Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP09_F_C16
         (653 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0802 - 21614891-21615195,21615637-21615823,21615939-216161...    36   0.028
11_04_0100 + 13465369-13465371,13465464-13465647,13466506-13466528     33   0.15 
05_06_0013 + 24852262-24852264,24852717-24852900,24853449-24853471     33   0.15 
10_05_0025 + 8215685-8215716,8215859-8215937,8216340-8216412,821...    27   9.9  
08_01_0114 - 900530-901191,901269-901338,901536-901640,901721-90...    27   9.9  

>07_03_0802 -
           21614891-21615195,21615637-21615823,21615939-21616154,
           21616669-21616872,21617336-21617569,21617670-21617763,
           21618844-21618890,21619293-21619309,21620183-21620459
          Length = 526

 Score = 35.9 bits (79), Expect = 0.028
 Identities = 15/24 (62%), Positives = 20/24 (83%)
 Frame = +3

Query: 243 LLFQPREIKDIKDFLIKARRKDAK 314
           L  QP++I +IKDFL+ ARRKDA+
Sbjct: 28  LATQPKQIHEIKDFLLTARRKDAR 51


>11_04_0100 + 13465369-13465371,13465464-13465647,13466506-13466528
          Length = 69

 Score = 33.5 bits (73), Expect = 0.15
 Identities = 13/20 (65%), Positives = 18/20 (90%)
 Frame = +3

Query: 255 PREIKDIKDFLIKARRKDAK 314
           P++I +IKDFL+ ARRKDA+
Sbjct: 2   PKQIHEIKDFLLTARRKDAR 21


>05_06_0013 + 24852262-24852264,24852717-24852900,24853449-24853471
          Length = 69

 Score = 33.5 bits (73), Expect = 0.15
 Identities = 13/20 (65%), Positives = 18/20 (90%)
 Frame = +3

Query: 255 PREIKDIKDFLIKARRKDAK 314
           P++I +IKDFL+ ARRKDA+
Sbjct: 2   PKQIHEIKDFLLTARRKDAR 21


>10_05_0025 +
           8215685-8215716,8215859-8215937,8216340-8216412,
           8216712-8216864,8217456-8217569,8217649-8217776,
           8219004-8219099,8219479-8219601,8219694-8219810,
           8219983-8220104,8220439-8220508
          Length = 368

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 11/35 (31%), Positives = 22/35 (62%)
 Frame = +3

Query: 486 IFIWDRLAGQFS*YNLDIQYLLSNFFQRHKS*TKS 590
           +++W R+AG F     DI  L+++F++  ++  KS
Sbjct: 34  MYVWPRIAGYFCCKQYDIILLIAHFYRALRTRMKS 68


>08_01_0114 -
           900530-901191,901269-901338,901536-901640,901721-901831,
           901912-902016,902245-902391,903273-903354,903445-903786,
           903873-904177,904259-904435,904799-904852,905171-905254,
           905855-905968,906048-906321,907552-907926,908003-908267,
           908352-908538,908615-909052,909895-909966,910037-910630,
           911471-911623,911700-911828,912326-912657,912705-912840,
           913046-913491,913580-915087,915169-915431,915622-915738,
           915844-916014,916743-916845,916930-916988,918360-918461,
           918560-918649,918727-918877,919745-919830,919926-920102,
           920915-920978,921859-922008,923132-923211,923311-923376,
           924540-924747,925502-925575,925761-925848,926140-926312,
           926541-926609,926698-926741,927074-927167,927290-927366,
           927475-927552,927992-928085
          Length = 3314

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = +1

Query: 214 TLYSLFSNLCYYFSR 258
           TLYS F NLC+Y+++
Sbjct: 820 TLYSAFINLCFYYAK 834


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,136,255
Number of Sequences: 37544
Number of extensions: 180666
Number of successful extensions: 228
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 228
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)