Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP09_F_D04
(648 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024759-4|AAK68434.1| 356|Caenorhabditis elegans Hypothetical ... 31 0.93
Z96047-5|CAB09415.1| 379|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z69790-3|CAD56579.1| 1234|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z69790-2|CAA93653.2| 1271|Caenorhabditis elegans Hypothetical pr... 28 5.0
AF339882-1|AAK14396.1| 1329|Caenorhabditis elegans attractin pro... 28 5.0
AC024759-3|AAK68433.1| 355|Caenorhabditis elegans Hypothetical ... 28 6.6
AC024759-2|AAM97964.1| 376|Caenorhabditis elegans Hypothetical ... 28 6.6
AC024759-1|AAK73907.1| 376|Caenorhabditis elegans Hypothetical ... 28 6.6
Z68215-8|CAA92454.1| 318|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z50873-3|CAA90761.4| 531|Caenorhabditis elegans Hypothetical pr... 27 8.7
>AC024759-4|AAK68434.1| 356|Caenorhabditis elegans Hypothetical
protein Y37E11AR.4 protein.
Length = 356
Score = 30.7 bits (66), Expect = 0.93
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 536 DNDHHDSGLNVTWLGHCCSILLHHGVQYL 622
D+ H +SGL TWLGH ++ GV+++
Sbjct: 76 DDFHSESGLFATWLGHATVLVDLEGVKFV 104
>Z96047-5|CAB09415.1| 379|Caenorhabditis elegans Hypothetical
protein DY3.6 protein.
Length = 379
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 10 AAAIRDAKRYNCLCEFITFQILSK*PNRFPTTR 108
A A+ D +R+N +C+ + + K PN T R
Sbjct: 140 ARAVNDVRRFNFICKVVQILVEEKLPNLSATAR 172
>Z69790-3|CAD56579.1| 1234|Caenorhabditis elegans Hypothetical protein
F33C8.1b protein.
Length = 1234
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = +3
Query: 429 IACVVGLHRRRPGN-IKFYVLFAACRLV-LVFAGLVYL 536
+ VV + P N + F+V+FAAC +V LV AGL+++
Sbjct: 1124 VQIVVSFAQSPPINWVLFFVIFAACFIVLLVVAGLLWM 1161
>Z69790-2|CAA93653.2| 1271|Caenorhabditis elegans Hypothetical protein
F33C8.1a protein.
Length = 1271
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = +3
Query: 429 IACVVGLHRRRPGN-IKFYVLFAACRLV-LVFAGLVYL 536
+ VV + P N + F+V+FAAC +V LV AGL+++
Sbjct: 1161 VQIVVSFAQSPPINWVLFFVIFAACFIVLLVVAGLLWM 1198
>AF339882-1|AAK14396.1| 1329|Caenorhabditis elegans attractin protein.
Length = 1329
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = +3
Query: 429 IACVVGLHRRRPGN-IKFYVLFAACRLV-LVFAGLVYL 536
+ VV + P N + F+V+FAAC +V LV AGL+++
Sbjct: 1161 VQIVVSFAQSPPINWVLFFVIFAACFIVLLVVAGLLWM 1198
>AC024759-3|AAK68433.1| 355|Caenorhabditis elegans Hypothetical
protein Y37E11AR.3a protein.
Length = 355
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 536 DNDHHDSGLNVTWLGHCCSILLHHGVQYL 622
D+ H +S L TWLGH ++ GV+++
Sbjct: 74 DDFHSESDLFATWLGHATVLVDLEGVKFV 102
>AC024759-2|AAM97964.1| 376|Caenorhabditis elegans Hypothetical
protein Y37E11AR.3c protein.
Length = 376
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 536 DNDHHDSGLNVTWLGHCCSILLHHGVQYL 622
D+ H +S L TWLGH ++ GV+++
Sbjct: 95 DDFHSESDLFATWLGHATVLVDLEGVKFV 123
>AC024759-1|AAK73907.1| 376|Caenorhabditis elegans Hypothetical
protein Y37E11AR.3b protein.
Length = 376
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 536 DNDHHDSGLNVTWLGHCCSILLHHGVQYL 622
D+ H +S L TWLGH ++ GV+++
Sbjct: 95 DDFHSESDLFATWLGHATVLVDLEGVKFV 123
>Z68215-8|CAA92454.1| 318|Caenorhabditis elegans Hypothetical
protein C53B4.6 protein.
Length = 318
Score = 27.5 bits (58), Expect = 8.7
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
Frame = +3
Query: 372 VGFVLLMTIVINAAWLLVNIACVVGLHRRRPGNIKFYVLFAACRLVLVFAG---LVYLTM 542
VG LL +I +A+L + H + + FYV F + L F G +
Sbjct: 163 VGLALLSFALILSAYLGLYQETFYQKHGKHNEEMMFYVHFLSIPL-FAFVGDDMVPAFHA 221
Query: 543 TITTPALMLHGLDIAVASYFITVY 614
+TP+ ++ GLD V S ++ ++
Sbjct: 222 AYSTPSFVIAGLDTVVPSAWVYIF 245
>Z50873-3|CAA90761.4| 531|Caenorhabditis elegans Hypothetical
protein F17E5.2 protein.
Length = 531
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 291 IDLEELSEPTTTLQPAQQSSESPLLSG 371
IDL+ + E T+QP + S PL+ G
Sbjct: 23 IDLKNIGEHARTVQPFKTSKHQPLIQG 49
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,706,471
Number of Sequences: 27780
Number of extensions: 283749
Number of successful extensions: 768
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 767
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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