Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_D09
         (568 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    24   0.79 
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    24   0.79 
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          24   0.79 
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           23   1.8  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   7.3  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   9.7  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   9.7  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   9.7  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 24.2 bits (50), Expect = 0.79
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = +3

Query: 225 LPNAAHVCGVMATLXNDNGQFGVKCTGSWRNIHRWLHGTA 344
           +  A H  G+ +     N  + V  TGSW ++   +H  A
Sbjct: 170 MSGATHHGGIKSDSVTSNAWWDVHSTGSWLDMSGGMHQMA 209


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 24.2 bits (50), Expect = 0.79
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -3

Query: 380 TTNPRKSQSLAPRGPMQPPVYVSPRTCAFDTE 285
           + +P+  Q L  + P    V V   TC +DTE
Sbjct: 170 SASPKACQFLYNQFPGSSQVVVKDETCQYDTE 201


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 24.2 bits (50), Expect = 0.79
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -3

Query: 380 TTNPRKSQSLAPRGPMQPPVYVSPRTCAFDTE 285
           + +P+  Q L  + P    V V   TC +DTE
Sbjct: 190 SASPKACQFLYNQFPGSSQVVVKDETCQYDTE 221


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 429 IVRKEYPAGSNEGRKTNNESKEEPKS 352
           +  +E P G N G KTN   +E P++
Sbjct: 296 LAAQEIP-GQNPGEKTNIAPRERPRA 320


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +3

Query: 99  MPSCVWFESGEKRNILASILAGLLFFA 179
           MP  VWF    K+ ++  ++  +L FA
Sbjct: 148 MPLIVWFPFDYKQPVVFDLVYFILAFA 174


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 7/21 (33%), Positives = 10/21 (47%)
 Frame = -3

Query: 386 KPTTNPRKSQSLAPRGPMQPP 324
           KP+T P     +  + P  PP
Sbjct: 180 KPSTKPTNKPVVVTKPPQAPP 200


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 56  KYNINHHELFRKH 94
           K N+NH+E  RK+
Sbjct: 322 KSNLNHNEQLRKY 334


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 56  KYNINHHELFRKH 94
           K N+NH+E  RK+
Sbjct: 214 KSNLNHNEQLRKY 226


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,724
Number of Sequences: 336
Number of extensions: 3240
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13995094
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)