Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_D09
(568 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024865-1|AAF60878.1| 157|Caenorhabditis elegans Hypothetical ... 120 7e-28
Z95310-2|CAB08563.1| 394|Caenorhabditis elegans Hypothetical pr... 32 0.33
Z83104-6|CAB05479.1| 394|Caenorhabditis elegans Hypothetical pr... 32 0.33
Z73898-7|CAA98070.1| 577|Caenorhabditis elegans Hypothetical pr... 29 2.3
AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical ... 29 3.1
AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical ... 29 3.1
Z66522-6|CAH04737.1| 1147|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z66522-5|CAA91405.1| 1149|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z81135-4|CAB03457.1| 500|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z80216-2|CAB02279.2| 239|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z46242-12|CAA86332.1| 690|Caenorhabditis elegans Hypothetical p... 27 7.1
Z46242-11|CAA86326.1| 1077|Caenorhabditis elegans Hypothetical p... 27 7.1
AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical ... 27 7.1
AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical ... 27 7.1
AL032634-4|CAA21599.1| 500|Caenorhabditis elegans Hypothetical ... 27 7.1
AF256467-1|AAF71546.1| 690|Caenorhabditis elegans SEL-5B serine... 27 7.1
AF256466-1|AAF71545.1| 1077|Caenorhabditis elegans SEL-5A serine... 27 7.1
AC006832-5|AAF39998.1| 513|Caenorhabditis elegans Hypothetical ... 27 7.1
Z92796-5|CAB07233.1| 518|Caenorhabditis elegans Hypothetical pr... 27 9.4
U23454-2|AAC46519.2| 368|Caenorhabditis elegans Hypothetical pr... 27 9.4
AF077534-1|AAK71375.1| 1136|Caenorhabditis elegans Temporarily a... 27 9.4
AF003385-4|AAB54244.1| 333|Caenorhabditis elegans Hypothetical ... 27 9.4
>AC024865-1|AAF60878.1| 157|Caenorhabditis elegans Hypothetical
protein Y74C10AL.2 protein.
Length = 157
Score = 120 bits (289), Expect = 7e-28
Identities = 53/92 (57%), Positives = 67/92 (72%)
Frame = +1
Query: 268 SMIMVNSVSNAQVRGETYTGGCMGPRGARLWLFLGFVVGFASLIAACWILFANYVNASSS 447
+M MVN++SN+QVRGE+ G +G +G+RLWL FVV FASL+AA WILF++YV S
Sbjct: 65 AMFMVNAISNSQVRGESLHEGLLGTKGSRLWLMAAFVVSFASLVAATWILFSDYVLIQGS 124
Query: 448 KHAWPGVGLFMQNAFIFAGSLVXKFGRTEDLW 543
WPGV LF+ N IFA S V KFGRTE++W
Sbjct: 125 HSVWPGVALFLTNFIIFASSCVYKFGRTEEMW 156
Score = 42.3 bits (95), Expect = 2e-04
Identities = 19/44 (43%), Positives = 29/44 (65%)
Frame = +3
Query: 81 CFENISMPSCVWFESGEKRNILASILAGLLFFAGWWFIIDAASV 212
CF+ I +C F+ +RN +AS+++ LFF GWW +ID A+V
Sbjct: 4 CFDQIRC-NCS-FDLEGRRNAVASVVSAALFFIGWWLMIDTAAV 45
>Z95310-2|CAB08563.1| 394|Caenorhabditis elegans Hypothetical
protein F09B12.5 protein.
Length = 394
Score = 31.9 bits (69), Expect = 0.33
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = -3
Query: 467 TPGQACLEELALT*FAKSIQQA---AMRDAKPTTNPRKSQSLAPRGPMQPPVYVSPRT 303
T +A LE + LT KS Q+ AKPT P S++ P P P YV P T
Sbjct: 240 TTERAHLENILLTIPLKSTTQSPALTSSSAKPTKPPTTSETSKPTFPSTLPAYVLPMT 297
>Z83104-6|CAB05479.1| 394|Caenorhabditis elegans Hypothetical
protein F09B12.5 protein.
Length = 394
Score = 31.9 bits (69), Expect = 0.33
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = -3
Query: 467 TPGQACLEELALT*FAKSIQQA---AMRDAKPTTNPRKSQSLAPRGPMQPPVYVSPRT 303
T +A LE + LT KS Q+ AKPT P S++ P P P YV P T
Sbjct: 240 TTERAHLENILLTIPLKSTTQSPALTSSSAKPTKPPTTSETSKPTFPSTLPAYVLPMT 297
>Z73898-7|CAA98070.1| 577|Caenorhabditis elegans Hypothetical
protein ZK822.5a protein.
