Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_D09
         (568 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001382-1|AAN71137.1|  152|Drosophila melanogaster GH03029p pro...    86   3e-17
AE014296-823|AAF47882.2|  152|Drosophila melanogaster CG15012-PB...    86   3e-17
Z11704-1|CAA77765.1|  148|Drosophila melanogaster homeobox prote...    28   7.7  
Y08822-1|CAA70057.1|  372|Drosophila melanogaster ladybird late ...    28   7.7  
AY122068-1|AAM52580.1|  853|Drosophila melanogaster AT11715p pro...    28   7.7  
AY118880-1|AAM50740.1|  388|Drosophila melanogaster HL01222p pro...    28   7.7  
AE014298-2104|AAF48424.1| 2075|Drosophila melanogaster CG5627-PA...    28   7.7  

>BT001382-1|AAN71137.1|  152|Drosophila melanogaster GH03029p
           protein.
          Length = 152

 Score = 86.2 bits (204), Expect = 3e-17
 Identities = 41/93 (44%), Positives = 58/93 (62%)
 Frame = +1

Query: 268 SMIMVNSVSNAQVRGETYTGGCMGPRGARLWLFLGFVVGFASLIAACWILFANYVNASSS 447
           S  MVN+V    +  E  +    G R A++WL +GF++GFAS+IAA W++  +++N +  
Sbjct: 62  SFCMVNAVKGEHISDENSSES--GARIAKIWLLVGFLMGFASIIAAIWVMIDDFIN-NEK 118

Query: 448 KHAWPGVGLFMQNAFIFAGSLVXKFGRTEDLWS 546
           K  W GV L MQN FI   SLV KFGR E+ W+
Sbjct: 119 KDGWFGVALLMQNVFILFASLVYKFGRNEEEWN 151



 Score = 46.0 bits (104), Expect = 4e-05
 Identities = 23/51 (45%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = +3

Query: 117 FESGEKRNILASILAGLLFFAGWWFIIDAASVYPGDLPNAAHV-CGVMATL 266
           F     RN   SI+AGLLFFAGWW +IDA S+         HV  G+  T+
Sbjct: 11  FTGDASRNRNTSIIAGLLFFAGWWVLIDAMSIDGKHQITTGHVFIGIFGTI 61


>AE014296-823|AAF47882.2|  152|Drosophila melanogaster CG15012-PB
           protein.
          Length = 152

 Score = 86.2 bits (204), Expect = 3e-17
 Identities = 41/93 (44%), Positives = 58/93 (62%)
 Frame = +1

Query: 268 SMIMVNSVSNAQVRGETYTGGCMGPRGARLWLFLGFVVGFASLIAACWILFANYVNASSS 447
           S  MVN+V    +  E  +    G R A++WL +GF++GFAS+IAA W++  +++N +  
Sbjct: 62  SFCMVNAVKGEHISDENSSES--GARIAKIWLLVGFLMGFASIIAAIWVMIDDFIN-NEK 118

Query: 448 KHAWPGVGLFMQNAFIFAGSLVXKFGRTEDLWS 546
           K  W GV L MQN FI   SLV KFGR E+ W+
Sbjct: 119 KDGWFGVALLMQNVFILFASLVYKFGRNEEEWN 151



 Score = 46.0 bits (104), Expect = 4e-05
 Identities = 23/51 (45%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = +3

Query: 117 FESGEKRNILASILAGLLFFAGWWFIIDAASVYPGDLPNAAHV-CGVMATL 266
           F     RN   SI+AGLLFFAGWW +IDA S+         HV  G+  T+
Sbjct: 11  FTGDASRNRNTSIIAGLLFFAGWWVLIDAMSIDGKHQITTGHVFIGIFGTI 61


>Z11704-1|CAA77765.1|  148|Drosophila melanogaster homeobox protein
           protein.
          Length = 148

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -3

Query: 425 FAKSIQQAAMRDAKPTTNPRKSQSLAPRGPMQPPVYVSPRTCA 297
           F K++    +   +P +   +SQSLAP+ P  PP   + RT A
Sbjct: 104 FLKNVNDLTILKTRPVS---RSQSLAPQPPTSPPATPALRTHA 143


>Y08822-1|CAA70057.1|  372|Drosophila melanogaster ladybird late
           homeodomain transcriptionfactor protein.
          Length = 372

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -3

Query: 425 FAKSIQQAAMRDAKPTTNPRKSQSLAPRGPMQPPVYVSPRTCA 297
           F K++    +   +P +   +SQSLAP+ P  PP   + RT A
Sbjct: 328 FLKNVNDLTILKTRPVS---RSQSLAPQPPTSPPATPALRTHA 367


>AY122068-1|AAM52580.1|  853|Drosophila melanogaster AT11715p
           protein.
          Length = 853

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -2

Query: 438 SINIVRKEYPAGSNEGRKTNNESKEEPKSGTTRSHATTC 322
           +I+++ KE+P   + G    NE+K EP SG T      C
Sbjct: 526 AISVLNKEHP---HHGTTAGNEAKFEPSSGYTLRATIDC 561


>AY118880-1|AAM50740.1|  388|Drosophila melanogaster HL01222p
           protein.
          Length = 388

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = -3

Query: 389 AKPTTNPRKSQSLAPRGPMQP 327
           A PT+NP K   L PR P QP
Sbjct: 207 APPTSNPAKLPQLPPRVPSQP 227


>AE014298-2104|AAF48424.1| 2075|Drosophila melanogaster CG5627-PA
            protein.
          Length = 2075

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = -3

Query: 389  AKPTTNPRKSQSLAPRGPMQP 327
            A PT+NP K   L PR P QP
Sbjct: 1894 APPTSNPAKLPQLPPRVPSQP 1914


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,357,908
Number of Sequences: 53049
Number of extensions: 606987
Number of successful extensions: 2144
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2142
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2213979693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)