772
>Z78418-6|CAB01699.2| 1243|Caenorhabditis elegans Hypothetical
protein F45H11.4 protein.
Length = 1243
Score = 26.2 bits (55), Expect = 7.6
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +3
Query: 168 YFWRFFFLHLLTLYRFHVEKATATSLKAAF 257
+FW FF + L TLY F +A F
Sbjct: 743 FFWDFFLITLCTLYAFKTRNLPENFNEAKF 772
>Z49967-7|CAA90257.1| 740|Caenorhabditis elegans Hypothetical
protein F54C9.9 protein.
Length = 740
Score = 26.2 bits (55), Expect = 7.6
Identities = 12/37 (32%), Positives = 25/37 (67%)
Frame = -1
Query: 215 KSVQR*KMKEKKTPKIIREINEESTTVEKDVRKLCRK 105
KS++R KM++++ K + E+N+++ E+D K +K
Sbjct: 604 KSLKR-KMEDEQMEKEMAEMNDQNDNTEEDAEKKKKK 639
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,692,454
Number of Sequences: 27780
Number of extensions: 128633
Number of successful extensions: 410
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 410
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 546325158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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