Length = 577
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 334 MGPRGARLWLFLGFVVGFASLIAACWI 414
M RGA++WL FV+G AS I C++
Sbjct: 81 MFQRGAQIWL--NFVIGVASSIVTCFV 105
>AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical
protein Y59A8B.9 protein.
Length = 187
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = -3
Query: 416 SIQQAAMRDAKPTTNPRKSQS-LAPRGPMQPPVYVSPRTCA 297
+++ A A P T P S+S APR P P+TCA
Sbjct: 39 TMRTPAATPAAPPTRPTPSRSSAAPRATAPTPTAAPPKTCA 79
>AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical
protein Y59A8B.7 protein.
Length = 316
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = -3
Query: 416 SIQQAAMRDAKPTTNPRKSQS-LAPRGPMQPPVYVSPRTCA 297
+++ A A P T P S+S APR P P+TCA
Sbjct: 168 TMRTPAATPAAPPTRPTPSRSSAAPRATAPTPTAAPPKTCA 208
>Z66522-6|CAH04737.1| 1147|Caenorhabditis elegans Hypothetical protein
F14E5.2b protein.
Length = 1147
Score = 27.9 bits (59), Expect = 5.4
Identities = 27/114 (23%), Positives = 49/114 (42%), Gaps = 13/114 (11%)
Frame = -3
Query: 530 VRPNLXTRDPAKMKAFC------MNKPTPGQACLEELALT*----FAKSIQQAAMRDAKP 381
+RP L T + + +C +N P Q L+ + ++ F +SI D P
Sbjct: 887 LRPQLLTSCRKEAEQYCPEDMKKINMPQYSQTVLDGVVVSCLRDKFRQSISDQNHIDFSP 946
Query: 380 TTNPRKSQSL--APRGP-MQPPVYVSPRTCAFDTELTIIIXQGGHHSAYMSCIR 228
+ S+++ A P + PP+Y + ++ D I+ GGH M C++
Sbjct: 947 RCSAEVSRAIVEAEFDPQLDPPLYNACKSTINDHCSATIMESGGHFDNVMECLK 1000
>Z66522-5|CAA91405.1| 1149|Caenorhabditis elegans Hypothetical protein
F14E5.2a protein.
Length = 1149
Score = 27.9 bits (59), Expect = 5.4
Identities = 27/114 (23%), Positives = 49/114 (42%), Gaps = 13/114 (11%)
Frame = -3
Query: 530 VRPNLXTRDPAKMKAFC------MNKPTPGQACLEELALT*----FAKSIQQAAMRDAKP 381
+RP L T + + +C +N P Q L+ + ++ F +SI D P
Sbjct: 889 LRPQLLTSCRKEAEQYCPEDMKKINMPQYSQTVLDGVVVSCLRDKFRQSISDQNHIDFSP 948
Query: 380 TTNPRKSQSL--APRGP-MQPPVYVSPRTCAFDTELTIIIXQGGHHSAYMSCIR 228
+ S+++ A P + PP+Y + ++ D I+ GGH M C++
Sbjct: 949 RCSAEVSRAIVEAEFDPQLDPPLYNACKSTINDHCSATIMESGGHFDNVMECLK 1002
>Z81135-4|CAB03457.1| 500|Caenorhabditis elegans Hypothetical
protein W01G7.5 protein.
Length = 500
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = -3
Query: 389 AKPTTNPRKSQSLAPRGPMQPPVYVS-PRTCAFDTELTI 276
AKP P + AP+ P PP S PR A TI
Sbjct: 55 AKPAPKPTPKSAPAPKSPKSPPARRSIPRAAATAANSTI 93
>Z80216-2|CAB02279.2| 239|Caenorhabditis elegans Hypothetical
protein F10G8.2 protein.
Length = 239
Score = 27.5 bits (58), Expect = 7.1
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +3
Query: 54 LNIILITMSCFENISMPSCVWFESGEKRNIL 146
+ I +I +SCF I + + VWF+ +K +++
Sbjct: 76 IKIAVIAVSCFPYIIVQNEVWFKEQKKHHVI 106
>Z46242-12|CAA86332.1| 690|Caenorhabditis elegans Hypothetical
protein F35G12.3b protein.
Length = 690
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -3
Query: 398 MRDAKPTTNPRKSQSLAPRGPMQPPVYVSPRTCAFDTELTII 273
MRD +NPR + +PR P PP+ S + + ++ I
Sbjct: 347 MRDG---SNPRNKRDSSPRNPEAPPIQSSSKMASLSQQVPSI 385
>Z46242-11|CAA86326.1| 1077|Caenorhabditis elegans Hypothetical
protein F35G12.3a protein.
Length = 1077
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -3
Query: 398 MRDAKPTTNPRKSQSLAPRGPMQPPVYVSPRTCAFDTELTII 273
MRD +NPR + +PR P PP+ S + + ++ I
Sbjct: 347 MRDG---SNPRNKRDSSPRNPEAPPIQSSSKMASLSQQVPSI 385
>AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical
protein Y48B6A.6b protein.
Length = 533
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -3
Query: 410 QQAAMRDAKPTTNPRKSQSLAPRGPMQPPVYVSPRTCAFDTELTI 276
+ ++R + PT+ S+ +P P +P V VSP D L+I
Sbjct: 435 EDCSIRPSSPTSVSHGSRPQSPAVPKKPSVTVSPLGLLCDPNLSI 479
>AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical
protein Y48B6A.6a protein.
Length = 687
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -3
Query: 410 QQAAMRDAKPTTNPRKSQSLAPRGPMQPPVYVSPRTCAFDTELTI 276
+ ++R + PT+ S+ +P P +P V VSP D L+I
Sbjct: 435 EDCSIRPSSPTSVSHGSRPQSPAVPKKPSVTVSPLGLLCDPNLSI 479
>AL032634-4|CAA21599.1| 500|Caenorhabditis elegans Hypothetical
protein W01G7.5 protein.
Length = 500
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = -3
Query: 389 AKPTTNPRKSQSLAPRGPMQPPVYVS-PRTCAFDTELTI 276
AKP P + AP+ P PP S PR A TI
Sbjct: 55 AKPAPKPTPKSAPAPKSPKSPPARRSIPRAAATAANSTI 93
>AF256467-1|AAF71546.1| 690|Caenorhabditis elegans SEL-5B
serine/threonine kinase protein.
Length = 690
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -3
Query: 398 MRDAKPTTNPRKSQSLAPRGPMQPPVYVSPRTCAFDTELTII 273
MRD +NPR + +PR P PP+ S + + ++ I
Sbjct: 347 MRDG---SNPRNKRDSSPRNPEAPPIQSSSKMASLSQQVPSI 385
>AF256466-1|AAF71545.1| 1077|Caenorhabditis elegans SEL-5A
serine/threonine kinase protein.
Length = 1077
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -3
Query: 398 MRDAKPTTNPRKSQSLAPRGPMQPPVYVSPRTCAFDTELTII 273
MRD +NPR + +PR P PP+ S + + ++ I
Sbjct: 347 MRDG---SNPRNKRDSSPRNPEAPPIQSSSKMASLSQQVPSI 385
>AC006832-5|AAF39998.1| 513|Caenorhabditis elegans Hypothetical
protein ZK355.1 protein.
Length = 513
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -2
Query: 357 KSGTTRSHATTCVCF 313
+S TTRS+ATTCV F
Sbjct: 491 ESSTTRSYATTCVIF 505
>Z92796-5|CAB07233.1| 518|Caenorhabditis elegans Hypothetical
protein H25K10.6 protein.
Length = 518
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -3
Query: 146 QNVSFLTAFEPNTARHAYVFETT 78
+N+SFLT E T++H+Y+ + T
Sbjct: 266 ENLSFLTGLETITSKHSYLSKMT 288
>U23454-2|AAC46519.2| 368|Caenorhabditis elegans Hypothetical
protein C10A4.5 protein.
Length = 368
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -1
Query: 220 PGYTEAASIINHHPAKNSSPANIDAK 143
P YTEA ++I P + S+ A+I+++
Sbjct: 223 PSYTEAIAMIEQAPVQESNEASIESR 248
>AF077534-1|AAK71375.1| 1136|Caenorhabditis elegans Temporarily
assigned gene nameprotein 218, isoform a protein.
Length = 1136
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -3
Query: 386 KPTTNPRKSQSLAPRGPMQPPVYVSPRTCAFDT 288
KPT PR + PR ++ P P T FDT
Sbjct: 183 KPTPAPRSMSATLPRARLKTPPPPPPVTNQFDT 215
>AF003385-4|AAB54244.1| 333|Caenorhabditis elegans Hypothetical
protein R08F11.2 protein.
Length = 333
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +1
Query: 346 GARLWLFLGFVVGFASLIAACWILFANYVNASSSKHAW 459
G R ++F+GF +G+ A +F + SS H W
Sbjct: 149 GCRTYIFMGFAIGYGCYFA----IFTPPIVFSSKYHTW 182
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,829,004
Number of Sequences: 27780
Number of extensions: 301114
Number of successful extensions: 856
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 856
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -